Mp3g14960



Description

Annotation

Database ID Description
PANTHER PTHR37017 AB HYDROLASE-1 DOMAIN-CONTAINING PROTEIN-RELATED
Pfam PF12697 Alpha/beta hydrolase family
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
MapolyID Mapoly0004s0176 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPSK peptide Provisional

Associated Literature (AI-based literature mining, Beta-version)

peptide (from nomenclature)

0 core 1 peripheral

Furumizu, C., et al. (2021) · Plant Cell  review citation background
putative phytosulfokine

Transcript models

Transcript ID Location Sequences Extract region
Mp3g14960.1 chr3:15328612..15331140 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g14960 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g14960 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.