Mp3g13920
Description
Annotation
| Database | ID | Description |
|---|---|---|
| CDD | cd04150 | Arf1_5_like |
| SMART | SM00178 | sar_sub_1 |
| PANTHER | PTHR11711 | ADP RIBOSYLATION FACTOR-RELATED |
| SMART | SM00177 | arf_sub_2 |
| NCBIfam | TIGR00231 | small GTP-binding protein domain |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases |
| PRINTS | PR00328 | GTP-binding SAR1 protein signature |
| ProSiteProfiles | PS51417 | small GTPase Arf family profile. |
| Gene3D | G3DSA:3.40.50.300 | - |
| FunFam | G3DSA:3.40.50.300:FF:003500 | ADP-ribosylation factor 1 |
| Pfam | PF00025 | ADP-ribosylation factor family |
| KEGG | K07937 | ADP-ribosylation factor 1/2 |
| KEGG | K07941 | ADP-ribosylation factor 6 |
| KOG | KOG0070 | GTP-binding ADP-ribosylation factor Arf1; [U] |
| MapolyID | Mapoly0004s0279 | - |
| GO | GO:0003924 | GTPase activity |
| GO | GO:0016192 | vesicle-mediated transport |
| GO | GO:0005525 | GTP binding |
| GO | GO:0006886 | intracellular protein transport |
| GO | GO:0005737 | cytoplasm |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpARFA2 | SAR/ARF GTPase | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g13920 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g13920.1 TGACAACTCA AACTTAAGTA TCCGTTAGCA GCGCGTGGAT TGGAATAATA AGCGGGGCTG TCGTATTAGC CAGGCAGGCA GGCAGGCGAG GGAAGAGGAG GGGGGAGTTC CAGAAACCGA TGGGCCGGAG TAAATAAAGA AATGGGTAAA AGTCCGGCGC TGTAACTCGC GGGTCAAAAG GTGTGTGCGG TGTGCCCTTT ACTCGCGTCC TCCAGTCCTC CTCTTAGACC TTCTCGTCCG CCCGTGTCTT CCCTAAGAAC CGACTCCCGC AGCGACCCCC AAAACACAAG AGAGTGAGTG AGTGAGAGAA GAGGCGAGCA GGAGCGGAGC GCAGCGGAGT GGAGCTTGTG CAGCCCGTTG TCGTGCTCGT CCCGTCGCGT CGAGTCGAGT CGATCGCTGC TGCTGCTGCT GCTCGGGCGG TGGGTGCTGT GGTCGATTAG CTTAGCTTGC CGCTGATCTG CTGCTTCTTT CTCTTGCTTC TTCTTCGTCT TCCTCGGTGC GCGCGCGCGG TGGTGGTGGA TCTGGGACTG GGCTCGGGCG ATCGATCAGT GAGGGTTGAG GTCGAGGAAT TTGTGCGGTC GGTCGGTGGG TCGGCGGGAG CGAGGGAGTC GATCCGAGAG AAGGAAGGGA AGAGGCGGGT GGGGGGGGGG GAGAACGAAG GAGGTGTTGG ACGAGGGGAG CCGAGATGGG GCTTACGTTT ACCAAGCTGT TCTCGAGTCT GTTCTCGAAG AAGGAGATGC GGATCTTGAT GGTAGGTCTC GATGCGGCCG GAAAGACGAC TATCTTGTAT AAGTTGAAGC TCGGAGAGAT CGTGACCACC ATTCCTACCA TCGGGTTCAA TGTAGAGACC GTCGAGTACA AGAACATTAG CTTCACCGTA TGGGATGTCG GAGGTCAGGA CAAGATTCGT CCTCTGTGGA GGCACTACTT CCAGAACACA CAGGGTTTGA TCTTCGTGGT TGACAGTAAT GACAGAGATC GTGTCGTCGA GGCCCGCGAC GAGCTGCACC GGATGTTGAA CGAGGACGAG CTCCGCGGAG CCCTCTTGCT GGTGTTCGCT AACAAGCAGG ATCTGCCCAA CGCCATGAAC GCAGCTGAGA TCACCGACAA GCTCGGCCTG CACTCTCTGC GCCAGCGCCA CTGGTACATC CAGAGCACAT GCGCCACTTC AGGAGAGGGT CTGTACGAGG GGCTCGACTG GCTGTCGAGC AACATTGCCA GCAAGGCTTG ATTTACATAA CACAGCCTCA GATGTGTTAG ACTAGAGATG GGAAGAAAGC CTTATGGTAG TTCAACGCAG ACGTGGTCAC TCAAACTCGC TGGCGCCAGC TCTAGTGAGA TTTCTCTGTG ATAGTCAATC GATCTCACTC ACGGCAGTTG TGAGGTATCT GTGACGGTCA TTCGATCTCA CCCAAGGCAC TAGTGAGATA CCTGTGATGA CAGGAGTTGT TTATATTATG ATATACAGTC GCAGATTCTT ACCTTCACGT TGTTGATTAG TGACATTTTT AGGTCAACGG GATCGGTCTT GCGCGAAATT CTTTGTTGTA TTTCTTACTT CCACTCAACA AACCTCGAAG TCATTGCTTT CATTTGTCTA CTCTTCCTAT GACGCTCATT GATGTAGAAG CAGATACAGC GATTTTCTGG AAGGCGCTGT TCAAGATAGT TTGTTGAACA GTCTCTCTCC CACTGTGCGC GGTCGTACGT ACACGCCGCG TAGATTTGGA AGTTTCTATA AAAGCTGGTT GTTGTGAGCG AAAGCCT |
mRNA UTR + CDS |
| >Mp3g13920.1 TGACAACTCA AACTTAAGTA TCCGTTAGCA GCGCGTGGAT TGGAATAATA AGCGGGGCTG TCGTATTAGC CAGGCAGGCA GGCAGGCGAG GGAAGAGGAG GGGGGAGTTC CAGAAACCGA TGGGCCGGAG TAAATAAAGA AATGGGTAAA AGTCCGGCGC TGTAACTCGC GGGTCAAAAG GTGTGTGCGG TGTGCCCTTT ACTCGCGTCC TCCAGTCCTC CTCTTAGACC TTCTCGTCCG CCCGTGTCTT CCCTAAGAAC CGACTCCCGC AGCGACCCCC AAAACACAAG AGAGTGAGTG AGTGAGAGAA GAGGCGAGCA GGAGCGGAGC GCAGCGGAGT GGAGCTTGTG CAGCCCGTTG TCGTGCTCGT CCCGTCGCGT CGAGTCGAGT CGATCGCTGC TGCTGCTGCT GCTCGGGCGG TGGGTGCTGT GGTCGATTAG CTTAGCTTGC CGCTGATCTG CTGCTTCTTT CTCTTGCTTC TTCTTCGTCT TCCTCGGTGC GCGCGCGCGG TGGTGGTGGA TCTGGGACTG GGCTCGGGCG ATCGATCAGT GAGGGTTGAG GTCGAGGAAT TTGTGCGGTC GGTCGGTGGG TCGGCGGGAG CGAGGGAGTC GATCCGAGAG AAGGAAGGGA AGAGGCGGGT GGGGGGGGGG GAGAACGAAG GAGGTGTTGG ACGAGGGGAG CCGAGATGGG GCTTACGTTT ACCAAGCTGT TCTCGAGTCT GTTCTCGAAG AAGGAGATGC GGATCTTGAT GGTAGGTCTC GATGCGGCCG GAAAGACGAC TATCTTGTAT AAGTTGAAGC TCGGAGAGAT CGTGACCACC ATTCCTACCA TCGGGTTCAA TGTAGAGACC GTCGAGTACA AGAACATTAG CTTCACCGTA TGGGATGTCG GAGGTCAGGA CAAGATTCGT CCTCTGTGGA GGCACTACTT CCAGAACACA CAGGGTTTGA TCTTCGTGGT TGACAGTAAT GACAGAGATC GTGTCGTCGA GGCCCGCGAC GAGCTGCACC GGATGTTGAA CGAGGACGAG CTCCGCGGAG CCCTCTTGCT GGTGTTCGCT AACAAGCAGG ATCTGCCCAA CGCCATGAAC GCAGCTGAGA TCACCGACAA GCTCGGCCTG CACTCTCTGC GCCAGCGCCA CTGGTACATC CAGAGCACAT GCGCCACTTC AGGAGAGGGT CTGTACGAGG GGCTCGACTG GCTGTCGAGC AACATTGCCA GCAAGGCTTG ATTTACATAA CACAGCCTCA GATGTGTTAG ACTAGAGATG GGAAGAAAGC CTTATGGTAG TTCAACGCAG ACGTGGTCAC TCAAACTCGC TGGCGCCAGC TCTAGTGAGA TTTCTCTGTG ATAGTCAATC GATCTCACTC ACGGCAGTTG TGAGGTATCT GTGACGGTCA TTCGATCTCA CCCAAGGCAC TAGTGAGATA CCTGTGATGA CAGGAGTTGT TTATATTATG ATATACAGTC GCAGATTCTT ACCTTCACGT TGTTGATTAG TGACATTTTT AGGTCAACGG GATCGGTCTT GCGCGAAATT CTTTGTTGTA TTTCTTACTT CCACTCAACA AACCTCGAAG TCATTGCTTT CATTTGTCTA CTCTTCCTAT GACGCTCATT GATGTAGAAG CAGATACAGC GATTTTCTGG AAGGCGCTGT TCAAGATAGT TTGTTGAACA GTCTCTCTCC CACTGTGCGC GGTCGTACGT ACACGCCGCG TAGATTTGGA AGTTTCTATA AAAGCTGGTT GTTGTGAGCG AAAGCCT |
CDS |
| >Mp3g13920.1 ATGGGGCTTA CGTTTACCAA GCTGTTCTCG AGTCTGTTCT CGAAGAAGGA GATGCGGATC TTGATGGTAG GTCTCGATGC GGCCGGAAAG ACGACTATCT TGTATAAGTT GAAGCTCGGA GAGATCGTGA CCACCATTCC TACCATCGGG TTCAATGTAG AGACCGTCGA GTACAAGAAC ATTAGCTTCA CCGTATGGGA TGTCGGAGGT CAGGACAAGA TTCGTCCTCT GTGGAGGCAC TACTTCCAGA ACACACAGGG TTTGATCTTC GTGGTTGACA GTAATGACAG AGATCGTGTC GTCGAGGCCC GCGACGAGCT GCACCGGATG TTGAACGAGG ACGAGCTCCG CGGAGCCCTC TTGCTGGTGT TCGCTAACAA GCAGGATCTG CCCAACGCCA TGAACGCAGC TGAGATCACC GACAAGCTCG GCCTGCACTC TCTGCGCCAG CGCCACTGGT ACATCCAGAG CACATGCGCC ACTTCAGGAG AGGGTCTGTA CGAGGGGCTC GACTGGCTGT CGAGCAACAT TGCCAGCAAG GCTTGA |
Protein |
| >Mp3g13920.1 MGLTFTKLFS SLFSKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV VEARDELHRM LNEDELRGAL LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSSNIASK A |