Mp3g01170
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSitePatterns | PS00503 | Pectinesterase signature 2. |
| Gene3D | G3DSA:2.160.20.10 | - |
| PANTHER | PTHR31321 | ACYL-COA THIOESTER HYDROLASE YBHC-RELATED |
| FunFam | G3DSA:2.160.20.10:FF:000008 | Pectinesterase |
| Pfam | PF01095 | Pectinesterase |
| SUPERFAMILY | SSF51126 | Pectin lyase-like |
| KEGG | K01051 | pectinesterase [EC:3.1.1.11] |
| MapolyID | Mapoly0007s0111 | - |
| GO | GO:0030599 | pectinesterase activity |
| GO | GO:0045490 | pectin catabolic process |
| GO | GO:0042545 | cell wall modification |
| GO | GO:0052689 | carboxylic ester hydrolase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCE8.7 | Cell wall related protein | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Carbohydrate esterase family 8 (CE8, pectin methylesterase) identified by MS as a major abundant cell wall protein, consistent with homogalacturonan in the wall (Table 3).
1 core 0 peripheral
Kolkas, H., et al. (2022)
· Frontiers in Plant Science research experimental subject
Carbohydrate esterase family 8 (CE8, pectin methylesterase) identified by MS as a major abundant cell wall protein, consistent with homogalacturonan in the wall (Table 3).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g01170 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g01170.1 ATTGAGATTG GGAGTGTGGG GTAGCCCGAG CCGCAGACGC AACCCCCCGC AGCAGCAGCA GCAGCAGCAG CTTGACTCGG ATTGATCCTC CTTTAATTAA GGAGTAGACG AGGACGTTTC TCTCGAAGAC GCCCCTCTTT TCATATAGTC GCGTAGTCGA TGCTCGCTCG TAGTGTGTAG TCAGCACACT CTGCTGCATT TCCCACTCCG CTCGCTCGAG ATCGCTCGCC CTGTCTCAAG GTACTGACTG AATACAAGGC TCTGTGTGCC AATCCTAGTC GTTGCATTCT CGTTGTTTGC TTCCTGCACT TGCGTGGATT TTTCTCCCCC GTCTGCTCCC CTTCTGAACG AACTCGCGGA CCCGAAGCTC CACCATGTCC TCGAAACGCT TGGCGAGACT AGCCCTCGTC CTCCTCGACT GACTGAGCTC TCGCCAGTCA ATTCCGCCAC TGACAGTCGA CGGCCTCTCG CCTCGTAGGG AGGGAGGGAG GCAGGAAGGG AGGGCATCGC CAGCTCCACT GTCAGTCACT AATGGAACTC GACTCACCAA ACCCAAAACC CGGCTCTAGC TAGACTCGTA GTGTGACCAT CTCCCGAGGC TCGACGCAGG CCAAGGGGAG CGACAGAGAG GAAACGCGGT GAGCTGCGCA TTTTGGCGAG ATTTTGCCCA AGTAAGAGAC CATGCCTTGA TAGGACGCTG TGAGCTTGGA GAGTCGAACT GCATTGTCAC GTACATGCCC GGTCTCGTGG TGGTCTGTTC CGAATGGAGA GGTGAGGAGT GCGGGGATTG GACTGGACTG TGCGGGACGG GACGGGACGG GGCGGGGCGG GGCTGGGCGG GGCCAGATGA GGAAGCTAGT GCACCCAGTT CTAACTCGAA GTTGCAGGCG TGGTGTTTTA TTTGGGTCTC ATTTCGCCAA GGTCCGCAGT CGAGCTCGCT TTCCAGGTCG TCAGAGCCGG ATCCCAAGGA TGACAGCCAT CGGAGGGCCG TCGGTTAGAC TCGAAGAATT CTCTCCCCTT GAGCCCCCGA AACGAAACGG ATGGCGCCCC CGGTCGGTGG CTAAGCCGTT ATCTCAGGCC AGGTCGCAGG TGTCGTCCCC AATTCTCGTC AGTGAATAAT AACATTGCAG AGGACGGACG TTTTCAGAAT GGAGAACGCC TGCAGCTCCC CTAACGCTTT CTTATCTAAC CTCTCCTCTC TCCTCCGCAT CCGACTGTCT GTATTTCTGT CTGCGATGTC TCTCGTGTAC ATTGACATTG CTCCGTGACG AGTTCCACTG CCATCGGTCG TCAGTGGGCA CTTTGATTCG GCTCTCGTTC GTGAAATCAG AGCATGAGGA ATTCTGTGCG CGTCGAGTCC ATGGCCTGAC GAGCATTGCT GTGGGTCCGT TCGCTCTGCA GGGTGAAAAA TGGCAGGATC CTCGGGAACG AGAAGGCTGT GCATTGCAGC GCTGCTGCTG GTGTGTGCGG TCGTCGCGGT GTCCGCGCTG TCGGCCGAGG AGGAGTACGA TGAGTGGCTG CACTACATTT CTAAAACCTC TGATCCTGTC TCCGACGAGA CCGTCAACTC GTTGAATGCC AAGATTCTGA ACAAGCAGTC GATCACCAGC GACATTAGCA GCTCGCTGTC GGGCTACGAC GCATGGCTGG CGAAGCAGAA GGTGCTGGCC GCCAGCAAGC CCGATGTCCA GCCCGCCGAG CAGAGGAGGC ACGGCGGCAA CTCGAAGACC GAGGAAGTCA TTTACGTGGC CAAGGACGGA AGCGGTGACT TCTACACCAT CGCTGGAGCA TTGGCCTCCA TTCCCGTTTA CAACAGCGCC CGAAAGACTC TCTTCATCAA GGAAGGAGTT TACGAGTAAG TACTGCTTCA CTCACTCACT CACAATCCGA CTGTCGATGA GATTTGGGAA TGACAGTCAC GCTCGAGTGC ACACGTGACG AGCTGTGAAG TGGGAGCTGA GTGAGTTCAT CGTGTCTGTG AACAGGGAGA AGATCGTGAT TCCATCGTCG CAGAAGTACA TCACATTCAT CGGAGAGGGT GCCGACAAGA CCGTGATCAC CGGACATGCA ACCGCAGGAG ACGAGTACGG AGACGCATTG CTGAAAACAT ACCGCAGTGC AACCGTGGGA GTGAACTCCG ACCACTTCAT CGCCAAGAAT ATCCGCTTCG AGGTGAGGCA GCTTTGACTG TGCCGCTCGT GCTCTTGTCT TGTTCGTGTC GTACCCTCGA TCATCGAGTT ACAGTACCAG CCGGCTGCAG AGTTACAGCG TGGTTATTAT GGTCGTGTTT GTGTGGAGTT TCAATCTCTT GCAGCATTGG AAGGCTTGCT TCTGACTCTC GTTGCTGCAG AACACCTCGC CTCCCCCGGA GCCAGGAGCT ATCGGAAAGC AAGCAGTGGC CTTCAGAATC AGCGGAGACA AGGCCGCGTT TTACAATGTG GCATTCCTCG GAGCTCAGGA TACCCTCTAC GCTCACCAGG GTCGTCACTA CTTCCAGAAC GCCTACATTC AAGGCTCCAT CGATTTCGTC TTCGGCAACG GGAAATCGTA CTTCAAGGTC AGTCCATCTC GCTCGTCAGC TCGCGTCGAG CTCGACTGTA ATCGCTGGTG AAGTTTCTCG CTTCGGTTGC TCTTGTTGGG CTGAAGACTG CGCTGCTTAA TGTCTGCTGT GGATGGATGG ATGTGCAGGA CTCCCACTTG CACAGCATTG CGGACAGCTT CGGGTCGCTG ACGGCGCAGA AGAGGAACGA GTCCGACATG AACACGGGCT TCTCCTTCGT CAACTGCAAG ATCGACGGGA CCGGAATCAT TTACCTCGGC CGTGCGTGGG GCAATTACTC GCGCGTCGTC TACTCATGGA GCTACTTGAA CGACATGATC ATCCCCGAAG GCTGGCAAGA TTGGGGTATC CCAGCTCGTC AAGGGTGAGT ACGACCGAGC TTTTGTTGCA TCTCTCCTCT CAATGCAATA CAATGCATTG CATTGCAATG CGATTTGATG CGAATCTCAG CGATGCGTCG ATTTTGATCG TGCTTGTGGT GCTCGCAGAA TGGTGTATTA CGGGCAGTAC GAGTGCTCGG GACCCGGCGC TGACACGAGC AAGAGAGTGC CATGGGCGAA GTCCCTCTCA TACGAGGACG CGAAGCCCTT CCTCACCGAC TCCTTCGTGA ACGGACACAC TTGGATCACA CCGGAGGACG AAATCCATCC TTGAGAGTGC ATCTCGGCGC GCGAACCAGC GCCGAGGCTG AGGGATGCCG AGCTCGTGGC AACACTGAAA CGATTTGCGG TCCTTCTCAT CATCGTCCGC TCGAGCCGAC GCTCTGATTA GCATGTTGAA TCTTCGCGCG TCGACCCTGA GCCGGATCTG AAGAACGAGA GTGTCGCACG GGGGCGAGCT TCCCAGTAAT ATAATGTATA AATTGTGTGG AGAAGAACAC CATTCAATAT TATTCTGACA ACATTGTCCA TAAGGAGACG ATTTTCGTGG GAGAGTGAGG AGTGCGTGCG AGTGTGGTCC TTCAGGAGTA GAGAGAGAGA GAGGTTCGTC GATCTCGTAG CGGTTTTGAG TACAGGCATC TGGTCCTAGA TCTCTCGATG ATACGAGGTC CGTCTCCGCT GTTACCACCA ACATTTGCTG AGCGGGGAGA TTTTTATCAT GTACGTAGAT AAAAGAGCGC TGGCTCATCG TTCCGATTGA ACAAATCACG CTTACTCTTT GAGTCCAGCT CCGAACTTGA ACATTTTGAG TTCTGTAATT TGATGCAATA CAGTGTTGAA TTGAAACACA CATTCTGTTC ACTGTC |
mRNA UTR + CDS |
| >Mp3g01170.1 ATTGAGATTG GGAGTGTGGG GTAGCCCGAG CCGCAGACGC AACCCCCCGC AGCAGCAGCA GCAGCAGCAG CTTGACTCGG ATTGATCCTC CTTTAATTAA GGAGTAGACG AGGACGTTTC TCTCGAAGAC GCCCCTCTTT TCATATAGTC GCGTAGTCGA TGCTCGCTCG TAGTGTGTAG TCAGCACACT CTGCTGCATT TCCCACTCCG CTCGCTCGAG ATCGCTCGCC CTGTCTCAAG GGTGAAAAAT GGCAGGATCC TCGGGAACGA GAAGGCTGTG CATTGCAGCG CTGCTGCTGG TGTGTGCGGT CGTCGCGGTG TCCGCGCTGT CGGCCGAGGA GGAGTACGAT GAGTGGCTGC ACTACATTTC TAAAACCTCT GATCCTGTCT CCGACGAGAC CGTCAACTCG TTGAATGCCA AGATTCTGAA CAAGCAGTCG ATCACCAGCG ACATTAGCAG CTCGCTGTCG GGCTACGACG CATGGCTGGC GAAGCAGAAG GTGCTGGCCG CCAGCAAGCC CGATGTCCAG CCCGCCGAGC AGAGGAGGCA CGGCGGCAAC TCGAAGACCG AGGAAGTCAT TTACGTGGCC AAGGACGGAA GCGGTGACTT CTACACCATC GCTGGAGCAT TGGCCTCCAT TCCCGTTTAC AACAGCGCCC GAAAGACTCT CTTCATCAAG GAAGGAGTTT ACGAGGAGAA GATCGTGATT CCATCGTCGC AGAAGTACAT CACATTCATC GGAGAGGGTG CCGACAAGAC CGTGATCACC GGACATGCAA CCGCAGGAGA CGAGTACGGA GACGCATTGC TGAAAACATA CCGCAGTGCA ACCGTGGGAG TGAACTCCGA CCACTTCATC GCCAAGAATA TCCGCTTCGA GAACACCTCG CCTCCCCCGG AGCCAGGAGC TATCGGAAAG CAAGCAGTGG CCTTCAGAAT CAGCGGAGAC AAGGCCGCGT TTTACAATGT GGCATTCCTC GGAGCTCAGG ATACCCTCTA CGCTCACCAG GGTCGTCACT ACTTCCAGAA CGCCTACATT CAAGGCTCCA TCGATTTCGT CTTCGGCAAC GGGAAATCGT ACTTCAAGGA CTCCCACTTG CACAGCATTG CGGACAGCTT CGGGTCGCTG ACGGCGCAGA AGAGGAACGA GTCCGACATG AACACGGGCT TCTCCTTCGT CAACTGCAAG ATCGACGGGA CCGGAATCAT TTACCTCGGC CGTGCGTGGG GCAATTACTC GCGCGTCGTC TACTCATGGA GCTACTTGAA CGACATGATC ATCCCCGAAG GCTGGCAAGA TTGGGGTATC CCAGCTCGTC AAGGAATGGT GTATTACGGG CAGTACGAGT GCTCGGGACC CGGCGCTGAC ACGAGCAAGA GAGTGCCATG GGCGAAGTCC CTCTCATACG AGGACGCGAA GCCCTTCCTC ACCGACTCCT TCGTGAACGG ACACACTTGG ATCACACCGG AGGACGAAAT CCATCCTTGA GAGTGCATCT CGGCGCGCGA ACCAGCGCCG AGGCTGAGGG ATGCCGAGCT CGTGGCAACA CTGAAACGAT TTGCGGTCCT TCTCATCATC GTCCGCTCGA GCCGACGCTC TGATTAGCAT GTTGAATCTT CGCGCGTCGA CCCTGAGCCG GATCTGAAGA ACGAGAGTGT CGCACGGGGG CGAGCTTCCC AGTAATATAA TGTATAAATT GTGTGGAGAA GAACACCATT CAATATTATT CTGACAACAT TGTCCATAAG GAGACGATTT TCGTGGGAGA GTGAGGAGTG CGTGCGAGTG TGGTCCTTCA GGAGTAGAGA GAGAGAGAGG TTCGTCGATC TCGTAGCGGT TTTGAGTACA GGCATCTGGT CCTAGATCTC TCGATGATAC GAGGTCCGTC TCCGCTGTTA CCACCAACAT TTGCTGAGCG GGGAGATTTT TATCATGTAC GTAGATAAAA GAGCGCTGGC TCATCGTTCC GATTGAACAA ATCACGCTTA CTCTTTGAGT CCAGCTCCGA ACTTGAACAT TTTGAGTTCT GTAATTTGAT GCAATACAGT GTTGAATTGA AACACACATT CTGTTCACTG TC |
CDS |
| >Mp3g01170.1 ATGGCAGGAT CCTCGGGAAC GAGAAGGCTG TGCATTGCAG CGCTGCTGCT GGTGTGTGCG GTCGTCGCGG TGTCCGCGCT GTCGGCCGAG GAGGAGTACG ATGAGTGGCT GCACTACATT TCTAAAACCT CTGATCCTGT CTCCGACGAG ACCGTCAACT CGTTGAATGC CAAGATTCTG AACAAGCAGT CGATCACCAG CGACATTAGC AGCTCGCTGT CGGGCTACGA CGCATGGCTG GCGAAGCAGA AGGTGCTGGC CGCCAGCAAG CCCGATGTCC AGCCCGCCGA GCAGAGGAGG CACGGCGGCA ACTCGAAGAC CGAGGAAGTC ATTTACGTGG CCAAGGACGG AAGCGGTGAC TTCTACACCA TCGCTGGAGC ATTGGCCTCC ATTCCCGTTT ACAACAGCGC CCGAAAGACT CTCTTCATCA AGGAAGGAGT TTACGAGGAG AAGATCGTGA TTCCATCGTC GCAGAAGTAC ATCACATTCA TCGGAGAGGG TGCCGACAAG ACCGTGATCA CCGGACATGC AACCGCAGGA GACGAGTACG GAGACGCATT GCTGAAAACA TACCGCAGTG CAACCGTGGG AGTGAACTCC GACCACTTCA TCGCCAAGAA TATCCGCTTC GAGAACACCT CGCCTCCCCC GGAGCCAGGA GCTATCGGAA AGCAAGCAGT GGCCTTCAGA ATCAGCGGAG ACAAGGCCGC GTTTTACAAT GTGGCATTCC TCGGAGCTCA GGATACCCTC TACGCTCACC AGGGTCGTCA CTACTTCCAG AACGCCTACA TTCAAGGCTC CATCGATTTC GTCTTCGGCA ACGGGAAATC GTACTTCAAG GACTCCCACT TGCACAGCAT TGCGGACAGC TTCGGGTCGC TGACGGCGCA GAAGAGGAAC GAGTCCGACA TGAACACGGG CTTCTCCTTC GTCAACTGCA AGATCGACGG GACCGGAATC ATTTACCTCG GCCGTGCGTG GGGCAATTAC TCGCGCGTCG TCTACTCATG GAGCTACTTG AACGACATGA TCATCCCCGA AGGCTGGCAA GATTGGGGTA TCCCAGCTCG TCAAGGAATG GTGTATTACG GGCAGTACGA GTGCTCGGGA CCCGGCGCTG ACACGAGCAA GAGAGTGCCA TGGGCGAAGT CCCTCTCATA CGAGGACGCG AAGCCCTTCC TCACCGACTC CTTCGTGAAC GGACACACTT GGATCACACC GGAGGACGAA ATCCATCCTT GA |
Protein |
| >Mp3g01170.1 MAGSSGTRRL CIAALLLVCA VVAVSALSAE EEYDEWLHYI SKTSDPVSDE TVNSLNAKIL NKQSITSDIS SSLSGYDAWL AKQKVLAASK PDVQPAEQRR HGGNSKTEEV IYVAKDGSGD FYTIAGALAS IPVYNSARKT LFIKEGVYEE KIVIPSSQKY ITFIGEGADK TVITGHATAG DEYGDALLKT YRSATVGVNS DHFIAKNIRF ENTSPPPEPG AIGKQAVAFR ISGDKAAFYN VAFLGAQDTL YAHQGRHYFQ NAYIQGSIDF VFGNGKSYFK DSHLHSIADS FGSLTAQKRN ESDMNTGFSF VNCKIDGTGI IYLGRAWGNY SRVVYSWSYL NDMIIPEGWQ DWGIPARQGM VYYGQYECSG PGADTSKRVP WAKSLSYEDA KPFLTDSFVN GHTWITPEDE IHP |