Mp3g12150



Description

Annotation

Database ID Description
CDD cd01053 AOX
Gene3D G3DSA:1.20.1260.140 Alternative oxidase
PANTHER PTHR31803 ALTERNATIVE OXIDASE
FunFam G3DSA:1.20.1260.140:FF:000003 Ubiquinol oxidase
Pfam PF01786 Alternative oxidase
KEGG K17893 ubiquinol oxidase [EC:1.10.3.11]
MapolyID Mapoly0050s0020 -
GO GO:0005739 mitochondrion
GO GO:0009579 thylakoid
GO GO:0010230 alternative respiration
GO GO:0009916 alternative oxidase activity
GO GO:0016117 carotenoid biosynthetic process

Nomenclature

Gene symbol Product Transcript ID Status
MpPTOXa Provisional

Associated Literature (AI-based literature mining, Beta-version)

Plastid terminal oxidase isoform (Mapoly0050s0020); plant-type PTOX, biochemically/phylogenetically characterized; chlororespiratory electron sink.

1 core 0 peripheral

Messant, M., et al. (2021) · Bioenergetics  research experimental subject
Plastid terminal oxidase isoform (Mapoly0050s0020); plant-type PTOX, biochemically/phylogenetically characterized; chlororespiratory electron sink.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g12150.1 chr3:12728056..12732312 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g12150 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g12150 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.