Mp3g19670
Description
Annotation
| Database | ID | Description |
|---|---|---|
| CDD | cd19821 | Bbox1_BBX-like |
| Pfam | PF00643 | B-box zinc finger |
| PANTHER | PTHR31874 | CCT MOTIF FAMILY PROTEIN, EXPRESSED |
| Pfam | PF06203 | CCT motif |
| ProSiteProfiles | PS50119 | Zinc finger B-box type profile. |
| ProSiteProfiles | PS51017 | CCT domain profile. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SMART | SM00336 | bboxneu5 |
| KOG | KOG1601 | GATA-4/5/6 transcription factors; N-term missing; [K] |
| MapolyID | Mapoly0049s0067 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0005634 | nucleus |
| GO | GO:0005515 | protein binding |
| GO | GO:0008270 | zinc ion binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpBBX3 | transcription factor, BBX | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, BBX (from nomenclature)
0 core 2 peripheral
Flores-Sandoval, E., et al. (2018b)
· Frontiers in Plant Science research experimental background
B-box zinc finger gene listed among differentially expressed genes (logFC 8.4, logCPM 5.7) in co-expression analysis.
Roetzer J, Asper B, Meir Z, Edelbacher N, Merai Z, Datta S, Dolan L. (2026)
· Current biology : CB research experimental background
B-box gene among the light-induced responsive set.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g19670 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g19670.1 AGATTGAGAG ATATAGATTG AGAGAGCGAG AGCTAGGAAC CGGCAGTGAG CTCGGACGAT TCGCAGTTGA ATCCATGGTT GTCGAATTTG GTGGATGATT GCAAGCTTGT GATCCGATAG TGTCCCTGGA AATGGAACGC CTCATCGCCT CGTGCGAGAG AGGTCAATAT TTTTCGTGTC GAAGGTCGAA CCAGCCGCAG CTTCTGAGCC CAATTGGAAA CGAGGGATCG TCAAGTGGCG GAGACGACGG CGGCGAGAGT GAAAATATCT CGAGTGGAAG GTGACGAAGG GAGGGAGGCC GGAGGTGGTT GGTTAGTCGA TGCGCTATAG ACCCCTTGCT GCCAGGAAGA AGCTTTGAGT GAGGTCTCGA GAGTTGTTGT TCGATTGTGT TCCCCGCAGT GCCATTTTTT GTGTTTTCCC AACTCGAGAA GGTCGCTGAG ATGACTGCCA CTACCGAAGA CAGGTCGATG GATCCCAAAA CCGCAACAGC CGTGATGTCC ATGGCCGGAC GGGCCGTGCG TGCATGCGAC GTCTGCGGGC GCGACCGCGC TCGATGGTAT TGCGCCGCCG ACGAAGCTTA CCTTTGTGGA CGCTGCGACA ATTCCATTCA CTGCGTCAAT GCTTTGGCGT CGCGCCACGA GCGCGTGCGC CTGAACCCCA ATGGAACGGC ATGCAAGGGC GGCGAGCGCA CCTCGTCCAA GTCCTTCCCC GGGCTGCAAA TCCGGAAGAG CAGCAAATCC CTGAAGCACC ACGTGAACCC CAAGATGCGC ATGATCAAGG ACGAAATGCT CGCGCAAAGT TTTTTCTCCA ACCCCGACGA CACCTCGCGA GTGCCCGGGT ACCCCGAGAG CCTTCCGGAG GACGAAAGCT CGCGGCTCGG CCTCCCCGCC TACGTCCCCG ATCTGCAAGC ATCCGTGGAC GACCTCGGAG GGGACGGCAG CGCCAGCGAT GGGTTTCCCA TGGACATGCC CCAGGAGCTG GATTCTCTCG AGAGGGGCGA CGAGGACTGC GTCGGCGGGA GCGACGATGA GTACCTGGAC TTTACAGACA TCGTCACCGA GGCGGATTTT CTCGACGACA AAGGAGACGA GGGATCTGTG TTCAGTCTAG ACGACATCAA ATCAGAACAC TGTCACGATG CCGTGAAGAA CGAGGGGTTC GGCCAATTCC AGCCCGTCTG CAACGACGGC TTCGAGTCGA TTAATGTCAA AGTGGAGAAG GACGGGTCGT TGTTCCACCA GACGCAACAG TTCAGTGAGG AGGGCCAGAC TAAGTGCCTG TCGCTGAAAT TGAATTACGA GGACGTCCTG AGCGCATGGT CGGGACGAGG TCCGCTGTGG ACTGAGGATG GGGGTCAACC CCAAACCGTG CCAATTCTCT CGAATATTGA TATGGCGCTG AACCTGGACC TCGAGAGCTA CCACAGAGAA CAATTAGGCG AGGTCCCCGT GCTCGGGATG GGAGAGGAGG TGTCGGAAGT CGGAGTCGGA CGCGAGGCTC GAGTCATGAG ATATCGAGAA AAGCGCCGCA CTCGACTCTT CTCCAAACAG ATACGATACG AAGTGCGCAA GCTGAACGCC GAGCGCCGCC CACGTATGAA GGGCCGCTTC GTCAAGCGAC TGCCGCCATG ATTGTGGGGT ACCTTTCTGC TTCTCTTCGG GGCCCCGGTA CATCGAGCGG TGATATGTTT TTAGTTATTA TCATGAATTT AGTTAGGGAG GACGGAGAGG GAGAGATTGG AGAGACCGAG ACCGAGCGGA AGAAGAGATG TACAAATTTG ACGACATATC CAAGCGGAAC GCTTTTGTGA ATTAGTAAGT TCGAGCAGAG AGAATGGAAG ATTTCGCCTG ATAGTCCACC TGCTTTCATG CACGTGGGAA GGAGCACTTA AAAATAAAGA CCGTGCGAAA ATGTACAAAT GCGCTGATTA TTCCAGCTGA AATCCATAAA TTTTTGATTA CCTACTCG |
mRNA UTR + CDS |
| >Mp3g19670.1 AGATTGAGAG ATATAGATTG AGAGAGCGAG AGCTAGGAAC CGGCAGTGAG CTCGGACGAT TCGCAGTTGA ATCCATGGTT GTCGAATTTG GTGGATGATT GCAAGCTTGT GATCCGATAG TGTCCCTGGA AATGGAACGC CTCATCGCCT CGTGCGAGAG AGGTCAATAT TTTTCGTGTC GAAGGTCGAA CCAGCCGCAG CTTCTGAGCC CAATTGGAAA CGAGGGATCG TCAAGTGGCG GAGACGACGG CGGCGAGAGT GAAAATATCT CGAGTGGAAG GTGACGAAGG GAGGGAGGCC GGAGGTGGTT GGTTAGTCGA TGCGCTATAG ACCCCTTGCT GCCAGGAAGA AGCTTTGAGT GAGGTCTCGA GAGTTGTTGT TCGATTGTGT TCCCCGCAGT GCCATTTTTT GTGTTTTCCC AACTCGAGAA GGTCGCTGAG ATGACTGCCA CTACCGAAGA CAGGTCGATG GATCCCAAAA CCGCAACAGC CGTGATGTCC ATGGCCGGAC GGGCCGTGCG TGCATGCGAC GTCTGCGGGC GCGACCGCGC TCGATGGTAT TGCGCCGCCG ACGAAGCTTA CCTTTGTGGA CGCTGCGACA ATTCCATTCA CTGCGTCAAT GCTTTGGCGT CGCGCCACGA GCGCGTGCGC CTGAACCCCA ATGGAACGGC ATGCAAGGGC GGCGAGCGCA CCTCGTCCAA GTCCTTCCCC GGGCTGCAAA TCCGGAAGAG CAGCAAATCC CTGAAGCACC ACGTGAACCC CAAGATGCGC ATGATCAAGG ACGAAATGCT CGCGCAAAGT TTTTTCTCCA ACCCCGACGA CACCTCGCGA GTGCCCGGGT ACCCCGAGAG CCTTCCGGAG GACGAAAGCT CGCGGCTCGG CCTCCCCGCC TACGTCCCCG ATCTGCAAGC ATCCGTGGAC GACCTCGGAG GGGACGGCAG CGCCAGCGAT GGGTTTCCCA TGGACATGCC CCAGGAGCTG GATTCTCTCG AGAGGGGCGA CGAGGACTGC GTCGGCGGGA GCGACGATGA GTACCTGGAC TTTACAGACA TCGTCACCGA GGCGGATTTT CTCGACGACA AAGGAGACGA GGGATCTGTG TTCAGTCTAG ACGACATCAA ATCAGAACAC TGTCACGATG CCGTGAAGAA CGAGGGGTTC GGCCAATTCC AGCCCGTCTG CAACGACGGC TTCGAGTCGA TTAATGTCAA AGTGGAGAAG GACGGGTCGT TGTTCCACCA GACGCAACAG TTCAGTGAGG AGGGCCAGAC TAAGTGCCTG TCGCTGAAAT TGAATTACGA GGACGTCCTG AGCGCATGGT CGGGACGAGG TCCGCTGTGG ACTGAGGATG GGGGTCAACC CCAAACCGTG CCAATTCTCT CGAATATTGA TATGGCGCTG AACCTGGACC TCGAGAGCTA CCACAGAGAA CAATTAGGCG AGGTCCCCGT GCTCGGGATG GGAGAGGAGG TGTCGGAAGT CGGAGTCGGA CGCGAGGCTC GAGTCATGAG ATATCGAGAA AAGCGCCGCA CTCGACTCTT CTCCAAACAG ATACGATACG AAGTGCGCAA GCTGAACGCC GAGCGCCGCC CACGTATGAA GGGCCGCTTC GTCAAGCGAC TGCCGCCATG ATTGTGGGGT ACCTTTCTGC TTCTCTTCGG GGCCCCGGTA CATCGAGCGG TGATATGTTT TTAGTTATTA TCATGAATTT AGTTAGGGAG GACGGAGAGG GAGAGATTGG AGAGACCGAG ACCGAGCGGA AGAAGAGATG TACAAATTTG ACGACATATC CAAGCGGAAC GCTTTTGTGA ATTAGTAAGT TCGAGCAGAG AGAATGGAAG ATTTCGCCTG ATAGTCCACC TGCTTTCATG CACGTGGGAA GGAGCACTTA AAAATAAAGA CCGTGCGAAA ATGTACAAAT GCGCTGATTA TTCCAGCTGA AATCCATAAA TTTTTGATTA CCTACTCG |
CDS |
| >Mp3g19670.1 ATGACTGCCA CTACCGAAGA CAGGTCGATG GATCCCAAAA CCGCAACAGC CGTGATGTCC ATGGCCGGAC GGGCCGTGCG TGCATGCGAC GTCTGCGGGC GCGACCGCGC TCGATGGTAT TGCGCCGCCG ACGAAGCTTA CCTTTGTGGA CGCTGCGACA ATTCCATTCA CTGCGTCAAT GCTTTGGCGT CGCGCCACGA GCGCGTGCGC CTGAACCCCA ATGGAACGGC ATGCAAGGGC GGCGAGCGCA CCTCGTCCAA GTCCTTCCCC GGGCTGCAAA TCCGGAAGAG CAGCAAATCC CTGAAGCACC ACGTGAACCC CAAGATGCGC ATGATCAAGG ACGAAATGCT CGCGCAAAGT TTTTTCTCCA ACCCCGACGA CACCTCGCGA GTGCCCGGGT ACCCCGAGAG CCTTCCGGAG GACGAAAGCT CGCGGCTCGG CCTCCCCGCC TACGTCCCCG ATCTGCAAGC ATCCGTGGAC GACCTCGGAG GGGACGGCAG CGCCAGCGAT GGGTTTCCCA TGGACATGCC CCAGGAGCTG GATTCTCTCG AGAGGGGCGA CGAGGACTGC GTCGGCGGGA GCGACGATGA GTACCTGGAC TTTACAGACA TCGTCACCGA GGCGGATTTT CTCGACGACA AAGGAGACGA GGGATCTGTG TTCAGTCTAG ACGACATCAA ATCAGAACAC TGTCACGATG CCGTGAAGAA CGAGGGGTTC GGCCAATTCC AGCCCGTCTG CAACGACGGC TTCGAGTCGA TTAATGTCAA AGTGGAGAAG GACGGGTCGT TGTTCCACCA GACGCAACAG TTCAGTGAGG AGGGCCAGAC TAAGTGCCTG TCGCTGAAAT TGAATTACGA GGACGTCCTG AGCGCATGGT CGGGACGAGG TCCGCTGTGG ACTGAGGATG GGGGTCAACC CCAAACCGTG CCAATTCTCT CGAATATTGA TATGGCGCTG AACCTGGACC TCGAGAGCTA CCACAGAGAA CAATTAGGCG AGGTCCCCGT GCTCGGGATG GGAGAGGAGG TGTCGGAAGT CGGAGTCGGA CGCGAGGCTC GAGTCATGAG ATATCGAGAA AAGCGCCGCA CTCGACTCTT CTCCAAACAG ATACGATACG AAGTGCGCAA GCTGAACGCC GAGCGCCGCC CACGTATGAA GGGCCGCTTC GTCAAGCGAC TGCCGCCATG A |
Protein |
| >Mp3g19670.1 MTATTEDRSM DPKTATAVMS MAGRAVRACD VCGRDRARWY CAADEAYLCG RCDNSIHCVN ALASRHERVR LNPNGTACKG GERTSSKSFP GLQIRKSSKS LKHHVNPKMR MIKDEMLAQS FFSNPDDTSR VPGYPESLPE DESSRLGLPA YVPDLQASVD DLGGDGSASD GFPMDMPQEL DSLERGDEDC VGGSDDEYLD FTDIVTEADF LDDKGDEGSV FSLDDIKSEH CHDAVKNEGF GQFQPVCNDG FESINVKVEK DGSLFHQTQQ FSEEGQTKCL SLKLNYEDVL SAWSGRGPLW TEDGGQPQTV PILSNIDMAL NLDLESYHRE QLGEVPVLGM GEEVSEVGVG REARVMRYRE KRRTRLFSKQ IRYEVRKLNA ERRPRMKGRF VKRLPP |