Mp3g17960
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MapolyID | Mapoly0140s0045 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Unannotated gene; listed in Table 1 as a candidate MpKAN-regulated DEG.
0 core 1 peripheral
Briginshaw, L. N., et al. (2022)
· New Phytologist research experimental background
Unannotated gene; listed in Table 1 as a candidate MpKAN-regulated DEG.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g17960 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g17960.1 AGCGCCGACG TTGTTTACAC CTCTCGGGCA AGAGTTACAG TAACAAAATG TGGGGAGAGT GGACTCGCGC TCTGCCATGG AAACACGATT ATTGGACGAG ACAAGTGTAA AATCTGCATG ATCTCATTCT CATCTCATCA TCACTTGCAG TCCTCGATTG GCAGTGACTG TCTGTCTCTC GATCCAGAGA GAACTGCAGC AGCATGAAAG AAGGACGAGA ACGTGCTGGT AAACGGGTGG GTCCCGGAGC ATGCAGCTGC TATAGATAGC TTAGTTTATC CTGAGCCCTT CGACCTTCCA TGTGCCTTTC CAGAGAAGCT GGAATTTTGT GGATACGATT TTATTCCTTT GCTTCCTTCC CCTTCTTTTC CAATTCATCG CTCTACCATC TGCTGTCTTG GCCCCTAACC CACCCAATGT TAGCGCGTCT CTTAAATTCC CCCCACCGTT CCTGCTCTCA GACAGGCCGG CTAAATTTGC CCCAGGCTCC AGCAGCACAG CTCTCAGACC GCCTGCTCAC GGTCCCTCTA CACTAGAAAG GGGATCCACT ACTCCGGAGT CCTCCGTACA TCATCAGACG CCGAGCAGAG AGCGAGAGTG GAGAGAAAGT GTGCCAGGAG CTTGGGACTA GTGTCGTCAA GCAGCGGGCA GCATGCAGTG ACAATCATTT GATCGCAAGC ATCTTCCTCC CTCCCACACC CTGCTATCAT TCTTATAAGA AGCCGAGAAA GCGAACCATC TAGTTGTCCT TCGAGGATAT CATCGACAGT TTGTAGAACA ATGCAGGTCC ATATGCAGCC CCAGCAGCAG AGGAGGAGCT TGGACTCGTC GGAGTTTACC ATCCGCTTGG AAGATCTGCA CTGCGGGCCC ATGGTGGGAG GCCTCGACTG GCTGAAACGT TTGTTCAAAG GAGCAGACAT TGCTTCTCTG CTCCCGGGCC ACAACAGGAA CCAGCATATG AACTCCGAGG AGCGTAGGAA CATGAGGAGG GCAAAATCTG CCAACCATGC TGCGGACCTC AAGGTCAGGC ATGTGTTCCC ACTGGCAGTG GACAGAAATC CGGCGTCGGT GTCATTCAGA GAACCCCCAA CTTTCAGAGC TCCTCCACCT GTCTTCCGGG TCACAGGAAT GCATTTGTGG TGAAGATGTC CGGATCAGTC TGTGGTTCTG GCCCTCACCA TAATCATCTC CCCAATTTTT CTCCCAGTTA CCGAATCATT TGCAGCTCTG GACTGTCCCT GTCTGCTCTG TGGGTATTAT CGTCCTGGCG AGCATCATCT CTCGCCCATT CTCCTTTCTA TTTGCCGAAA TGAAACGAAG GGCTTATTGC TCTTCGCATT TGCGTTCTTG TCTGGTACCT TGGCCTCTCC CCGGGCTCTT GGGTTAACAA TTGTCAAGAG CTCGACGGTC CGCAGCAACT CCCTATGCTT CTGAATGGTC GAGTTCGTTT GAGCACAGAA TCCTGCGACT ACGACTTCGA GTTCGACTTC AACGGAGAGC AGAATCCTGC ACCGTGTCCG GTTTTTTTTA TTAGTCAGGA TACGGAGCTG AGGATAGATG AAGAAAGGAA AGGACGGTGG AGAGAATCAG AAGGTGGACC TCGTAGGACG TGCTTCTAGT GTGGCTGCCA CTGGCACGCC ATACAGTGCA GTGCAGTGAA GAAGAAGGTT GTCATGAGTC TGAATCATAG TTGAATGCGA GACATTAAAG TGTCTGTTTA TGTTGAACGG TGCAGTTGCT GCTGCAGCTG GATTGAAGCA TGCCATCAGC CCATTGTGAA TATTCTTCAT CAATCTAAAT GCAATTTTGT CTAAGAGGTT CAGAACGTCA TGTCGACCCC CGGTTTGCTC TTCCTCCCTC TCTCCCTCCT GAATACGATG AGACTACGCA CTCTGGCAAT GACGAAGGTT TGTGTCCATT CTTGCCTGCA CGAAGGTCGT TTCCACTATT CTACTTTTCA TAGATGTATC TTCTCACCCT GCTAATCGTG GTCGCTCCCT TGAGAAATTT CGTTTCTTCT TCCCTCCATG AGGGCCTTCT GGCTATGGGT TCCAGATGAG CACAAGCTCG TAGTTCTTCG AACAGTTCAA ACATCCCTAT CGACTTTGAG CATCAGCAAC CATAGTAGCG CTCGAAAGAA CCAGGGTACT TGTCGTGAGT TCAGATGCAA GCTTTCGCAA CATCGGCCTT TCCTAATGCC GAAGGTAGAT AGCCGCTGCG GATGATTCCG CACATATACC ACTCGCTCAA TGATGGCTTT AGTGAAGGAA CGCGGAGTTG TACATACTTA GCTGTCCGTG GACTCTGCTT GTTACACATC CCGTGCCGGA GTGAAAGTCA ATTTTGTGGG GCTTCTTCTG ATTGTCGATT GCAATAGCTC AGCATGGGGG CTTGAATGCA ATTCTTCGTG CATCTTTGAT CTCAGGCAGT GAAACTGAAG GCACTCCGAA GGCGCAGTGC TCCGTTGTTA ATCTCGTAGA GAATGGATAT AGGCCACAAT GTTTGAGCAT GGTGCTCCCA CCATGCTCAG CATTCGG |
mRNA UTR + CDS |
| >Mp3g17960.1 AGCGCCGACG TTGTTTACAC CTCTCGGGCA AGAGTTACAG TAACAAAATG TGGGGAGAGT GGACTCGCGC TCTGCCATGG AAACACGATT ATTGGACGAG ACAAGTGTAA AATCTGCATG ATCTCATTCT CATCTCATCA TCACTTGCAG TCCTCGATTG GCAGTGACTG TCTGTCTCTC GATCCAGAGA GAACTGCAGC AGCATGAAAG AAGGACGAGA ACGTGCTGGT AAACGGGTGG GTCCCGGAGC ATGCAGCTGC TATAGATAGC TTAGTTTATC CTGAGCCCTT CGACCTTCCA TGTGCCTTTC CAGAGAAGCT GGAATTTTGT GGATACGATT TTATTCCTTT GCTTCCTTCC CCTTCTTTTC CAATTCATCG CTCTACCATC TGCTGTCTTG GCCCCTAACC CACCCAATGT TAGCGCGTCT CTTAAATTCC CCCCACCGTT CCTGCTCTCA GACAGGCCGG CTAAATTTGC CCCAGGCTCC AGCAGCACAG CTCTCAGACC GCCTGCTCAC GGTCCCTCTA CACTAGAAAG GGGATCCACT ACTCCGGAGT CCTCCGTACA TCATCAGACG CCGAGCAGAG AGCGAGAGTG GAGAGAAAGT GTGCCAGGAG CTTGGGACTA GTGTCGTCAA GCAGCGGGCA GCATGCAGTG ACAATCATTT GATCGCAAGC ATCTTCCTCC CTCCCACACC CTGCTATCAT TCTTATAAGA AGCCGAGAAA GCGAACCATC TAGTTGTCCT TCGAGGATAT CATCGACAGT TTGTAGAACA ATGCAGGTCC ATATGCAGCC CCAGCAGCAG AGGAGGAGCT TGGACTCGTC GGAGTTTACC ATCCGCTTGG AAGATCTGCA CTGCGGGCCC ATGGTGGGAG GCCTCGACTG GCTGAAACGT TTGTTCAAAG GAGCAGACAT TGCTTCTCTG CTCCCGGGCC ACAACAGGAA CCAGCATATG AACTCCGAGG AGCGTAGGAA CATGAGGAGG GCAAAATCTG CCAACCATGC TGCGGACCTC AAGGTCAGGC ATGTGTTCCC ACTGGCAGTG GACAGAAATC CGGCGTCGGT GTCATTCAGA GAACCCCCAA CTTTCAGAGC TCCTCCACCT GTCTTCCGGG TCACAGGAAT GCATTTGTGG TGAAGATGTC CGGATCAGTC TGTGGTTCTG GCCCTCACCA TAATCATCTC CCCAATTTTT CTCCCAGTTA CCGAATCATT TGCAGCTCTG GACTGTCCCT GTCTGCTCTG TGGGTATTAT CGTCCTGGCG AGCATCATCT CTCGCCCATT CTCCTTTCTA TTTGCCGAAA TGAAACGAAG GGCTTATTGC TCTTCGCATT TGCGTTCTTG TCTGGTACCT TGGCCTCTCC CCGGGCTCTT GGGTTAACAA TTGTCAAGAG CTCGACGGTC CGCAGCAACT CCCTATGCTT CTGAATGGTC GAGTTCGTTT GAGCACAGAA TCCTGCGACT ACGACTTCGA GTTCGACTTC AACGGAGAGC AGAATCCTGC ACCGTGTCCG GTTTTTTTTA TTAGTCAGGA TACGGAGCTG AGGATAGATG AAGAAAGGAA AGGACGGTGG AGAGAATCAG AAGGTGGACC TCGTAGGACG TGCTTCTAGT GTGGCTGCCA CTGGCACGCC ATACAGTGCA GTGCAGTGAA GAAGAAGGTT GTCATGAGTC TGAATCATAG TTGAATGCGA GACATTAAAG TGTCTGTTTA TGTTGAACGG TGCAGTTGCT GCTGCAGCTG GATTGAAGCA TGCCATCAGC CCATTGTGAA TATTCTTCAT CAATCTAAAT GCAATTTTGT CTAAGAGGTT CAGAACGTCA TGTCGACCCC CGGTTTGCTC TTCCTCCCTC TCTCCCTCCT GAATACGATG AGACTACGCA CTCTGGCAAT GACGAAGGTT TGTGTCCATT CTTGCCTGCA CGAAGGTCGT TTCCACTATT CTACTTTTCA TAGATGTATC TTCTCACCCT GCTAATCGTG GTCGCTCCCT TGAGAAATTT CGTTTCTTCT TCCCTCCATG AGGGCCTTCT GGCTATGGGT TCCAGATGAG CACAAGCTCG TAGTTCTTCG AACAGTTCAA ACATCCCTAT CGACTTTGAG CATCAGCAAC CATAGTAGCG CTCGAAAGAA CCAGGGTACT TGTCGTGAGT TCAGATGCAA GCTTTCGCAA CATCGGCCTT TCCTAATGCC GAAGGTAGAT AGCCGCTGCG GATGATTCCG CACATATACC ACTCGCTCAA TGATGGCTTT AGTGAAGGAA CGCGGAGTTG TACATACTTA GCTGTCCGTG GACTCTGCTT GTTACACATC CCGTGCCGGA GTGAAAGTCA ATTTTGTGGG GCTTCTTCTG ATTGTCGATT GCAATAGCTC AGCATGGGGG CTTGAATGCA ATTCTTCGTG CATCTTTGAT CTCAGGCAGT GAAACTGAAG GCACTCCGAA GGCGCAGTGC TCCGTTGTTA ATCTCGTAGA GAATGGATAT AGGCCACAAT GTTTGAGCAT GGTGCTCCCA CCATGCTCAG CATTCGG |
CDS |
| >Mp3g17960.1 ATGCAGGTCC ATATGCAGCC CCAGCAGCAG AGGAGGAGCT TGGACTCGTC GGAGTTTACC ATCCGCTTGG AAGATCTGCA CTGCGGGCCC ATGGTGGGAG GCCTCGACTG GCTGAAACGT TTGTTCAAAG GAGCAGACAT TGCTTCTCTG CTCCCGGGCC ACAACAGGAA CCAGCATATG AACTCCGAGG AGCGTAGGAA CATGAGGAGG GCAAAATCTG CCAACCATGC TGCGGACCTC AAGGTCAGGC ATGTGTTCCC ACTGGCAGTG GACAGAAATC CGGCGTCGGT GTCATTCAGA GAACCCCCAA CTTTCAGAGC TCCTCCACCT GTCTTCCGGG TCACAGGAAT GCATTTGTGG TGA |
Protein |
| >Mp3g17960.1 MQVHMQPQQQ RRSLDSSEFT IRLEDLHCGP MVGGLDWLKR LFKGADIASL LPGHNRNQHM NSEERRNMRR AKSANHAADL KVRHVFPLAV DRNPASVSFR EPPTFRAPPP VFRVTGMHLW |