Mp3g15380
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR38389 | DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA |
| MapolyID | Mapoly0004s0134 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Characterized candidate peptide gene: expressed in antheridia and archegonia by GUS reporter, with chloroplast co-localization of the YFP fusion in transient assays.
1 core 0 peripheral
Kobayashi, H., et al. (2023)
· Frontiers in Plant Science research experimental subject
Characterized candidate peptide gene: expressed in antheridia and archegonia by GUS reporter, with chloroplast co-localization of the YFP fusion in transient assays.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g15380 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g15380.1 ACGACGATGC TCGACGTCGT ATGCTGCTGC GGGAGGTGAG GTTTGCACAA TTTGGCCACC GTCGAACTTG GGACGTGTCT GATGCGGGAG ATGTCGAGGG CGTTTGAGGA AGTGAGTTCT TCGTTACTGC GAATCGAGAG GGATTAATAG TGAGCATTTG ACGTGCCAAA TGGGGCCGAC TGCGCAGGCG CTTGGTTCAG CTCTTCCCCA GATTACGCGC ACGGTTACTT GTTTCAATCC TACATCTGGG AAGAAATTCG GGAATTCTTT CAGGCCTTGT GAATTGCTGC GGCGACCTTC AGCGGTCCAC ATCCGTTTCC TTCGGCAATC TGTGGGAAGG AGAAAGCCCG CGATTGTGGT CAGGTGTGAG CGTAATTCGG GGGAGACCGA AGAGAAATCT TCAGATGAGG ACAAGCCTTT TTTTTTATCG GCCGACTTTT GGTTGCAAGT CGCAATTTTT CTCTTTGCTG CCGGCTTTGT TGACGCAGGG TGAGTAGCAG TAGCCCATCT TCCCCCTGAG ATGTCTCCAG CCCCATATCT CAATTCCTTT CTGCCATCTT TAGGGTTTTC CCGGAAATGA GTGCCTTCAT CTTCAAGTAC GCGAGGAGAG TTCACTGGTC AGTGGACTCT TCTCCAAATT TGTACATGGT CTCGATGTTG GCTCACTGAT GCATGCATGC GATGCAGGTT CAGTGGAGAT TGGTCACGAA TAGGAGTGTT GACGAAGGAA ACAGAGGGAG AGCTGCAAAT GGCAGCAATT GGTGTTGTTC CCCTCGCCGG TACTTTGATT TGGTCAATAA GTCAGCGGAG AAAGCTCTGA AGGATGATCA GCTTCAAACA GAGAAGCCAG AGACCAATTG TGGTGATGCA ATTATAAGGC TTTCTGTATC CAATTTTCAT CCTCTTAGAT CTCAGTCGTT CGCCGAATGC TAGTGTCAAT GACGCTTACA AGTCCTCTGA ATCCAGTGCC TTCGAGATGA GGGAATCTTC CCTTGACTTC AAGCGAAAAG ACTTTGAATT TCCGTCCTTG CTTCATTTGA GGATTCAGAG GTAGAGATTC AAAGCAGCAG GTCATCGATG GCAATGATAC TTCCAGTAGT AGATATTTAA TATAGACGTT TGGACTGCAT CAACATTCAG CAAGAATGGG AAGAAATGAA GTACTACATG AGAACTCCGA ACTCTGTTGA ACTTCGCAGA TAGTTGATGG ATCAGGTCAG CAGTTTTGAG GATGGGGTGT TTCTGACAGC TACGAAAAGG ATCCCTTTTT TTTTCTAAGG AAGAGATGGC AATGTACATG CAGGGTGACA TCTGCCAGTA ATAGATGTGG AATGGGCAAC TATTTGTATG GAATGCCGTG GAATTGAATA GATATAGCGA GGATCTAGCA AACATAGAGT CTTGTCCTCA AGTTTTTCAG ATGAGTGGTG CTTGTGGAGA AGGTTCTGAG TAACGTGCAA ATTGATTTCG C |
mRNA UTR + CDS |
| >Mp3g15380.1 ACGACGATGC TCGACGTCGT ATGCTGCTGC GGGAGGTGAG GTTTGCACAA TTTGGCCACC GTCGAACTTG GGACGTGTCT GATGCGGGAG ATGTCGAGGG CGTTTGAGGA AGTGAGTTCT TCGTTACTGC GAATCGAGAG GGATTAATAG TGAGCATTTG ACGTGCCAAA TGGGGCCGAC TGCGCAGGCG CTTGGTTCAG CTCTTCCCCA GATTACGCGC ACGGTTACTT GTTTCAATCC TACATCTGGG AAGAAATTCG GGAATTCTTT CAGGCCTTGT GAATTGCTGC GGCGACCTTC AGCGGTCCAC ATCCGTTTCC TTCGGCAATC TGTGGGAAGG AGAAAGCCCG CGATTGTGGT CAGGTGTGAG CGTAATTCGG GGGAGACCGA AGAGAAATCT TCAGATGAGG ACAAGCCTTT TTTTTTATCG GCCGACTTTT GGTTGCAAGT CGCAATTTTT CTCTTTGCTG CCGGCTTTGT TGACGCAGGG TTCAGTGGAG ATTGGTCACG AATAGGAGTG TTGACGAAGG AAACAGAGGG AGAGCTGCAA ATGGCAGCAA TTGGTGTTGT TCCCCTCGCC GGTACTTTGA TTTGGTCAAT AAGTCAGCGG AGAAAGCTCT GAAGGATGAT CAGCTTCAAA CAGAGAAGCC AGAGACCAAT TGTGGTGATG CAATTATAAG GCTTTCTGTA TCCAATTTTC ATCCTCTTAG ATCTCAGTCG TTCGCCGAAT GCTAGTGTCA ATGACGCTTA CAAGTCCTCT GAATCCAGTG CCTTCGAGAT GAGGGAATCT TCCCTTGACT TCAAGCGAAA AGACTTTGAA TTTCCGTCCT TGCTTCATTT GAGGATTCAG AGGTAGAGAT TCAAAGCAGC AGGTCATCGA TGGCAATGAT ACTTCCAGTA GTAGATATTT AATATAGACG TTTGGACTGC ATCAACATTC AGCAAGAATG GGAAGAAATG AAGTACTACA TGAGAACTCC GAACTCTGTT GAACTTCGCA GATAGTTGAT GGATCAGGTC AGCAGTTTTG AGGATGGGGT GTTTCTGACA GCTACGAAAA GGATCCCTTT TTTTTTCTAA GGAAGAGATG GCAATGTACA TGCAGGGTGA CATCTGCCAG TAATAGATGT GGAATGGGCA ACTATTTGTA TGGAATGCCG TGGAATTGAA TAGATATAGC GAGGATCTAG CAAACATAGA GTCTTGTCCT CAAGTTTTTC AGATGAGTGG TGCTTGTGGA GAAGGTTCTG AGTAACGTGC AAATTGATTT CGC |
CDS |
| >Mp3g15380.1 ATGGGGCCGA CTGCGCAGGC GCTTGGTTCA GCTCTTCCCC AGATTACGCG CACGGTTACT TGTTTCAATC CTACATCTGG GAAGAAATTC GGGAATTCTT TCAGGCCTTG TGAATTGCTG CGGCGACCTT CAGCGGTCCA CATCCGTTTC CTTCGGCAAT CTGTGGGAAG GAGAAAGCCC GCGATTGTGG TCAGGTGTGA GCGTAATTCG GGGGAGACCG AAGAGAAATC TTCAGATGAG GACAAGCCTT TTTTTTTATC GGCCGACTTT TGGTTGCAAG TCGCAATTTT TCTCTTTGCT GCCGGCTTTG TTGACGCAGG GTTCAGTGGA GATTGGTCAC GAATAGGAGT GTTGACGAAG GAAACAGAGG GAGAGCTGCA AATGGCAGCA ATTGGTGTTG TTCCCCTCGC CGGTACTTTG ATTTGGTCAA TAAGTCAGCG GAGAAAGCTC TGA |
Protein |
| >Mp3g15380.1 MGPTAQALGS ALPQITRTVT CFNPTSGKKF GNSFRPCELL RRPSAVHIRF LRQSVGRRKP AIVVRCERNS GETEEKSSDE DKPFFLSADF WLQVAIFLFA AGFVDAGFSG DWSRIGVLTK ETEGELQMAA IGVVPLAGTL IWSISQRRKL |