Mp2g26760



Description

Annotation

Database ID Description
Gene3D G3DSA:3.60.120.10 Anthranilate synthase
Coils Coil Coil
SUPERFAMILY SSF56322 ADC synthase
PRINTS PR00095 Anthranilate synthase component I signature
PANTHER PTHR11236 AMINOBENZOATE/ANTHRANILATE SYNTHASE
NCBIfam TIGR00564 anthranilate synthase component I
FunFam G3DSA:3.60.120.10:FF:000003 Anthranilate synthase component 1
Pfam PF00425 chorismate binding enzyme
Pfam PF04715 Anthranilate synthase component I, N terminal region
KEGG K01657 anthranilate synthase component I [EC:4.1.3.27]
KOG KOG1223 Isochorismate synthase; [E]
MapolyID Mapoly0025s0009 -
GO GO:0009058 biosynthetic process
GO GO:0004049 anthranilate synthase activity
GO GO:0000162 tryptophan biosynthetic process

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Auxin-biosynthesis (anthranilate synthase) gene acting downstream of MpERF15; its wound-induced expression is significantly reduced in Mperf15ko at 4 h post-wounding by RT-qPCR.

1 core 0 peripheral

Liang, Y., et al. (2022) · Science Advances  research experimental subject
Auxin-biosynthesis (anthranilate synthase) gene acting downstream of MpERF15; its wound-induced expression is significantly reduced in Mperf15ko at 4 h post-wounding by RT-qPCR.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g26760.1 chr2:32984913..32990007 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g26760.2 chr2:32984929..32989991 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g26760 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g26760 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.