Mp3g01650
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF00544 | Pectate lyase |
| PANTHER | PTHR31683 | PECTATE LYASE 18-RELATED |
| SUPERFAMILY | SSF51126 | Pectin lyase-like |
| SMART | SM00656 | amb_all |
| PRINTS | PR00807 | Pollen allergen Amb family signature |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Gene3D | G3DSA:2.160.20.10 | - |
| KEGG | K01728 | pectate lyase [EC:4.2.2.2] |
| MapolyID | Mapoly0007s0157 | - |
| GO | GO:0030570 | pectate lyase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPL1.4 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g01650 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g01650.1 GCGACGGCCA AACCAGCTTT GGCGGGGGAG TGTGGAATGT CGACAGCTGC ATCGTCTAAG TGAGTTCAGG ACTTTCCACG ATGCTGTCAG TGACAAAGCA TGGACCTTTG CTCTGTGGTG GGCAGCAGTG CAGCTGTGCA GCAGAGTGAC TTGTCAGCGC AATTTTCTCT CGTTCCATTC TATGCACCTC TCGGACTCGC ATGCTGCGGC AGCACATTGT GGCATCGGTG ATCGAGCGTG CAGAGAAGGG CAGAGTGCCA AGAATTTGTG TTTCAATGGA TTTGAGTCTG ATCGCCCCCA GGTCTGTGAG GAAGTGATGA TGGTGATGAA TTGGAAACGG TAGGTTTGCT GCTTGAGTAG CTAGAATTTG ATGGAGAAGT TGATCAAGTC TCCCGGAGGA GAAGCTGTTG AACCTTGTGA TTATTGTTGC GTCCTTGGCG GAGAGGAATA GAAGGCGTTC GAGTCATTCT CTTCCGAAGT GTACATTTTT TTTCGCACTC AAGTTTTGGA GGAGCATGTT TACTGCAACA AGAGGAGATC GGTGGTTTAG ATTTTTGACT GCTACTCAAT TCCCACATCA CATCTAGTTT CGGGTATTTG AGGATCATTG ATTATGCTTG GGTGCTGTTG TGGGAGAAAG GGTGATACTA AAAATCACCG ACCATCTCCC AGTTCAACTC CTGCTACTTT GGGACCTCCC TTTCAACCTC CGTCTCAGAA TTGGCAGGGC GCGGGCTATT TCATGCCGTA TAGCACCATG GGGGTTGAAC CTTATGGCAA TGTCGACCGA TGCATGAGGG CTCTAGCTGG TGGAGCCGAA GGCTTTGGCC ATAGTGCAAT CGGCGGTCTA AATGGCGAAA TTTACCACGT TACCTCGCTC GCAGGTACAC TTCTCTTGTG CTTGCTTGTT GAATTGAAGA GATTGCATTC ACAGCCCCAC AATTTGAATT TTTTAAAGTT TTCCAAAGAT GGAGTAAATG ATTTCAACTT CTCTGGAAAG AAGCAAGTGT TATGAGTATG TAACCGTGCA CTAGAAATGC GCATGTATCC AAAAGGTACA ACTACGATGT GCTCGACCCT CGTTAGAAAG GATCCTACTG AATAACGATC TTGGAGAGTG CATATAAAGA CTGCTGGCGT ATTTCTGCTC AAGTCAGTCG TGCTGGTCTG GCTGACAACG TTATCAAGCG GATAGTGTTC ACCAGCCGTC ATCGCATTTG AAGGCTACAA ACTTGTATAC ATAATCCCAT GTCTCCAAAC TCCTTTCTAG CTCCTAAAAA ATGCAGGGCT TTTTTTTGTT TTGGCCTAGA AATATATTTC TGCTAGCCAC TAGGAGGAGC TTGCACAAAC TTTTCACGAG GATAATCTCG AATGTATCTT GCTTTAGGCC AAGTTAACAT TTCTCGTAGC TGTGCCCAGT TTAGACATCC AACCTCTTAA GAACTATGCA TAGCCTTAAT TTTAATCAAG GGGGATCGAC GATGTCATTT CTCACTTCTT TAATGATATT CTATATTACG ATATAGATTA CATCAAAGCA TATTAACTCG TGAAAGCTCT TCAATGATTA CTGCAGCCAC AATGCTTTGG GTTTTATCCT CTCCTTCAAC CGCGTCATTC CTGTCTCCTC ATTAGCTTTC GTCCGAAAGA AACCGGTTGT CCTAAGATTC ATAAGTATCA TAAGGAGAAA CTGTGAAACG ATTCCTGCTT ACTCTCTGGC TTTATTTTGG CAGATCAGGG ACCAGGCACA CTTCGTGACG CATGCAAACG AAAGGAACCC CTGTGGATCG TCTTTGAGGT ATCCGGCAAC ATTTGTTTGG AAAGTTACCT GCGAGTTACC AGTTACAAAA CCATTGATGG GAGGGGACAG CGAGTGAAAC TTATGGGGAA AGGTCTGCAA CTGAAGGAGT GTGAGCACGT TATCGTCTGC AACTTGGAGT TTGAAGGAGG ACGAGGTCAT GATGTGGATG GTATACAGAT GAAGCCTAAT TCCAAGCATA TATGGGTGGA CCGCTGTACC TTACAAGACT TTGATGACGG TCTGATTGAT ATTACACGCC AGTGTACAAA TATCACGATT TCAAGGTGCA GAACTTCATA TACTTAAGTT CACTTTGTAG GTGGTCGAAT CAGTCATAGC GTTTAGTTTC TCTTCTTCAC AAATCGCGCT AATAATGGCC TGATTATCCA CTTGTGAAGT AAAACATTTT AAGCGACGTA TTAATCAATA GGTGATCAAA GTCATAGCTC AATTCTGATT TTTCTGGAAG TTTATCTATT CTTCATCTTT ATTCCCCTGC AATGGCTCAT CCTGCACCAG TATTGAACAT CTCTTCTTCT ATATGGAGGC ATCTTCTTAG CTGCTGAATG CGTTGCAGGT GCCATTTCTT GAAGCACGAT AAGACCATGC TCATCGGGGC AGATCCCAAG CACGTTGAAG ATCGGTGTAT TCAAGTAACC ATTCACCACT GCTGGTTTGA TGGAACCAGA CAACGTCACC CGCGAGTTCG ATTTGGCAAA GTTCATCTCT ACAACAACTA TACGCGAAAC TGGGGTATCT ACGCAGTTTG TGCAAGTGTG GAGGCTCAGG TATGAACTGC TGAGTGAACT CGTGTATGTG GAAGGAAGAG CTCACAGACA TCTACTGTGG TTCTAGCTGC TTGAGCAGAA ATTCAACTCT CAGTATCTTA TGAGTTTGAA GAGCTCCGGC TGTCTGAGCA TTTATTAATC CAGAATAACC TGTCAGCGGG GAGATAGTGT TTCCCAACTT ACTCTTGCTT TATGGACTCA TTTTCGGTTA TGCTCTTTGT CTTTATGGTT ACAATATTAA AAGCTCTACT TGTTTTAAGT CATGTATTGG ACGAATGCCT AATTCGACCT CTATTCCTCC CACAGATTTT ATCACAGTGC AACATTTATG AGGCTGGCAC ACACAAGACT GCATTTGAGT ATTATACTGA GAAGGTGAGT TAGTGAGATG TCTTTCAGCA GGGTGAATAT GTCGTCATGT CGATGTACTT TAGGAAGTGA GGAATTTCGT ACGATATGAG AGCGTGTCAG GTTAGCAAAC TGATGTGATC TTGCCCTATC TGGTTGTCCA TGCAGGCAGG AGACAGGGAT CATGCAGTTT CTGGCAACAT CCGATCGGAG GGTGACATAT TTTTGAATGG AGCTAAAGGC GAACCTAGGA ACCCTCTGTC AGTGTTCAAA GCGGAGACTT TCTATCCACA TTGGACCCTT GAGCCTGCAG GGGATGGTTT GGTGAAGAAA ATTTGTAAGA GTGCTGGGTG GCAGAATTGT GAAAGGCCTG CCGACACTCC TGTCCGCTAA GTCCTCAAAA TTATTTGAAC AGTAGAAATA AAGTGAGCTT GTAAATCAGA CTCATACAAT AAAAATTGTG GCCGGGTTGG TAATTACTGA TGTTTTGTGT TTTGAGGCAT CTTGTAGTGG TCGG |
mRNA UTR + CDS |
| >Mp3g01650.1 GCGACGGCCA AACCAGCTTT GGCGGGGGAG TGTGGAATGT CGACAGCTGC ATCGTCTAAG TGAGTTCAGG ACTTTCCACG ATGCTGTCAG TGACAAAGCA TGGACCTTTG CTCTGTGGTG GGCAGCAGTG CAGCTGTGCA GCAGAGTGAC TTGTCAGCGC AATTTTCTCT CGTTCCATTC TATGCACCTC TCGGACTCGC ATGCTGCGGC AGCACATTGT GGCATCGGTG ATCGAGCGTG CAGAGAAGGG CAGAGTGCCA AGAATTTGTG TTTCAATGGA TTTGAGTCTG ATCGCCCCCA GGTCTGTGAG GAAGTGATGA TGGTGATGAA TTGGAAACGG TAGGTTTGCT GCTTGAGTAG CTAGAATTTG ATGGAGAAGT TGATCAAGTC TCCCGGAGGA GAAGCTGTTG AACCTTGTGA TTATTGTTGC GTCCTTGGCG GAGAGGAATA GAAGGCGTTC GAGTCATTCT CTTCCGAAGT GTACATTTTT TTTCGCACTC AAGTTTTGGA GGAGCATGTT TACTGCAACA AGAGGAGATC GGTGGTTTAG ATTTTTGACT GCTACTCAAT TCCCACATCA CATCTAGTTT CGGGTATTTG AGGATCATTG ATTATGCTTG GGTGCTGTTG TGGGAGAAAG GGTGATACTA AAAATCACCG ACCATCTCCC AGTTCAACTC CTGCTACTTT GGGACCTCCC TTTCAACCTC CGTCTCAGAA TTGGCAGGGC GCGGGCTATT TCATGCCGTA TAGCACCATG GGGGTTGAAC CTTATGGCAA TGTCGACCGA TGCATGAGGG CTCTAGCTGG TGGAGCCGAA GGCTTTGGCC ATAGTGCAAT CGGCGGTCTA AATGGCGAAA TTTACCACGT TACCTCGCTC GCAGATCAGG GACCAGGCAC ACTTCGTGAC GCATGCAAAC GAAAGGAACC CCTGTGGATC GTCTTTGAGG TATCCGGCAA CATTTGTTTG GAAAGTTACC TGCGAGTTAC CAGTTACAAA ACCATTGATG GGAGGGGACA GCGAGTGAAA CTTATGGGGA AAGGTCTGCA ACTGAAGGAG TGTGAGCACG TTATCGTCTG CAACTTGGAG TTTGAAGGAG GACGAGGTCA TGATGTGGAT GGTATACAGA TGAAGCCTAA TTCCAAGCAT ATATGGGTGG ACCGCTGTAC CTTACAAGAC TTTGATGACG GTCTGATTGA TATTACACGC CAGTGTACAA ATATCACGAT TTCAAGGTGC CATTTCTTGA AGCACGATAA GACCATGCTC ATCGGGGCAG ATCCCAAGCA CGTTGAAGAT CGGTGTATTC AAGTAACCAT TCACCACTGC TGGTTTGATG GAACCAGACA ACGTCACCCG CGAGTTCGAT TTGGCAAAGT TCATCTCTAC AACAACTATA CGCGAAACTG GGGTATCTAC GCAGTTTGTG CAAGTGTGGA GGCTCAGATT TTATCACAGT GCAACATTTA TGAGGCTGGC ACACACAAGA CTGCATTTGA GTATTATACT GAGAAGGCAG GAGACAGGGA TCATGCAGTT TCTGGCAACA TCCGATCGGA GGGTGACATA TTTTTGAATG GAGCTAAAGG CGAACCTAGG AACCCTCTGT CAGTGTTCAA AGCGGAGACT TTCTATCCAC ATTGGACCCT TGAGCCTGCA GGGGATGGTT TGGTGAAGAA AATTTGTAAG AGTGCTGGGT GGCAGAATTG TGAAAGGCCT GCCGACACTC CTGTCCGCTA AGTCCTCAAA ATTATTTGAA CAGTAGAAAT AAAGTGAGCT TGTAAATCAG ACTCATACAA TAAAAATTGT GGCCGGGTTG GTAATTACTG ATGTTTTGTG TTTTGAGGCA TCTTGTAGTG GTCGG |
CDS |
| >Mp3g01650.1 ATGCTTGGGT GCTGTTGTGG GAGAAAGGGT GATACTAAAA ATCACCGACC ATCTCCCAGT TCAACTCCTG CTACTTTGGG ACCTCCCTTT CAACCTCCGT CTCAGAATTG GCAGGGCGCG GGCTATTTCA TGCCGTATAG CACCATGGGG GTTGAACCTT ATGGCAATGT CGACCGATGC ATGAGGGCTC TAGCTGGTGG AGCCGAAGGC TTTGGCCATA GTGCAATCGG CGGTCTAAAT GGCGAAATTT ACCACGTTAC CTCGCTCGCA GATCAGGGAC CAGGCACACT TCGTGACGCA TGCAAACGAA AGGAACCCCT GTGGATCGTC TTTGAGGTAT CCGGCAACAT TTGTTTGGAA AGTTACCTGC GAGTTACCAG TTACAAAACC ATTGATGGGA GGGGACAGCG AGTGAAACTT ATGGGGAAAG GTCTGCAACT GAAGGAGTGT GAGCACGTTA TCGTCTGCAA CTTGGAGTTT GAAGGAGGAC GAGGTCATGA TGTGGATGGT ATACAGATGA AGCCTAATTC CAAGCATATA TGGGTGGACC GCTGTACCTT ACAAGACTTT GATGACGGTC TGATTGATAT TACACGCCAG TGTACAAATA TCACGATTTC AAGGTGCCAT TTCTTGAAGC ACGATAAGAC CATGCTCATC GGGGCAGATC CCAAGCACGT TGAAGATCGG TGTATTCAAG TAACCATTCA CCACTGCTGG TTTGATGGAA CCAGACAACG TCACCCGCGA GTTCGATTTG GCAAAGTTCA TCTCTACAAC AACTATACGC GAAACTGGGG TATCTACGCA GTTTGTGCAA GTGTGGAGGC TCAGATTTTA TCACAGTGCA ACATTTATGA GGCTGGCACA CACAAGACTG CATTTGAGTA TTATACTGAG AAGGCAGGAG ACAGGGATCA TGCAGTTTCT GGCAACATCC GATCGGAGGG TGACATATTT TTGAATGGAG CTAAAGGCGA ACCTAGGAAC CCTCTGTCAG TGTTCAAAGC GGAGACTTTC TATCCACATT GGACCCTTGA GCCTGCAGGG GATGGTTTGG TGAAGAAAAT TTGTAAGAGT GCTGGGTGGC AGAATTGTGA AAGGCCTGCC GACACTCCTG TCCGCTAA |
Protein |
| >Mp3g01650.1 MLGCCCGRKG DTKNHRPSPS STPATLGPPF QPPSQNWQGA GYFMPYSTMG VEPYGNVDRC MRALAGGAEG FGHSAIGGLN GEIYHVTSLA DQGPGTLRDA CKRKEPLWIV FEVSGNICLE SYLRVTSYKT IDGRGQRVKL MGKGLQLKEC EHVIVCNLEF EGGRGHDVDG IQMKPNSKHI WVDRCTLQDF DDGLIDITRQ CTNITISRCH FLKHDKTMLI GADPKHVEDR CIQVTIHHCW FDGTRQRHPR VRFGKVHLYN NYTRNWGIYA VCASVEAQIL SQCNIYEAGT HKTAFEYYTE KAGDRDHAVS GNIRSEGDIF LNGAKGEPRN PLSVFKAETF YPHWTLEPAG DGLVKKICKS AGWQNCERPA DTPVR |