Mp3g05470
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MapolyID | Mapoly0006s0020 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMIR529C | miRNA | Published |
Prevents development of reproductive organs (gametangia) and reproductive branches (gametangiophores) by repressing MpSPL2 expression during vegetative growth.
Associated Literature (AI-based literature mining, Beta-version)
MicroRNA; CRISPR/Cas9 mutation (mir529c) causes gamete production without inductive environmental signals — represses MpSPL2 to gate the reproductive transition.
1 core 1 peripheral
Tsuzuki, M., et al. (2019)
· Current Biology research experimental subject
MicroRNA; CRISPR/Cas9 mutation (mir529c) causes gamete production without inductive environmental signals — represses MpSPL2 to gate the reproductive transition.
Flores-Sandoval, E., et al. (2018b)
· Frontiers in Plant Science research experimental background
miR precursor identified by DESeq2 as activated by MpARF3 in co-expression/DGE analysis; not functionally mutated.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g05470 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g05470.1 CTGTTCTGAG ATTTTTTTCC AATGTGTCGG CGTTGCGCGC ATGTAGATGA AAGAGGAAGT AGATGAAGAG CACCAAAGCC GTTACCAGAA GAGAGAGAGC ACAGCCTTTG CCGTCTCTCC CGCTTCAGCC TGGGGCTTGA CAACTGGGGC TGTGCTATCC CTCTTCTGCT GCCGGATTTG TTGCATGTTA GTCCTTCCTC CGAATCTCGT ACGTGCGTTT GGGACTCCTA CGCCTGTCAA AGATGATTGG TATCCAGTAA CCCAGCGGAT GGGCCCAAAA GTAGGAGAGC TATTTGAACA TCACATGAGT TTATGGAGAG TCTTTTGAGA GAGAGAAAAA GGGAGAGAGG TAGAGAGGGA GAGAGATAGT TAGGGGCTTG AGTAGCAGTA TTTGTAGAAG ACATATTGCC AGCGATCATA AGAATCGGTC GAGTAAGCCC GAGTATTAAA TTTACAGTGC CTATATCTGT CGAGTGAAGG ATTAGACCTT CTCGTGGCAT CGTGCTTCAT AGTCTTCCTT CACAAGGCCA CGAGCGACAT TGGTCTCTGG ACTCTTGACT TGTCTGATTA CATGTTATGT GCACGACCCA GTTTCCTCCC ACTGGCAACA TCCTGCGATA CGCTTTCAAG CTACAGAAAC CATCACAACT GGCATGAGGG TTAATATCAC TCTCCATGTA TGTAGCTGTG AAGCCCCAGC AACATGTAAA CAATGGGCAT CCCACTAGGC AGTTCTCTTC TGACGGTATT TGTTCCTAAC GAGTTTTGTA GCCGAGATGA TGCTACTTTC GCCAGTTGCC AATCTGAGCC CAGGTCTGCA GCTGTATCGT GTCGCTCTTG AACGTCGCTT ACTGCTCTTA CTGCCCAATG GGTTCGGGTT TATCAGTACC AGTGTATCCT ACGGATGTGT TCACTTTCAT GGCTCAGTCG CATTCTGGAT ATTAGACCTT GAATACAGAC TGGATGTATC ATGGTGATGT GCTTATGTGC TCACATGTTG TTCGTTTGGC TTCTACATTG ATTCTTTTGA GATAGTCTAC TCGGTCGTTG AGGAGTGTAC ATCACGAGGC CGTTTCTCAG ATTGACCAGG CAGGCATTAT TCTCCAGAAT GCGCACTTTG GTGCATGCTT GTACAGAAAT ATATAGGCAG AATCTCGCAA CGGCGAGTGC TAATAACTAT CACGATAGAG CATAGGACTC ACACCCGTGA CTTAGTCGTC AGGCTATTTC CTAAAGCAGT TCACAAGCCA TACAATCTGA TAGCAGTGAA TAGCGAAGCA AATCTCATTG AGGCTGACAT TGTTTATCTA AGTTCATAGG GGTTTGTTGT TCTCTAGTTC GCAGAAGGTT TATTTACAAT TATCTCTGCG GTGTGTGCTA CTTTCCACTG GCTGGAACCC AGCTGTCTTC CTTCGATATA TGGAAGTTTA AGTGAGCATG ACCGCAACGT GCTTCTTAAT CCTTTACTTT TCCTTTTACG CAGTTACAAA AGTTTACCTT AAGTTACTGA ATTTATCAGT CACCTAGCTG CCGACAGTGT GATCTTTCGG ACTGTCTATT TGATGGACAT TTCAGCGAAC TGCAACGGAT TTTGGTATTT CCTCATCAGT TTTTGGAAGG AGCAACTTCC TGCATATTAA CTTTTGAACG AGTTGTCTGA TTGTTTCGAA ACAAGTGACA TGTCGGAAGA TGAGCAGCAC CTGGCACGAG GTATTTGCAC TTTGCAACCC ACGTCACGAT TAGAGGCATA TACGATCTGT GTGGGAATTT TGCATGATTA GTAAATAATT TGCTGATTGG CTTTAACTTA GAAAATCTTA TATTGTGTTT GTTGTCTAGG CTTGGACAGG AGAGCAGTAA TCCCACGAGG ATTATGTATC ACATTGTTGT CGTTTACAGG AATTTTAATA GTTAACGCTG TGTTCGAAAG TTACAACACC ATATTCGGTC CTTTTGTAGG TAGTTGTTGT TAGTGGCATC CAGTTTATCT TGAAGGCTGG ATGTAAGGGA CTACAGATCA TAGATGTGAT GAATTTCAAT TCGAATACGA CTAATTTCTA ATTACTGCTT CAAGCCATCT CAATAACAAT GTGTACGAGT ATTTATCAGT AGTACTGCTG TAAAGATTTA CTAATCGTCG AAGCTCTTCA TATGATTTGA TAACATTCAT CCATTACGTT TCATTACTTT TCATCACTGT ACCTTTAATA TGGGCTTGGT TTTGGAAGAT GTATTTTCAG ATCTTGACTC CTGGTGCTCC TGGTTCACAA CTGTGCATCA CCGAGAAATC TCAGTTTGCG TCCGGCTGTG ATTGGTTTGG GGTGAAGTCT TTCTCCTCTT GCCAGATTTG AATGGAGGGA CTGGATTCTA TCATGAAGGT GATCTTTAAA CCCGCCTTCA TATCGTTGCG GAGTCTTTTA AATAAAGAAG CTCACTTGTG AGCTTTTGAA AAGTCTGTTG CCTGGAAGAG TTTGTACCGC ACTGGATCTT CGAGGTTTTG GCTCATGGTT GTTTTTATTC TGAAGGGCCT GGTTACTATC TAGCTAGCCG CCGGATGCTA CTTGCCTATC TCAAAGGTAC ATCCTGCTAT GCTACAGATT TTTGTTGTTG CTATCTGAGT GCAGTCAAGT TGATTGCTAA AACTTCATTC ATTAACTCTG ATTATCGAGA TATAACCCGT TCAATTGGTT CATTCTACGA AATACAGATG GTTTGATTGT TTAAACCCGA AAACCTTAGA AATTTAGTTA GGAATTTATT TGTAACATTG GTCG |
mRNA UTR + CDS |
| >Mp3g05470.1 CTGTTCTGAG ATTTTTTTCC AATGTGTCGG CGTTGCGCGC ATGTAGATGA AAGAGGAAGT AGATGAAGAG CACCAAAGCC GTTACCAGAA GAGAGAGAGC ACAGCCTTTG CCGTCTCTCC CGCTTCAGCC TGGGGCTTGA CAACTGGGGC TGTGCTATCC CTCTTCTGCT GCCGGATTTG TTGCATGTTA GTCCTTCCTC CGAATCTCGT ACGTGCGTTT GGGACTCCTA CGCCTGTCAA AGATGATTGG TATCCAGTAA CCCAGCGGAT GGGCCCAAAA GTAGGAGAGC TATTTGAACA TCACATGAGT TTATGGAGAG TCTTTTGAGA GAGAGAAAAA GGGAGAGAGG TAGAGAGGGA GAGAGATAGT TAGGGGCTTG AGTAGCAGTA TTTGTAGAAG ACATATTGCC AGCGATCATA AGAATCGGTC GAGTAAGCCC GAGTATTAAA TTTACAGTGC CTATATCTGT CGAGTGAAGG ATTAGACCTT CTCGTGGCAT CGTGCTTCAT AGTCTTCCTT CACAAGGCCA CGAGCGACAT TGGTCTCTGG ACTCTTGACT TGTCTGATTA CATGTTATGT GCACGACCCA GTTTCCTCCC ACTGGCAACA TCCTGCGATA CGCTTTCAAG CTACAGAAAC CATCACAACT GGCATGAGGG TTAATATCAC TCTCCATGTA TGTAGCTGTG AAGCCCCAGC AACATGTAAA CAATGGGCAT CCCACTAGGC AGTTCTCTTC TGACGGTATT TGTTCCTAAC GAGTTTTGTA GCCGAGATGA TGCTACTTTC GCCAGTTGCC AATCTGAGCC CAGGTCTGCA GCTGTATCGT GTCGCTCTTG AACGTCGCTT ACTGCTCTTA CTGCCCAATG GGTTCGGGTT TATCAGTACC AGTGTATCCT ACGGATGTGT TCACTTTCAT GGCTCAGTCG CATTCTGGAT ATTAGACCTT GAATACAGAC TGGATGTATC ATGGTGATGT GCTTATGTGC TCACATGTTG TTCGTTTGGC TTCTACATTG ATTCTTTTGA GATAGTCTAC TCGGTCGTTG AGGAGTGTAC ATCACGAGGC CGTTTCTCAG ATTGACCAGG CAGGCATTAT TCTCCAGAAT GCGCACTTTG GTGCATGCTT GTACAGAAAT ATATAGGCAG AATCTCGCAA CGGCGAGTGC TAATAACTAT CACGATAGAG CATAGGACTC ACACCCGTGA CTTAGTCGTC AGGCTATTTC CTAAAGCAGT TCACAAGCCA TACAATCTGA TAGCAGTGAA TAGCGAAGCA AATCTCATTG AGGCTGACAT TGTTTATCTA AGTTCATAGG GGTTTGTTGT TCTCTAGTTC GCAGAAGGTT TATTTACAAT TATCTCTGCG GTGTGTGCTA CTTTCCACTG GCTGGAACCC AGCTGTCTTC CTTCGATATA TGGAAGTTTA AGTGAGCATG ACCGCAACGT GCTTCTTAAT CCTTTACTTT TCCTTTTACG CAGTTACAAA AGTTTACCTT AAGTTACTGA ATTTATCAGT CACCTAGCTG CCGACAGTGT GATCTTTCGG ACTGTCTATT TGATGGACAT TTCAGCGAAC TGCAACGGAT TTTGGTATTT CCTCATCAGT TTTTGGAAGG AGCAACTTCC TGCATATTAA CTTTTGAACG AGTTGTCTGA TTGTTTCGAA ACAAGTGACA TGTCGGAAGA TGAGCAGCAC CTGGCACGAG ATCTTGACTC CTGGTGCTCC TGGTTCACAA CTGTGCATCA CCGAGAAATC TCAGTTTGCG TCCGGCTGTG ATTGGTTTGG GGTGAAGTCT TTCTCCTCTT GCCAGATTTG AATGGAGGGA CTGGATTCTA TCATGAAGGT GATCTTTAAA CCCGCCTTCA TATCGTTGCG GAGTCTTTTA AATAAAGAAG CTCACTTGTG AGCTTTTGAA AAGTCTGTTG CCTGGAAGAG TTTGTACCGC ACTGGATCTT CGAGGTTTTG GCTCATGGTT GTTTTTATTC TGAAGGGCCT GGTTACTATC TAGCTAGCCG CCGGATGCTA CTTGCCTATC TCAAAGGTAC ATCCTGCTAT GCTACAGATT TTTGTTGTTG CTATCTGAGT GCAGTCAAGT TGATTGCTAA AACTTCATTC ATTAACTCTG ATTATCGAGA TATAACCCGT TCAATTGGTT CATTCTACGA AATACAGATG GTTTGATTGT TTAAACCCGA AAACCTTAGA AATTTAGTTA GGAATTTATT TGTAACATTG GTCG |
CDS |
| >Mp3g05470.1 ATGAAAGAGG AAGTAGATGA AGAGCACCAA AGCCGTTACC AGAAGAGAGA GAGCACAGCC TTTGCCGTCT CTCCCGCTTC AGCCTGGGGC TTGACAACTG GGGCTGTGCT ATCCCTCTTC TGCTGCCGGA TTTGTTGCAT GTTAGTCCTT CCTCCGAATC TCGTACGTGC GTTTGGGACT CCTACGCCTG TCAAAGATGA TTGGTATCCA GTAACCCAGC GGATGGGCCC AAAAGTAGGA GAGCTATTTG AACATCACAT GAGTTTATGG AGAGTCTTTT GA |
Protein |
| >Mp3g05470.1 MKEEVDEEHQ SRYQKRESTA FAVSPASAWG LTTGAVLSLF CCRICCMLVL PPNLVRAFGT PTPVKDDWYP VTQRMGPKVG ELFEHHMSLW RVF |