Mp3g18510
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR10291 | DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER |
| SUPERFAMILY | SSF64005 | Undecaprenyl diphosphate synthase |
| Pfam | PF01255 | Putative undecaprenyl diphosphate synthase |
| Gene3D | G3DSA:3.40.1180.10 | - |
| Hamap | MF_01139 | Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. |
| CDD | cd00475 | Cis_IPPS |
| NCBIfam | TIGR00055 | polyprenyl diphosphate synthase |
| ProSitePatterns | PS01066 | Undecaprenyl pyrophosphate synthase family signature. |
| KOG | KOG1602 | Cis-prenyltransferase; [I] |
| MapolyID | Mapoly0142s0042 | - |
| GO | GO:0016094 | polyprenol biosynthetic process |
| GO | GO:0002094 | polyprenyltransferase activity |
| GO | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCPT5 | Secondary metabolism enzyme, Terpene biosynthesis enzymes | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Secondary metabolism enzyme, Terpene biosynthesis enzymes (from nomenclature)
0 core 1 peripheral
Romani, F., et al. (2020)
· Current Biology research experimental background
cis-prenyltransferase (Mp3g18510); MpC1HDZ-regulated terpene biosynthesis gene.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g18510 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g18510.1 TTCAAGCTAA CCATATTAAT ACCTAAGATC AGATTCTAAC ATGCAGCAAG TTTATCGAAG CCTCGGACCA AAGCGCTTAA GTATCACAAT TTCAGCTGAG TGAATCCTGT TAGCAGTCGG CTCTGCTTCA TGGAGTCTGT GGTGGCAAGA TGTGTGAATC TGAAATCCGT ACAATTGTCC ACGATTTACA AGACGCATTG TGAAGCTGCA GCACCGATGG AGCTAAGCAT GAGTAGATCA ACGATACCTG GCGCGAGCAT CAGCAGTCAC CGAGCTCGTG AACTTCGTGT TTCACTCTCC AGAACACTCG GCCGCAAGCC GTTTCCTGGT GCGCCAGTGA ATGGCTGCGT TGGTATGTTG CATGAGACAG CCGGGACCGC ATCAGCTGAC AGTTGTGCAG ATCTGAGCCA GACGAAGAGG AGGATCGAAC TTCCCCCTGA ACTGAATCCT GAGGTAATGC CCAAGCATGT TGCTCTTATC TTAGATGGCA ACAATCGTTA CTCGAAGGCG AGAGGCGTGA GGGGAAGTGA AGGCTTCGAA GTTGGGCTCA AGAAGAGTCT CAAAGACGCT GTGAGAGTCA GCGTTGATTG GGGAATCGAG ATACTCACAC TCTTTTACTT TTCTTACGAC AATTGGAATC GAGAAAAGGT TATTTCTAAA ACCCATTTCC GGTTATATTG CAGTTTAAAG AGCGTAACAT GTTATGTCCG GACCCGTTTA GAGTTCTTCA TGCTTAGGTG TGCCCAGAAT ATCGTCAAGG TGTTGTAAGT TAGGTTCCAG TTTGATGACA CTGCATGACC AGCGGTAGAT GTGGACTTGA TGGTTCTGAA GCGGAAGGTG TGATGGAGGT TGGATACAGG TTGAAGTTGA AACAATATTT GGGCTTTTCG AGATATATCT GATCAAGTAC AGAGAAGCCG TAATGAGGTC AGAAAACCTG GCTTTTGTTT CGTTATCTGT TTCAAATTCT CTAAAAGTAC TGTCCATATT CCTCCCTAAT ACTAGAAAAA ATTTCATGAT GGTTGAGTTA AAACAATCTA TATTTTTGTA TCTGTCAGTT ACTATCTCTT GCGTAAATAT CACAGCATTT GGCAATGCCC TGCGGCCTGG CCTTGATGAT CTATAACGAA AGTTTATACG CTGTTGATTG TACAGGTATA ACATTCAGTT TTCGGTCATG GGCACCCCAG AGAGATTTCC TGAGACTTTG CAAAAACTGG TGGCTAAGGT GACGGAAGAG TCTCGCAACA ACAAGGGACT GAAGGTTGTT GTGGCAGCCG GGTACGGTGG AAGACAGGAC ATTCTTCAAG CTACGCAAAG AATATCTCAA CTGGTGGCTA ACACAGAACT CTCCATCGAT GAGATAACAC TGGAGGTGTT CGAGTCACAC CTCATGACAA AAAACGTGAA TCCATCCAGT GTTGATCTTA TGATTCGAAC AAGCGGAGAG CAGAGAATTA GCAACTTCCT TCTATGGCAG ACGGCGTGGA CCGAGTTTGT ATTTTTGAAG GAAAACTGGC CCGAGTTTAG ACGTGATTCG ATGAAGAATG CGCTAATCAG TTACCAGTCT AGGGACCGAA GGCTTGGTCT AAGACAGACC AAGTTCTGAA TCAAATCAAT TGCAGATACA TCGCAAGAAG TGCAGCATAT CTTCACAACG AAGTTCTTAT TAGAGCTAGA CAAGAGAAAG CGTGAGACTG GTTCAGCATA CTATGGAAAC ATTGTCAATG GAAGTGTAAG ACAGGAAGCG TATGGTTGTG CTACTCTCTA TCTTTCTATT CATCGTGTTG GCAGATAGAG GATGCGCACA GCAGCAGTCA CACTTCTGAC TGCGATTAAA GGGGAAGAAC CCAGTGGACT TCTATAAGTT TTTATTACTA AAGACTCGCT GATTATTTAT AGAACCTCAC GA |
mRNA UTR + CDS |
| >Mp3g18510.1 TTCAAGCTAA CCATATTAAT ACCTAAGATC AGATTCTAAC ATGCAGCAAG TTTATCGAAG CCTCGGACCA AAGCGCTTAA GTATCACAAT TTCAGCTGAG TGAATCCTGT TAGCAGTCGG CTCTGCTTCA TGGAGTCTGT GGTGGCAAGA TGTGTGAATC TGAAATCCGT ACAATTGTCC ACGATTTACA AGACGCATTG TGAAGCTGCA GCACCGATGG AGCTAAGCAT GAGTAGATCA ACGATACCTG GCGCGAGCAT CAGCAGTCAC CGAGCTCGTG AACTTCGTGT TTCACTCTCC AGAACACTCG GCCGCAAGCC GTTTCCTGGT GCGCCAGTGA ATGGCTGCGT TGGTATGTTG CATGAGACAG CCGGGACCGC ATCAGCTGAC AGTTGTGCAG ATCTGAGCCA GACGAAGAGG AGGATCGAAC TTCCCCCTGA ACTGAATCCT GAGGTAATGC CCAAGCATGT TGCTCTTATC TTAGATGGCA ACAATCGTTA CTCGAAGGCG AGAGGCGTGA GGGGAAGTGA AGGCTTCGAA GTTGGGCTCA AGAAGAGTCT CAAAGACGCT GTGAGAGTCA GCGTTGATTG GGGAATCGAG ATACTCACAC TCTTTTACTT TTCTTACGAC AATTGGAATC GAGAAAAGGT TGAAGTTGAA ACAATATTTG GGCTTTTCGA GATATATCTG ATCAAGTACA GAGAAGCCGT AATGAGGTAT AACATTCAGT TTTCGGTCAT GGGCACCCCA GAGAGATTTC CTGAGACTTT GCAAAAACTG GTGGCTAAGG TGACGGAAGA GTCTCGCAAC AACAAGGGAC TGAAGGTTGT TGTGGCAGCC GGGTACGGTG GAAGACAGGA CATTCTTCAA GCTACGCAAA GAATATCTCA ACTGGTGGCT AACACAGAAC TCTCCATCGA TGAGATAACA CTGGAGGTGT TCGAGTCACA CCTCATGACA AAAAACGTGA ATCCATCCAG TGTTGATCTT ATGATTCGAA CAAGCGGAGA GCAGAGAATT AGCAACTTCC TTCTATGGCA GACGGCGTGG ACCGAGTTTG TATTTTTGAA GGAAAACTGG CCCGAGTTTA GACGTGATTC GATGAAGAAT GCGCTAATCA GTTACCAGTC TAGGGACCGA AGGCTTGGTC TAAGACAGAC CAAGTTCTGA ATCAAATCAA TTGCAGATAC ATCGCAAGAA GTGCAGCATA TCTTCACAAC GAAGTTCTTA TTAGAGCTAG ACAAGAGAAA GCGTGAGACT GGTTCAGCAT ACTATGGAAA CATTGTCAAT GGAAGTGTAA GACAGGAAGC GTATGGTTGT GCTACTCTCT ATCTTTCTAT TCATCGTGTT GGCAGATAGA GGATGCGCAC AGCAGCAGTC ACACTTCTGA CTGCGATTAA AGGGGAAGAA CCCAGTGGAC TTCTATAAGT TTTTATTACT AAAGACTCGC TGATTATTTA TAGAACCTCA CGA |
CDS |
| >Mp3g18510.1 ATGGAGTCTG TGGTGGCAAG ATGTGTGAAT CTGAAATCCG TACAATTGTC CACGATTTAC AAGACGCATT GTGAAGCTGC AGCACCGATG GAGCTAAGCA TGAGTAGATC AACGATACCT GGCGCGAGCA TCAGCAGTCA CCGAGCTCGT GAACTTCGTG TTTCACTCTC CAGAACACTC GGCCGCAAGC CGTTTCCTGG TGCGCCAGTG AATGGCTGCG TTGGTATGTT GCATGAGACA GCCGGGACCG CATCAGCTGA CAGTTGTGCA GATCTGAGCC AGACGAAGAG GAGGATCGAA CTTCCCCCTG AACTGAATCC TGAGGTAATG CCCAAGCATG TTGCTCTTAT CTTAGATGGC AACAATCGTT ACTCGAAGGC GAGAGGCGTG AGGGGAAGTG AAGGCTTCGA AGTTGGGCTC AAGAAGAGTC TCAAAGACGC TGTGAGAGTC AGCGTTGATT GGGGAATCGA GATACTCACA CTCTTTTACT TTTCTTACGA CAATTGGAAT CGAGAAAAGG TTGAAGTTGA AACAATATTT GGGCTTTTCG AGATATATCT GATCAAGTAC AGAGAAGCCG TAATGAGGTA TAACATTCAG TTTTCGGTCA TGGGCACCCC AGAGAGATTT CCTGAGACTT TGCAAAAACT GGTGGCTAAG GTGACGGAAG AGTCTCGCAA CAACAAGGGA CTGAAGGTTG TTGTGGCAGC CGGGTACGGT GGAAGACAGG ACATTCTTCA AGCTACGCAA AGAATATCTC AACTGGTGGC TAACACAGAA CTCTCCATCG ATGAGATAAC ACTGGAGGTG TTCGAGTCAC ACCTCATGAC AAAAAACGTG AATCCATCCA GTGTTGATCT TATGATTCGA ACAAGCGGAG AGCAGAGAAT TAGCAACTTC CTTCTATGGC AGACGGCGTG GACCGAGTTT GTATTTTTGA AGGAAAACTG GCCCGAGTTT AGACGTGATT CGATGAAGAA TGCGCTAATC AGTTACCAGT CTAGGGACCG AAGGCTTGGT CTAAGACAGA CCAAGTTCTG A |
Protein |
| >Mp3g18510.1 MESVVARCVN LKSVQLSTIY KTHCEAAAPM ELSMSRSTIP GASISSHRAR ELRVSLSRTL GRKPFPGAPV NGCVGMLHET AGTASADSCA DLSQTKRRIE LPPELNPEVM PKHVALILDG NNRYSKARGV RGSEGFEVGL KKSLKDAVRV SVDWGIEILT LFYFSYDNWN REKVEVETIF GLFEIYLIKY REAVMRYNIQ FSVMGTPERF PETLQKLVAK VTEESRNNKG LKVVVAAGYG GRQDILQATQ RISQLVANTE LSIDEITLEV FESHLMTKNV NPSSVDLMIR TSGEQRISNF LLWQTAWTEF VFLKENWPEF RRDSMKNALI SYQSRDRRLG LRQTKF |