Mp3g00930



Description

Annotation

Database ID Description
Gene3D G3DSA:1.20.120.350 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00520 Ion transport protein
SUPERFAMILY SSF81324 Voltage-gated potassium channels
Pfam PF03493 Calcium-activated BK potassium channel alpha subunit
PRINTS PR01449 Calcium-activated BK potassium channel alpha subunit signature
Coils Coil Coil
Gene3D G3DSA:3.40.50.720 -
Gene3D G3DSA:1.10.287.70 -
Pfam PF21014 Ca2+-activated K+ channel Slowpoke, TrkA_C like domain
PRINTS PR00169 Potassium channel signature
PANTHER PTHR10027 CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
KOG KOG1420 Ca2+-activated K+ channel Slowpoke, alpha subunit; [PT]
MapolyID Mapoly0007s0089 -
GO GO:0055085 transmembrane transport
GO GO:0005216 monoatomic ion channel activity
GO GO:0006813 potassium ion transport
GO GO:0005267 potassium channel activity
GO GO:0071805 potassium ion transmembrane transport
GO GO:0006811 monoatomic ion transport
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpBK1 BK channel Published

Transcript models

Transcript ID Location Sequences Extract region
Mp3g00930.1 chr3:1177049..1186392 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g00930 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g00930 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.