Mp3g12300
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.40.40.10 | - |
| Pfam | PF03330 | Lytic transglycolase |
| ProSiteProfiles | PS50843 | Expansin, Cellulose-binding-like domain profile. |
| SMART | SM00837 | dpbb_1 |
| Pfam | PF01357 | Expansin C-terminal domain |
| ProSiteProfiles | PS50842 | Expansin, family-45 endoglucanase-like domain profile. |
| Gene3D | G3DSA:2.60.40.760 | - |
| SUPERFAMILY | SSF50685 | Barwin-like endoglucanases |
| PRINTS | PR01225 | Expansin/Lol pI family signature |
| PRINTS | PR01226 | Expansin signature |
| PANTHER | PTHR31867 | EXPANSIN-A15 |
| SUPERFAMILY | SSF49590 | PHL pollen allergen |
| KEGG | K20628 | expansin |
| MapolyID | Mapoly0050s0035 | - |
| GO | GO:0005576 | extracellular region |
| GO | GO:0009664 | plant-type cell wall organization |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpExpansin28 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g12300 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g12300.1 GACTCATAAC CGTACCCCCC CTCCTCGCCT TGATAATCGA CATCGACCCC AAGCTTCAAG ACTCGCATGT TTATCGTCGT GCTTAATAGA AGCGAACATT GTTTTCGGAC TCGTATCGAA TCTCTCTCTG GGAGTTCACA AAGGAGGCCA GAGGCAAACT CTCATGACTG ACTCTGTTCG TTCCCTCGCA CCTCGTTCCT CCAGTCGAGT GGAGCTGGTC CTAACGCGTT GAGCTCGCTC CAATGTTCTG CAGGAAGATG ACTGAAATGA GGAGGATCAG TAGACTGGCA TGGAGCTGCA GCTTGGCAGT GGCAGCCACG GCATTGCTCG TGCTTCTGGC GGCAGATGTG GCGGAGGCGA ACGAATCATT CGCCGTGGGC CGCACATCAT TCGGAGACGC CACTGCGACG TTTTATGGCG GAAGCGACGC TGCAGGAACG GCTGGGGGGT TCTGTGGGTA CGAGAACCCC TTCACTCGAG GGTATGGAGT CACAACGGTG GCGCTCAGTG ACAGCCTGCT CAGCAATGGG CTCAATTGTG GCGCTTGTTA TGAGGTCAAG TGCAAGTGGG AGGCCTCGGA CTACACCAAG AAGTACTGCT ACCAGGGCAT GACCACGATT GTCTCCGCCA CCAACCTCAG CCCCCCCGGG CTCAATGGCG AGCACCATTT CGACTTGACG TACCCCATGT TCGTCAAGAT TTCCAACCCG GAATCTGGCC GCATCCCCAT CCAGTACCGA AGGTAAGACC GTGCCCCACT GCCTGCCCAT GCAGTCTCCC GTCAGACCTC AGCTCAGCTG TCGATAGAAC ATCTCGTCTT GTAGCACATT TGTGAGCATT TCGTCACGAG GTTTTAGGTC TTACGAAGGT CGTTGATTCA GTGCATGCTG TCTTCGATCG TGACTTTGGT TGCATTACGG TGTGGGCTGG TGAGCATTCG CGATGCCATG GCCGGGAAGG AGCTGTGCTT ATATTCTGTG GACTCGCTTG TGATGTTATC AGGGTGCCCT GTCAGAAGCA AGGAGGAATA AGGTTCTCCA TGGTGGGAAA TCCCTTCTGG AATCTGGTCC TCGTCTACAA TGTGGGCGGC TGGGGGAACG TCCACTCTCT GTACGTCAGA GGCTCTCGAA CCGATTGGTA TTACATGAAC AGAAACTGGG GTCAAAATTG GCAGTGTTCT GTCAACTTGA CGGGCCAGAA GTTGTCGTTC CGTGTAGTTC TTGGGAATGG GCAAACGAGT GTGTTCAACA ACGTAGCTGA CTCGAATTGG AAGCACGGCC AGACCTACGA GGCGAGCAGC AATTTCTGGT GAAGTGGGTC GTGGGGATGT CTGTATGAAG AATGCGCCGA TCAATGGAAC GGAGCGTTTT GAAATAAGTT CAGTTGCAGC GAAGCAGAGG TGGCGTGTTA ATATCACCGT ATGGTTGCGC CCACTGAATC GCTGGTTCGT ACTCGTAGCT TCTGCTTCCG CGACAGATGT GGTGTGTAAA CAACCATGGA CAACTGCGCC CTCTGCCAGG AAGACGAGAT GGCGTCGAGT GGAAAGAGTT CCAGACAGCG CCTTCACACT CGGTGACTGA CAGAGTGAAT TTTTCCTTGT CAATGTGAAC TTGGGTCCCG ATGCTGCTGT ACGTGTCTGA CGATCTCGTA GGGTTCGCAC TGCATAATAT CAGCTGCAGG ATTCTGCGAG ATGGATGCAT TGATTGTACT ATACTGTTCT CTGTACTCGG CCGACTGAGG AACTTCGCGG ACGTGGACAT GGTCCATAGA GGTCTCCCGC TGCGGAACAG CTGCCGATTG GCTTTTAAAT CATATTTTAA TAAAGAGTCA AATCTTGACC GA |
mRNA UTR + CDS |
| >Mp3g12300.1 GACTCATAAC CGTACCCCCC CTCCTCGCCT TGATAATCGA CATCGACCCC AAGCTTCAAG ACTCGCATGT TTATCGTCGT GCTTAATAGA AGCGAACATT GTTTTCGGAC TCGTATCGAA TCTCTCTCTG GGAGTTCACA AAGGAGGCCA GAGGCAAACT CTCATGACTG ACTCTGTTCG TTCCCTCGCA CCTCGTTCCT CCAGTCGAGT GGAGCTGGTC CTAACGCGTT GAGCTCGCTC CAATGTTCTG CAGGAAGATG ACTGAAATGA GGAGGATCAG TAGACTGGCA TGGAGCTGCA GCTTGGCAGT GGCAGCCACG GCATTGCTCG TGCTTCTGGC GGCAGATGTG GCGGAGGCGA ACGAATCATT CGCCGTGGGC CGCACATCAT TCGGAGACGC CACTGCGACG TTTTATGGCG GAAGCGACGC TGCAGGAACG GCTGGGGGGT TCTGTGGGTA CGAGAACCCC TTCACTCGAG GGTATGGAGT CACAACGGTG GCGCTCAGTG ACAGCCTGCT CAGCAATGGG CTCAATTGTG GCGCTTGTTA TGAGGTCAAG TGCAAGTGGG AGGCCTCGGA CTACACCAAG AAGTACTGCT ACCAGGGCAT GACCACGATT GTCTCCGCCA CCAACCTCAG CCCCCCCGGG CTCAATGGCG AGCACCATTT CGACTTGACG TACCCCATGT TCGTCAAGAT TTCCAACCCG GAATCTGGCC GCATCCCCAT CCAGTACCGA AGGGTGCCCT GTCAGAAGCA AGGAGGAATA AGGTTCTCCA TGGTGGGAAA TCCCTTCTGG AATCTGGTCC TCGTCTACAA TGTGGGCGGC TGGGGGAACG TCCACTCTCT GTACGTCAGA GGCTCTCGAA CCGATTGGTA TTACATGAAC AGAAACTGGG GTCAAAATTG GCAGTGTTCT GTCAACTTGA CGGGCCAGAA GTTGTCGTTC CGTGTAGTTC TTGGGAATGG GCAAACGAGT GTGTTCAACA ACGTAGCTGA CTCGAATTGG AAGCACGGCC AGACCTACGA GGCGAGCAGC AATTTCTGGT GAAGTGGGTC GTGGGGATGT CTGTATGAAG AATGCGCCGA TCAATGGAAC GGAGCGTTTT GAAATAAGTT CAGTTGCAGC GAAGCAGAGG TGGCGTGTTA ATATCACCGT ATGGTTGCGC CCACTGAATC GCTGGTTCGT ACTCGTAGCT TCTGCTTCCG CGACAGATGT GGTGTGTAAA CAACCATGGA CAACTGCGCC CTCTGCCAGG AAGACGAGAT GGCGTCGAGT GGAAAGAGTT CCAGACAGCG CCTTCACACT CGGTGACTGA CAGAGTGAAT TTTTCCTTGT CAATGTGAAC TTGGGTCCCG ATGCTGCTGT ACGTGTCTGA CGATCTCGTA GGGTTCGCAC TGCATAATAT CAGCTGCAGG ATTCTGCGAG ATGGATGCAT TGATTGTACT ATACTGTTCT CTGTACTCGG CCGACTGAGG AACTTCGCGG ACGTGGACAT GGTCCATAGA GGTCTCCCGC TGCGGAACAG CTGCCGATTG GCTTTTAAAT CATATTTTAA TAAAGAGTCA AATCTTGACC GA |
CDS |
| >Mp3g12300.1 ATGTTCTGCA GGAAGATGAC TGAAATGAGG AGGATCAGTA GACTGGCATG GAGCTGCAGC TTGGCAGTGG CAGCCACGGC ATTGCTCGTG CTTCTGGCGG CAGATGTGGC GGAGGCGAAC GAATCATTCG CCGTGGGCCG CACATCATTC GGAGACGCCA CTGCGACGTT TTATGGCGGA AGCGACGCTG CAGGAACGGC TGGGGGGTTC TGTGGGTACG AGAACCCCTT CACTCGAGGG TATGGAGTCA CAACGGTGGC GCTCAGTGAC AGCCTGCTCA GCAATGGGCT CAATTGTGGC GCTTGTTATG AGGTCAAGTG CAAGTGGGAG GCCTCGGACT ACACCAAGAA GTACTGCTAC CAGGGCATGA CCACGATTGT CTCCGCCACC AACCTCAGCC CCCCCGGGCT CAATGGCGAG CACCATTTCG ACTTGACGTA CCCCATGTTC GTCAAGATTT CCAACCCGGA ATCTGGCCGC ATCCCCATCC AGTACCGAAG GGTGCCCTGT CAGAAGCAAG GAGGAATAAG GTTCTCCATG GTGGGAAATC CCTTCTGGAA TCTGGTCCTC GTCTACAATG TGGGCGGCTG GGGGAACGTC CACTCTCTGT ACGTCAGAGG CTCTCGAACC GATTGGTATT ACATGAACAG AAACTGGGGT CAAAATTGGC AGTGTTCTGT CAACTTGACG GGCCAGAAGT TGTCGTTCCG TGTAGTTCTT GGGAATGGGC AAACGAGTGT GTTCAACAAC GTAGCTGACT CGAATTGGAA GCACGGCCAG ACCTACGAGG CGAGCAGCAA TTTCTGGTGA |
Protein |
| >Mp3g12300.1 MFCRKMTEMR RISRLAWSCS LAVAATALLV LLAADVAEAN ESFAVGRTSF GDATATFYGG SDAAGTAGGF CGYENPFTRG YGVTTVALSD SLLSNGLNCG ACYEVKCKWE ASDYTKKYCY QGMTTIVSAT NLSPPGLNGE HHFDLTYPMF VKISNPESGR IPIQYRRVPC QKQGGIRFSM VGNPFWNLVL VYNVGGWGNV HSLYVRGSRT DWYYMNRNWG QNWQCSVNLT GQKLSFRVVL GNGQTSVFNN VADSNWKHGQ TYEASSNFW |
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g12300.2 ATCAGAGCCA GTGATTCTGC AGGAGGCCCT CCCTCCCCCT GGACACCCAC ATTGTGCGCT GGGCGACGAG TCGCAGCTGC TCCTGCCTCT CAGGTACTCC TCTCGACTCA TAACCGTACC CCCCCTCCTC GCCTTGATAA TCGACATCGA CCCCAAGCTT CAAGACTCGC ATGTTTATCG TCGTGCTTAA TAGAAGCGAA CATTGTTTTC GGACTCGTAT CGAATCTCTC TCTGGGAGTT CACAAAGGAG GCCAGAGGCA AACTCTCATG ACTGACTCTG TTCGTTCCCT CGCACCTCGT TCCTCCAGTC GAGTGGAGCT GGTCCTAACG CGTTGAGCTC GCTCCAATGT TCTGCAGGAA GATGACTGAA ATGAGGAGGA TCAGTAGACT GGCATGGAGC TGCAGCTTGG CAGTGGCAGC CACGGCATTG CTCGTGCTTC TGGCGGCAGA TGTGGCGGAG GCGAACGAAT CATTCGCCGT GGGCCGCACA TCATTCGGAG ACGCCACTGC GACGTTTTAT GGCGGAAGCG ACGCTGCAGG AACGGCTGGG GGGTTCTGTG GGTACGAGAA CCCCTTCACT CGAGGGTATG GAGTCACAAC GGTGGCGCTC AGTGACAGCC TGCTCAGCAA TGGGCTCAAT TGTGGCGCTT GTTATGAGGT CAAGTGCAAG TGGGAGGCCT CGGACTACAC CAAGAAGTAC TGCTACCAGG GCATGACCAC GATTGTCTCC GCCACCAACC TCAGCCCCCC CGGGCTCAAT GGCGAGCACC ATTTCGACTT GACGTACCCC ATGTTCGTCA AGATTTCCAA CCCGGAATCT GGCCGCATCC CCATCCAGTA CCGAAGGTAA GACCGTGCCC CACTGCCTGC CCATGCAGTC TCCCGTCAGA CCTCAGCTCA GCTGTCGATA GAACATCTCG TCTTGTAGCA CATTTGTGAG CATTTCGTCA CGAGGTTTTA GGTCTTACGA AGGTCGTTGA TTCAGTGCAT GCTGTCTTCG ATCGTGACTT TGGTTGCATT ACGGTGTGGG CTGGTGAGCA TTCGCGATGC CATGGCCGGG AAGGAGCTGT GCTTATATTC TGTGGACTCG CTTGTGATGT TATCAGGGTG CCCTGTCAGA AGCAAGGAGG AATAAGGTTC TCCATGGTGG GAAATCCCTT CTGGAATCTG GTCCTCGTCT ACAATGTGGG CGGCTGGGGG AACGTCCACT CTCTGTACGT CAGAGGCTCT CGAACCGATT GGTATTACAT GAACAGAAAC TGGGGTCAAA ATTGGCAGTG TTCTGTCAAC TTGACGGGCC AGAAGTTGTC GTTCCGTGTA GTTCTTGGGA ATGGGCAAAC GAGTGTGTTC AACAACGTAG CTGACTCGAA TTGGAAGCAC GGCCAGACCT ACGAGGCGAG CAGCAATTTC TGGTGAAGTG GGTCGTGGGG ATGTCTGTAT GAAGAATGCG CCGATCAATG GAACGGAGCG TTTTGAAATA AGTTCAGTTG CAGCGAAGCA GAGGTGGCGT GTTAATATCA CCGTATGGTT GCGCCCACTG AATCGCTGGT TCGTACTCGT AGCTTCTGCT TCCGCGACAG ATGTGGTGTG TAAACAACCA TGGACAACTG CGCCCTCTGC CAGGAAGACG AGATGGCGTC GAGTGGAAAG AGTTCCAGAC AGCGCCTTCA CACTCGGTGA CTGACAGAGT GAATTTTTCC TTGTCAATGT GAACTTGGGT CCCGATGCTG CTGTACGTGT CTGACGATCT CGTAGGGTTC GCACTGCATA ATATCAGCTG CAGGATTCTG CGAGATGGAT GCATTGATTG TACTATACTG TTCTCTGTAC TCGGCCGACT GAGGAACTTC GCGGACGTGG ACATGGTCCA TAGAGGTCTC CCGCTGCGGA ACAGCTGCCG ATTGGCTTTT AAATCATATT TTAATAAAGA GTCAAATCTT GACCGACCTT GTTGG |
mRNA UTR + CDS |
| >Mp3g12300.2 ATCAGAGCCA GTGATTCTGC AGGAGGCCCT CCCTCCCCCT GGACACCCAC ATTGTGCGCT GGGCGACGAG TCGCAGCTGC TCCTGCCTCT CAGGAAGATG ACTGAAATGA GGAGGATCAG TAGACTGGCA TGGAGCTGCA GCTTGGCAGT GGCAGCCACG GCATTGCTCG TGCTTCTGGC GGCAGATGTG GCGGAGGCGA ACGAATCATT CGCCGTGGGC CGCACATCAT TCGGAGACGC CACTGCGACG TTTTATGGCG GAAGCGACGC TGCAGGAACG GCTGGGGGGT TCTGTGGGTA CGAGAACCCC TTCACTCGAG GGTATGGAGT CACAACGGTG GCGCTCAGTG ACAGCCTGCT CAGCAATGGG CTCAATTGTG GCGCTTGTTA TGAGGTCAAG TGCAAGTGGG AGGCCTCGGA CTACACCAAG AAGTACTGCT ACCAGGGCAT GACCACGATT GTCTCCGCCA CCAACCTCAG CCCCCCCGGG CTCAATGGCG AGCACCATTT CGACTTGACG TACCCCATGT TCGTCAAGAT TTCCAACCCG GAATCTGGCC GCATCCCCAT CCAGTACCGA AGGGTGCCCT GTCAGAAGCA AGGAGGAATA AGGTTCTCCA TGGTGGGAAA TCCCTTCTGG AATCTGGTCC TCGTCTACAA TGTGGGCGGC TGGGGGAACG TCCACTCTCT GTACGTCAGA GGCTCTCGAA CCGATTGGTA TTACATGAAC AGAAACTGGG GTCAAAATTG GCAGTGTTCT GTCAACTTGA CGGGCCAGAA GTTGTCGTTC CGTGTAGTTC TTGGGAATGG GCAAACGAGT GTGTTCAACA ACGTAGCTGA CTCGAATTGG AAGCACGGCC AGACCTACGA GGCGAGCAGC AATTTCTGGT GAAGTGGGTC GTGGGGATGT CTGTATGAAG AATGCGCCGA TCAATGGAAC GGAGCGTTTT GAAATAAGTT CAGTTGCAGC GAAGCAGAGG TGGCGTGTTA ATATCACCGT ATGGTTGCGC CCACTGAATC GCTGGTTCGT ACTCGTAGCT TCTGCTTCCG CGACAGATGT GGTGTGTAAA CAACCATGGA CAACTGCGCC CTCTGCCAGG AAGACGAGAT GGCGTCGAGT GGAAAGAGTT CCAGACAGCG CCTTCACACT CGGTGACTGA CAGAGTGAAT TTTTCCTTGT CAATGTGAAC TTGGGTCCCG ATGCTGCTGT ACGTGTCTGA CGATCTCGTA GGGTTCGCAC TGCATAATAT CAGCTGCAGG ATTCTGCGAG ATGGATGCAT TGATTGTACT ATACTGTTCT CTGTACTCGG CCGACTGAGG AACTTCGCGG ACGTGGACAT GGTCCATAGA GGTCTCCCGC TGCGGAACAG CTGCCGATTG GCTTTTAAAT CATATTTTAA TAAAGAGTCA AATCTTGACC GACCTTGTTG G |
CDS |
| >Mp3g12300.2 ATGACTGAAA TGAGGAGGAT CAGTAGACTG GCATGGAGCT GCAGCTTGGC AGTGGCAGCC ACGGCATTGC TCGTGCTTCT GGCGGCAGAT GTGGCGGAGG CGAACGAATC ATTCGCCGTG GGCCGCACAT CATTCGGAGA CGCCACTGCG ACGTTTTATG GCGGAAGCGA CGCTGCAGGA ACGGCTGGGG GGTTCTGTGG GTACGAGAAC CCCTTCACTC GAGGGTATGG AGTCACAACG GTGGCGCTCA GTGACAGCCT GCTCAGCAAT GGGCTCAATT GTGGCGCTTG TTATGAGGTC AAGTGCAAGT GGGAGGCCTC GGACTACACC AAGAAGTACT GCTACCAGGG CATGACCACG ATTGTCTCCG CCACCAACCT CAGCCCCCCC GGGCTCAATG GCGAGCACCA TTTCGACTTG ACGTACCCCA TGTTCGTCAA GATTTCCAAC CCGGAATCTG GCCGCATCCC CATCCAGTAC CGAAGGGTGC CCTGTCAGAA GCAAGGAGGA ATAAGGTTCT CCATGGTGGG AAATCCCTTC TGGAATCTGG TCCTCGTCTA CAATGTGGGC GGCTGGGGGA ACGTCCACTC TCTGTACGTC AGAGGCTCTC GAACCGATTG GTATTACATG AACAGAAACT GGGGTCAAAA TTGGCAGTGT TCTGTCAACT TGACGGGCCA GAAGTTGTCG TTCCGTGTAG TTCTTGGGAA TGGGCAAACG AGTGTGTTCA ACAACGTAGC TGACTCGAAT TGGAAGCACG GCCAGACCTA CGAGGCGAGC AGCAATTTCT GGTGA |
Protein |
| >Mp3g12300.2 MTEMRRISRL AWSCSLAVAA TALLVLLAAD VAEANESFAV GRTSFGDATA TFYGGSDAAG TAGGFCGYEN PFTRGYGVTT VALSDSLLSN GLNCGACYEV KCKWEASDYT KKYCYQGMTT IVSATNLSPP GLNGEHHFDL TYPMFVKISN PESGRIPIQY RRVPCQKQGG IRFSMVGNPF WNLVLVYNVG GWGNVHSLYV RGSRTDWYYM NRNWGQNWQC SVNLTGQKLS FRVVLGNGQT SVFNNVADSN WKHGQTYEAS SNFW |