Mp3g00170



Description

Annotation

Database ID Description
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SUPERFAMILY SSF52058 L domain-like
Gene3D G3DSA:1.10.8.430 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR48182 PROTEIN SERAC1
Pfam PF00931 NB-ARC domain
PRINTS PR00364 Disease resistance protein signature
KEGG K23504 protein SERAC1
KOG KOG4658 Apoptotic ATPase; N-term missing; [T]
KOG KOG2029 Uncharacterized conserved protein; N-term missing; [S]
MapolyID Mapoly0007s0015 -
GO GO:0043531 ADP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpNBS-LRR4 NBS genes Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g00170.1 chr3:481630..488673 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g00170 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g00170 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.