Mp3g19940



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00220 serkin_6
Coils Coil Coil
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
FunFam G3DSA:3.30.200.20:FF:000216 Putative serine/threonine-protein kinase dyrk2
ProSiteProfiles PS50011 Protein kinase domain profile.
PANTHER PTHR24058 DUAL SPECIFICITY PROTEIN KINASE
Pfam PF00069 Protein kinase domain
FunFam G3DSA:1.10.510.10:FF:000380 Serine/threonine-protein kinase ppk15
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
CDD cd14133 PKc_DYRK_like
KOG KOG0667 Dual-specificity tyrosine-phosphorylation regulated kinase; N-term missing; [R]
MapolyID Mapoly0049s0040 -
GO GO:0018107 peptidyl-threonine phosphorylation
GO GO:0005524 ATP binding
GO GO:0018105 peptidyl-serine phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0004674 protein serine/threonine kinase activity
GO GO:0004713 protein tyrosine kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0005737 cytoplasm

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Main subject; the single plant-specific DYRKP ortholog in M. polymorpha studied by CRISPR/Cas9 loss-of-function mutants and complementation. Mpdyrkp mutants show shrunken, less-flattened thalli with waved margins, disordered epidermis, lower cell circularity, and defective antheridiophores. Citrine fusion localizes the kinase as diffuse cytosolic puncta around apical notches; cell proliferation remains largely normal.

1 core 1 peripheral

Furuya, T., et al. (2021) · Journal of Plant Research  research experimental subject
Main subject; the single plant-specific DYRKP ortholog in M. polymorpha studied by CRISPR/Cas9 loss-of-function mutants and complementation. Mpdyrkp mutants show shrunken, less-flattened thalli with waved margins, disordered epidermis, lower cell circularity, and defective antheridiophores. Citrine fusion localizes the kinase as diffuse cytosolic puncta around apical notches; cell proliferation remains largely normal.
Shinkawa, H., et al. (2022) · Plant & Cell Physiology  research sequence comparator
DYRK-P subfamily kinase; phylogenetic comparison.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g19940.1 chr3:21817308..21825959 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g19940.2 chr3:21817153..21827836 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g19940.3 chr3:21817308..21827836 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g19940.4 chr3:21817153..21825983 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g19940.5 chr3:21817308..21825959 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g19940 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g19940 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.