Mp3g15750
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.10.110.10 | - |
| Pfam | PF00234 | Protease inhibitor/seed storage/LTP family |
| CDD | cd00010 | AAI_LTSS |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| MapolyID | Mapoly0004s0097 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLTPd8 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (from nomenclature)
0 core 1 peripheral
Huang, M. D., et al. (2023)
· BMC Plant Biology research sequence comparator
M. polymorpha Type D nsLTP included as a sequence label in the phylogenetic tree (Fig. 3); not functionally studied.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g15750 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g15750.1 AGATCTATCT CGTATATAAG CATTGGATCT TCACGTTTGC AATTGAATTC CACAATGGCT GCCCTGCAGA TGAGAAGATG CATATCTTTT TCGGTTGTGG TCGTCTTCAT AGTCCTGACT CATACCTTAG CACAAGTTGA AGGGCAATGT ATACTGAGTC CAGAGCTATG TAGTATGGAC GATGATGATT TCGACGTTAT ATTCGACACA TGCAAAGAGT TTAGTCAAGG AAATGCGATA CCCACTCCAG ATGATCTCTG CTGCCAGCAA CTTAACTCTC TTAGTGGCGA CTGTCTGTGT AAAGGATTTC AGGTTCATCT CTCCATCCTG CCACCAGATT ATAATCTGAC TGCACCTCTC CAGCTGCCTC GCAATTGTGG ATTCCCTCTT GATCCACCTG GCTGCAGTTG TGGAAGTAAG TACATGCATA AATATTGAAC TTGATTCAAA TCTTGACCTC GGTACATTCT GTTGCCATCT TTAGCAATGC ATGTGTAAAT TGGAAGTTAG TACTATATAG CAAATCAATT ATAGGTTTCC TAGACTCAAG ATTATGATAT TTGGACGACT GATATCACTC TGGCATTTCC ACTGCAGGTT ATACATTTCC GTCTTAGCTT TCCTCACCAA ATGAAAATCA GACTGGGTTA TAGGCAGATG GCGTTCTTTG TTTTGGCCAT GCCGATGGTC GTCAGACTGT TCTAAATTCC ATAATATGTG CGATTGTACC AGGGACTATC AGATAGTGAT TGTGCAGGTT TTAAGTAGGT AATAAATCTC TGGCAAGACC TTCCTAAACC ATCGAATATA TGTAATAAAG AGACTCTGAG GAATGAAACT ACACAGAAGC TGGCAGAGTT GTATACATTC TGTTCACTTG AATTGTTAAA AAGGAATGAT GTAACATTCC AGTTGTTTCA AACCGGGGAG CTGTGCAACA GTGTTATATT TCTGGAACAC AGTGGTATCA TAGCTCAAAG ATATCCACTG CAGGCTTTGT GCAGTTAATG ACTGAGCAGT AATATGAACG GAGATTATAT TTCATAACTC CTTTATGTGC TCTGTTATCT TATGAAGTAC |
mRNA UTR + CDS |
| >Mp3g15750.1 AGATCTATCT CGTATATAAG CATTGGATCT TCACGTTTGC AATTGAATTC CACAATGGCT GCCCTGCAGA TGAGAAGATG CATATCTTTT TCGGTTGTGG TCGTCTTCAT AGTCCTGACT CATACCTTAG CACAAGTTGA AGGGCAATGT ATACTGAGTC CAGAGCTATG TAGTATGGAC GATGATGATT TCGACGTTAT ATTCGACACA TGCAAAGAGT TTAGTCAAGG AAATGCGATA CCCACTCCAG ATGATCTCTG CTGCCAGCAA CTTAACTCTC TTAGTGGCGA CTGTCTGTGT AAAGGATTTC AGGTTCATCT CTCCATCCTG CCACCAGATT ATAATCTGAC TGCACCTCTC CAGCTGCCTC GCAATTGTGG ATTCCCTCTT GATCCACCTG GCTGCAGTTG TGGAAGTTAT ACATTTCCGT CTTAGCTTTC CTCACCAAAT GAAAATCAGA CTGGGTTATA GGCAGATGGC GTTCTTTGTT TTGGCCATGC CGATGGTCGT CAGACTGTTC TAAATTCCAT AATATGTGCG ATTGTACCAG GGACTATCAG ATAGTGATTG TGCAGGTTTT AAGTAGGTAA TAAATCTCTG GCAAGACCTT CCTAAACCAT CGAATATATG TAATAAAGAG ACTCTGAGGA ATGAAACTAC ACAGAAGCTG GCAGAGTTGT ATACATTCTG TTCACTTGAA TTGTTAAAAA GGAATGATGT AACATTCCAG TTGTTTCAAA CCGGGGAGCT GTGCAACAGT GTTATATTTC TGGAACACAG TGGTATCATA GCTCAAAGAT ATCCACTGCA GGCTTTGTGC AGTTAATGAC TGAGCAGTAA TATGAACGGA GATTATATTT CATAACTCCT TTATGTGCTC TGTTATCTTA TGAAGTAC |
CDS |
| >Mp3g15750.1 ATGGCTGCCC TGCAGATGAG AAGATGCATA TCTTTTTCGG TTGTGGTCGT CTTCATAGTC CTGACTCATA CCTTAGCACA AGTTGAAGGG CAATGTATAC TGAGTCCAGA GCTATGTAGT ATGGACGATG ATGATTTCGA CGTTATATTC GACACATGCA AAGAGTTTAG TCAAGGAAAT GCGATACCCA CTCCAGATGA TCTCTGCTGC CAGCAACTTA ACTCTCTTAG TGGCGACTGT CTGTGTAAAG GATTTCAGGT TCATCTCTCC ATCCTGCCAC CAGATTATAA TCTGACTGCA CCTCTCCAGC TGCCTCGCAA TTGTGGATTC CCTCTTGATC CACCTGGCTG CAGTTGTGGA AGTTATACAT TTCCGTCTTA G |
Protein |
| >Mp3g15750.1 MAALQMRRCI SFSVVVVFIV LTHTLAQVEG QCILSPELCS MDDDDFDVIF DTCKEFSQGN AIPTPDDLCC QQLNSLSGDC LCKGFQVHLS ILPPDYNLTA PLQLPRNCGF PLDPPGCSCG SYTFPS |