Mp3g06700



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
PANTHER PTHR46201 PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED
CDD cd15556 PHD_MMD1_like
ProSitePatterns PS01359 Zinc finger PHD-type signature.
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
KEGG K26271 PHD finger protein MS1/MMD1
KOG KOG1844 PHD Zn-finger proteins; [R]
KOG KOG1844 PHD Zn-finger proteins; C-term missing; [R]
MapolyID Mapoly0006s0138 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Antheridium-specific PHD subclade II gene peaking at late stage; loss-of-function mutants showed no effect on male gametogenesis, contrasting MpGLID.

0 core 1 peripheral

Ren, X., et al. (2024) · Plant Cell  research experimental comparator
Antheridium-specific PHD subclade II gene peaking at late stage; loss-of-function mutants showed no effect on male gametogenesis, contrasting MpGLID.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g06700.1 chr3:6983223..6987143 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g06700 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g06700 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.