Mp3g09650
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.40.40.10 | - |
| SUPERFAMILY | SSF49590 | PHL pollen allergen |
| ProSiteProfiles | PS50842 | Expansin, family-45 endoglucanase-like domain profile. |
| PRINTS | PR01226 | Expansin signature |
| ProSiteProfiles | PS50843 | Expansin, Cellulose-binding-like domain profile. |
| PANTHER | PTHR31867 | EXPANSIN-A15 |
| Pfam | PF01357 | Expansin C-terminal domain |
| SUPERFAMILY | SSF50685 | Barwin-like endoglucanases |
| Gene3D | G3DSA:2.60.40.760 | - |
| Pfam | PF03330 | Lytic transglycolase |
| CDD | cd22274 | DPBB_EXPA_N |
| SMART | SM00837 | dpbb_1 |
| PRINTS | PR01225 | Expansin/Lol pI family signature |
| KEGG | K20628 | expansin |
| MapolyID | Mapoly0085s0061 | - |
| GO | GO:0005576 | extracellular region |
| GO | GO:0009664 | plant-type cell wall organization |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpExpansin19 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g09650 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g09650.1 GCCTCCGGTT CGTTTCTAAG TTCTCTCTTC GTACTCGTCT GGCTCGATCT GTTACGTAAG TTCTTTGACA TATAGCGAGC GTTGACATGA AATTGAGCTT GGAAACCTTA TCAAGTTTAT GATGATTTAT GATGTGAGGC CCTCACTCGC TGACAAAACC TTTTGCTCTT GAATATTCCA GAAAATGGAC AGTATCAGAA TCATGATGGC CCGTGATCTG CTAAAGTTCA AGTTCCTGGT GCTGCTCATA TGTGCATCCG CATCCATCAA TGCTGCACCT GTATACACCA ACACCAAATG GACGGACTCA CATGCGACAT TCTACGGTGG AAATAATGCT CAAGGAACAA TGGGTGCGTT CTAGCTTCCT CACATTAACA CCATTAGCAT GAGTGCTGAT TTGCAAATAT TTGAACCCCT ATAACTCTGC ATGTCATCCT GATTATGCGC AACAAACTCA ATATGCTCGG AAATTCTTCT CGCCAAATAC TTGGGGACTG ATTTTGGAAA GTCATAGTAA GCTTTCATTC TTGATGGTTG AATTTGACGT TTTGTATTTC TTCTATCTTC AGGAGGCGCA TGCGGATATG GAAACATGTA TTCCAGAGGT TATGGTCTAG AGACCACGGC CTTGAGCTCA ACTCTCTTCA ACAAGGGTCT AACTTGTGGA GCCTGCTTTG AAATCAAGTG CAAGGTGGCC GACACCAGAT GGTGCTATGC AAATGCTGGA TCTATCAAGG TTACTGCGAC AAACCTCTGC CCTGCAAATC CCGCTAGACC CACCAACAAT GGCGGATGGT GCAACCCGCC CAGGACTCAC TTCGATCTGT CGTACCCGAT GTTCACTCGC CTGGCCAAAG CAGTGGGAGG CATCATCCCC GTCCAGTTTC GAAGGTGATC ATCTTCTCAA TGAGTTTGCA TTGCATCGAA CTGTAATCCT ACATCGCTAG TGCGATCCGA TCCGATTATG TTTCTATTTT CTTTCGACAG TGGCAACATA GGACTCATTA GTTGCAACCT GGCTGCATAA ATTTGAAATC TGCGCCAGAA ATAAATGGGT AGCCATTTCT TCACAAATGT GTAGCAATAT TCAAACGTCT GACATAGCGG TTGTTGGTGC AGAGTACCAT GTGTGAAGGT TGGCGGAATT CGTTTTGTTA TGAACGGCAA TCCGTGGTTC AACCTCGTGC TCGTTTACAA TGTGGCCGGA GCTGGAAATG TGGTGAACAT GCAGATGAAA GGTTCCAAAA CCAACTGGTT CACGATGAAG CAGAATTGGG GACAGAACTG GGAACTCAAG CAGAAGCTGA AGGGACAGTC CATATCGTTC CGGGTGACGC TTGGCAATGG AAAAGTGATG ATTGCCAACA ACGTGGCCCC AGCAAACTGG AACTTCCAAC AAACTTTTGA ATCCGATAAC AACTTTTAGG CTTCTTCGGA AACTGCGGCC AGCTGAATGT CTGTCATAGC TCACAGACCA GGCGCATCCA GCACAGAATC TCAGCTGACT AGAAACGGCC GCTGGAAGCT CGCCAATTTT AATGCAGGTG ATTGCCCAGC TCGTGCTGGG CAATCTTCGA TGGTGACTAA TGATAAACGG GGGAGGCGTG TAGATATGAA GTGCGCCCAC CGTTGGTCGA GCAAACTTGA CTGGATGGCT CGAATCCAAC AGGCGTCTCA AAACAGAAAA GAAAGTACTT CACCAGTAAG ATCATCAGGC GTGTATTCTC ATGTTTCAGA TCCTTGTACC ACAAGAATCA AGCACATTTT GTGCAATGTA AGATACTTCA GCTCGAAACA GAGAGCTGGA GGTAAACGTG GAGGAGGTGA GATCATCGAA ACCACCCGCC ACGACAATGT GAGGTATAAA TCATCACGAT CAAAAGAAGC AAACAGATTT ACCCTGTGGT CGTGACCCTG CAGCTGGAGT GCCACTGTGA TGCTCTTTCA CGCTCAATGT GTGGCGCATG TTCTCCTGAA GTTCTCCACC ACAATGCAAA CGATGTATAT GATGTATATT AGGCTGATAG CTCGAGGTGT AGGCAGATGA AGCCCACCCG CTTGACGTTG TAACTTTGGT GTTCGATGAA GCTACTGATT GTGAACAAAC TGTGAACTTG CAAGCTGAGA TGCAGGCAAT CTGATGCCCA TCCGCTGAAA TGAAGTTTAC AGTTAGATCT AGAGACAGAC AGTCATATAG TTGCTGAGTT TTGAGCAGAG TTGCCAACCG GCTCTATAAT TAGTACAGAA TAATGGACGT GGACGTTTTT GTTCATGCAA GAAATGTCTT CATTTCTTAT CCGTGATGCT TTCGCTGGAA AGAGTCACGT CTATCTTTCA AAGCTATGAT GAAGTACAGG CTTGAGGATC TAAATGCGAA CACTGGTGTA GCAAGCATCA TTAATATCGC |
mRNA UTR + CDS |
| >Mp3g09650.1 GCCTCCGGTT CGTTTCTAAG TTCTCTCTTC GTACTCGTCT GGCTCGATCT GTTACAAAAT GGACAGTATC AGAATCATGA TGGCCCGTGA TCTGCTAAAG TTCAAGTTCC TGGTGCTGCT CATATGTGCA TCCGCATCCA TCAATGCTGC ACCTGTATAC ACCAACACCA AATGGACGGA CTCACATGCG ACATTCTACG GTGGAAATAA TGCTCAAGGA ACAATGGGAG GCGCATGCGG ATATGGAAAC ATGTATTCCA GAGGTTATGG TCTAGAGACC ACGGCCTTGA GCTCAACTCT CTTCAACAAG GGTCTAACTT GTGGAGCCTG CTTTGAAATC AAGTGCAAGG TGGCCGACAC CAGATGGTGC TATGCAAATG CTGGATCTAT CAAGGTTACT GCGACAAACC TCTGCCCTGC AAATCCCGCT AGACCCACCA ACAATGGCGG ATGGTGCAAC CCGCCCAGGA CTCACTTCGA TCTGTCGTAC CCGATGTTCA CTCGCCTGGC CAAAGCAGTG GGAGGCATCA TCCCCGTCCA GTTTCGAAGA GTACCATGTG TGAAGGTTGG CGGAATTCGT TTTGTTATGA ACGGCAATCC GTGGTTCAAC CTCGTGCTCG TTTACAATGT GGCCGGAGCT GGAAATGTGG TGAACATGCA GATGAAAGGT TCCAAAACCA ACTGGTTCAC GATGAAGCAG AATTGGGGAC AGAACTGGGA ACTCAAGCAG AAGCTGAAGG GACAGTCCAT ATCGTTCCGG GTGACGCTTG GCAATGGAAA AGTGATGATT GCCAACAACG TGGCCCCAGC AAACTGGAAC TTCCAACAAA CTTTTGAATC CGATAACAAC TTTTAGGCTT CTTCGGAAAC TGCGGCCAGC TGAATGTCTG TCATAGCTCA CAGACCAGGC GCATCCAGCA CAGAATCTCA GCTGACTAGA AACGGCCGCT GGAAGCTCGC CAATTTTAAT GCAGGTGATT GCCCAGCTCG TGCTGGGCAA TCTTCGATGG TGACTAATGA TAAACGGGGG AGGCGTGTAG ATATGAAGTG CGCCCACCGT TGGTCGAGCA AACTTGACTG GATGGCTCGA ATCCAACAGG CGTCTCAAAA CAGAAAAGAA AGTACTTCAC CAGTAAGATC ATCAGGCGTG TATTCTCATG TTTCAGATCC TTGTACCACA AGAATCAAGC ACATTTTGTG CAATGTAAGA TACTTCAGCT CGAAACAGAG AGCTGGAGGT AAACGTGGAG GAGGTGAGAT CATCGAAACC ACCCGCCACG ACAATGTGAG GTATAAATCA TCACGATCAA AAGAAGCAAA CAGATTTACC CTGTGGTCGT GACCCTGCAG CTGGAGTGCC ACTGTGATGC TCTTTCACGC TCAATGTGTG GCGCATGTTC TCCTGAAGTT CTCCACCACA ATGCAAACGA TGTATATGAT GTATATTAGG CTGATAGCTC GAGGTGTAGG CAGATGAAGC CCACCCGCTT GACGTTGTAA CTTTGGTGTT CGATGAAGCT ACTGATTGTG AACAAACTGT GAACTTGCAA GCTGAGATGC AGGCAATCTG ATGCCCATCC GCTGAAATGA AGTTTACAGT TAGATCTAGA GACAGACAGT CATATAGTTG CTGAGTTTTG AGCAGAGTTG CCAACCGGCT CTATAATTAG TACAGAATAA TGGACGTGGA CGTTTTTGTT CATGCAAGAA ATGTCTTCAT TTCTTATCCG TGATGCTTTC GCTGGAAAGA GTCACGTCTA TCTTTCAAAG CTATGATGAA GTACAGGCTT GAGGATCTAA ATGCGAACAC TGGTGTAGCA AGCATCATTA ATATCGC |
CDS |
| >Mp3g09650.1 ATGGACAGTA TCAGAATCAT GATGGCCCGT GATCTGCTAA AGTTCAAGTT CCTGGTGCTG CTCATATGTG CATCCGCATC CATCAATGCT GCACCTGTAT ACACCAACAC CAAATGGACG GACTCACATG CGACATTCTA CGGTGGAAAT AATGCTCAAG GAACAATGGG AGGCGCATGC GGATATGGAA ACATGTATTC CAGAGGTTAT GGTCTAGAGA CCACGGCCTT GAGCTCAACT CTCTTCAACA AGGGTCTAAC TTGTGGAGCC TGCTTTGAAA TCAAGTGCAA GGTGGCCGAC ACCAGATGGT GCTATGCAAA TGCTGGATCT ATCAAGGTTA CTGCGACAAA CCTCTGCCCT GCAAATCCCG CTAGACCCAC CAACAATGGC GGATGGTGCA ACCCGCCCAG GACTCACTTC GATCTGTCGT ACCCGATGTT CACTCGCCTG GCCAAAGCAG TGGGAGGCAT CATCCCCGTC CAGTTTCGAA GAGTACCATG TGTGAAGGTT GGCGGAATTC GTTTTGTTAT GAACGGCAAT CCGTGGTTCA ACCTCGTGCT CGTTTACAAT GTGGCCGGAG CTGGAAATGT GGTGAACATG CAGATGAAAG GTTCCAAAAC CAACTGGTTC ACGATGAAGC AGAATTGGGG ACAGAACTGG GAACTCAAGC AGAAGCTGAA GGGACAGTCC ATATCGTTCC GGGTGACGCT TGGCAATGGA AAAGTGATGA TTGCCAACAA CGTGGCCCCA GCAAACTGGA ACTTCCAACA AACTTTTGAA TCCGATAACA ACTTTTAG |
Protein |
| >Mp3g09650.1 MDSIRIMMAR DLLKFKFLVL LICASASINA APVYTNTKWT DSHATFYGGN NAQGTMGGAC GYGNMYSRGY GLETTALSST LFNKGLTCGA CFEIKCKVAD TRWCYANAGS IKVTATNLCP ANPARPTNNG GWCNPPRTHF DLSYPMFTRL AKAVGGIIPV QFRRVPCVKV GGIRFVMNGN PWFNLVLVYN VAGAGNVVNM QMKGSKTNWF TMKQNWGQNW ELKQKLKGQS ISFRVTLGNG KVMIANNVAP ANWNFQQTFE SDNNF |