Mp3g12060



Description

Annotation

Database ID Description
Coils Coil Coil
Gene3D G3DSA:1.10.10.10 -
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM01372 E2F_TDP_2
Pfam PF08781 Transcription factor DP
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
SMART SM01138 DP_2
CDD cd14458 DP_DD
PANTHER PTHR12548 TRANSCRIPTION FACTOR DP
FunFam G3DSA:1.20.140.80:FF:000002 Transcription factor-like protein DPB
Pfam PF02319 E2F/DP family winged-helix DNA-binding domain
Gene3D G3DSA:1.20.140.80 Transcription factor DP
FunFam G3DSA:1.10.10.10:FF:000187 Transcription factor-like protein DPB
SUPERFAMILY SSF144074 E2F-DP heterodimerization region
KEGG K04683 transcription factor Dp-1
KOG KOG2829 E2F-like protein; C-term missing; [K]
MapolyID Mapoly0050s0010 -
GO GO:0005667 transcription regulator complex
GO GO:0005634 nucleus
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO GO:0051726 regulation of cell cycle
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpDP1 transcription factor, E2F/DP/DEL Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, E2F/DP/DEL (from nomenclature)

0 core 1 peripheral

Romani, F., et al. (2026) · The Plant Cell  research experimental comparator
DP dimerization partner of E2F; phase expression in the core set.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g12060.1 chr3:12621475..12629382 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g12060.2 chr3:12621991..12629696 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g12060.3 chr3:12621732..12629382 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g12060.4 chr3:12621820..12629382 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g12060 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g12060 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.