Mp3g20050
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SMART | SM00336 | bboxneu5 |
| CDD | cd19821 | Bbox1_BBX-like |
| Pfam | PF00643 | B-box zinc finger |
| PANTHER | PTHR31717 | ZINC FINGER PROTEIN CONSTANS-LIKE 10 |
| KOG | KOG1141 | Predicted histone methyl transferase; N-term missing; [B] |
| MapolyID | Mapoly0049s0030 | - |
| GO | GO:0008270 | zinc ion binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpBBX2 | transcription factor, BBX | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, BBX (from nomenclature)
0 core 1 peripheral
Roetzer J, Asper B, Meir Z, Edelbacher N, Merai Z, Datta S, Dolan L. (2026)
· Current biology : CB research experimental background
B-box gene among the light-induced responsive set.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g20050 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g20050.1 GCTCGATCCG CTCGCTCGCT CAAAAGCCCG TCGGAGAATC TGCCCTCTTG CATTCAGCGC CTCGCTTGTC GAAGGCTCAT TCACTCACTC ACTCCTGCAC CCGAGACGCT CCCCACCCCC GTCTCACGAC ACAAACATCA AACACTTCTC CTGCTCCGCC CTCGCACCCC AAGTCTTCTC TCCTGCAAGA AATCTCCCGC ACCTTTACGC TGCGTCGATC GCCTGCGTGA TCTTCCTCCT TCCTCCTTCC TCCACTTCGA CCGAGCTCAT TGTTTTTCCT GGTGCAATCG GCTTGGCATT GCACAGTGCA CAGGCTGCTG TTGATTGGCA TTTTCCTGGT GGAAGGTCCA CTCGCACAGA CGAATGAGGT TTTCCTTGTC TACCTGCATC AGTAGGGTAG GAGGAATGCG CCTGGGGAAA TTGACAAGTC AGTCATTGGT TTCATAAACA TCAGTCTTGC GCGTCATTCT TATACGACGT CGAGAACTGA GTTTCACGAC ATTTCCTCCA TCAAGATCCC TGGATCGTTG TGCTGCGACA AGAGTGTGGC GTGGGATAAC AATTTACCAG AACGGCGTTG CGAAATCCTG GCTTGAGCTT TTATAGTCGT CGAGGTCGTC ATTTGGACTT GTACACCGGG CTTCGCGGGC TGCATTATAG AGGATCGAAT TGAAGTTATT ACCTGCAAGC AAGGCAGATA GAAGTTGAGA TGGAAAAGAA GTGTGAACTT TGTGGAGATC GGGCAACACT TTATTGCGCT GCAGACGATG CCAACGTGTG CTGGAGCTGC GACGCGAAAG TTCACAGTGC GAATTTCTTG GTTGCACGAC ACGCTCGTTC CGTCTTGTGC GGACGTTGCT GCCAGGAGAC AGACTGCAAG ACATCAGGTC CCCATCCGTC TCCTCTTTCT CGTCTTTGTC CCCGCTGCAA CCCCTCCACG ACGGCAGCAG TCGTGAACGA TTGCAACGGT GACAGTGAGG AAATGGAGAA CAGCGAGACT CTGAGTTATC CGAGCGCTAC CACTGAAGCG GCAGACTCAG GATGCACCTG TGCAAGCCAG GAGAGCCACA CCGGTGAGCA CTTATCCCGT CAAGGCAGAA GGAAGTCAGC CGTAGAGATG GTGGGGCGAG CAAGGGGTTC TCGTAGATTC CACGGTGCCG AAATTAAACG ATTGTGGGGT GTCGAGCGAG GGAAAACTCT TCAAGGAAGA AGGATTCAGA AGAGGAGTAG CTCTCCAGTA AGTGTCATAC CTGTGGACGA GGTGTCTTTG AGGTTGTTGA AGAGGACCTT AAGACCTGAT GTTGTGGAGG AGCAGATAGA CTTGTTGTCT CGGATCTGTG TTGCTGTGTA AGATGTTAGC GCAGTTACGA AGCCGGATCT GTTTTCAAGA CCTTCATTCA TCTGGAGACA GTAGTATTTT TTTATATGTG TAGTCAGGCA CACACACATC TTCATAGTGA TTATAGCTCG TCGGAGAAAC TGGAACGCGA TCGGGAATCT TCACCAGTTC TTGGTCCTCA CTAATTCACT TTGTTTCATC GATACGGTAG TTGTCATACT TGTAAGAGCC AAATGTGAAC TACTGCAGCG AAGACGACGA TGTGGACGAC TTTAGCTGCG CCGCTGACGT CTCTGTTGGT GTTGATGTAC GTGCTCACCC AGACTGGATT GGTAATCCAA ACCCTTCAAC TGGAATCCCG CAGCCAGCGG GCTGATCGAT CTTTCGGGTA CGGATCCGGA GTGGGAAGCA ACTCAGTATC GCCGACGAAG GAGGTTTGTC AAAAACCAGT TTCTTGCGAC CTCACGGAGG AGTCATCTTG CGTTTCGTAT CTTGACGAGG AAGGTTCTTA CAACGAAGAT GCCGTCTGAT GTTCCGGGAG TTCACCTCTG CCATTGAATA TAGACCGACT TGGAGGGAGA TCCTTGTGCG CATCGGAACT CACTGCGGCC CCAAGAAAGT ACCGTACCAG TTCTGAAACG AAGAATGTGA CCGGAGTCTT TTCATCGGTT CTTCTGGTCT ATTCATCGAC TCTAATCGAT TCATGGACAA TCGATTGTCT ACTTACGCAC ATTGGTGCCT TCCATTTGTG GATATCGCCG ACACATCCAC TTCAGCAGCA GCTTGATGAT TGATCGGGGC CAGAAACCCA ATGTGAATAC GAGGAAAGCG TATTTTTGTT CATAATCTTT ACAGTAGTTC CTAGATGTTC CCTTCGGGGT TTACAGCAGC CGCGGCTTTC AGTAGTAGCT CTTTGTTATA CGGCGGGCGA CCCCGCAGAG TAGGTCACAG GCCGGAGGTT TCACCAATGG TCAGCATTGT AGAGACTCAG GACAAGCTTG TTGTGGAGAT AGAGGATGAA TGAGTCATAT TTTTGAAAGC TCTCGACTAT CCAAGATTGT TTAGATTGGT AACTTGCACG GTGTAGTTCT GCGATTGTCA CATTTAATTG GATAGTTACA ACCTACGAGG AGAAGATGAG AAGTCGTGGT ACATAGCGCC AGTTTAGGAC TACATGAACC TAGCAGTACT ATTTGCGATA CTACTTGTAG TTTGGGAGAA TCATGTGCCA AAAGCACATT GCTTTCCCCT TGCATCCTGT CCTTGGTAGA AGGCTTCTTT CAGCAGATCA GCGAAGGAGG TGCCATTCGC AATTTAACGT TCTGTAAATG AGGATATCCA ATCCTGCTGT TGTTCCCAGA TTTTTTTTTC TTTTTCTTAC ACTACACCTT GGGATATTTG GGAATAAAAT CGACCGATGT CTT |
mRNA UTR + CDS |
| >Mp3g20050.1 GCTCGATCCG CTCGCTCGCT CAAAAGCCCG TCGGAGAATC TGCCCTCTTG CATTCAGCGC CTCGCTTGTC GAAGGCTCAT TCACTCACTC ACTCCTGCAC CCGAGACGCT CCCCACCCCC GTCTCACGAC ACAAACATCA AACACTTCTC CTGCTCCGCC CTCGCACCCC AAGTCTTCTC TCCTGCAAGA AATCTCCCGC ACCTTTACGC TGCGTCGATC GCCTGCGTGA TCTTCCTCCT TCCTCCTTCC TCCACTTCGA CCGAGCTCAT TGTTTTTCCT GGTGCAATCG GCTTGGCATT GCACAGTGCA CAGGCTGCTG TTGATTGGCA TTTTCCTGGT GGAAGGTCCA CTCGCACAGA CGAATGAGGT TTTCCTTGTC TACCTGCATC AGTAGGGTAG GAGGAATGCG CCTGGGGAAA TTGACAAGTC AGTCATTGGT TTCATAAACA TCAGTCTTGC GCGTCATTCT TATACGACGT CGAGAACTGA GTTTCACGAC ATTTCCTCCA TCAAGATCCC TGGATCGTTG TGCTGCGACA AGAGTGTGGC GTGGGATAAC AATTTACCAG AACGGCGTTG CGAAATCCTG GCTTGAGCTT TTATAGTCGT CGAGGTCGTC ATTTGGACTT GTACACCGGG CTTCGCGGGC TGCATTATAG AGGATCGAAT TGAAGTTATT ACCTGCAAGC AAGGCAGATA GAAGTTGAGA TGGAAAAGAA GTGTGAACTT TGTGGAGATC GGGCAACACT TTATTGCGCT GCAGACGATG CCAACGTGTG CTGGAGCTGC GACGCGAAAG TTCACAGTGC GAATTTCTTG GTTGCACGAC ACGCTCGTTC CGTCTTGTGC GGACGTTGCT GCCAGGAGAC AGACTGCAAG ACATCAGGTC CCCATCCGTC TCCTCTTTCT CGTCTTTGTC CCCGCTGCAA CCCCTCCACG ACGGCAGCAG TCGTGAACGA TTGCAACGGT GACAGTGAGG AAATGGAGAA CAGCGAGACT CTGAGTTATC CGAGCGCTAC CACTGAAGCG GCAGACTCAG GATGCACCTG TGCAAGCCAG GAGAGCCACA CCGGTGAGCA CTTATCCCGT CAAGGCAGAA GGAAGTCAGC CGTAGAGATG GTGGGGCGAG CAAGGGGTTC TCGTAGATTC CACGGTGCCG AAATTAAACG ATTGTGGGGT GTCGAGCGAG GGAAAACTCT TCAAGGAAGA AGGATTCAGA AGAGGAGTAG CTCTCCAACT GGATTGGTAA TCCAAACCCT TCAACTGGAA TCCCGCAGCC AGCGGGCTGA TCGATCTTTC GGGTACGGAT CCGGAGTGGG AAGCAACTCA GTATCGCCGA CGAAGGAGGT TTGTCAAAAA CCAGTTTCTT GCGACCTCAC GGAGGAGTCA TCTTGCGTTT CGTATCTTGA CGAGGAAGGT TCTTACAACG AAGATGCCGT CTGATGTTCC GGGAGTTCAC CTCTGCCATT GAATATAGAC CGACTTGGAG GGAGATCCTT GTGCGCATCG GAACTCACTG CGGCCCCAAG AAAGTACCGT ACCAGTTCTG AAACGAAGAA TGTGACCGGA GTCTTTTCAT CGGTTCTTCT GGTCTATTCA TCGACTCTAA TCGATTCATG GACAATCGAT TGTCTACTTA CGCACATTGG TGCCTTCCAT TTGTGGATAT CGCCGACACA TCCACTTCAG CAGCAGCTTG ATGATTGATC GGGGCCAGAA ACCCAATGTG AATACGAGGA AAGCGTATTT TTGTTCATAA TCTTTACAGT AGTTCCTAGA TGTTCCCTTC GGGGTTTACA GCAGCCGCGG CTTTCAGTAG TAGCTCTTTG TTATACGGCG GGCGACCCCG CAGAGTAGGT CACAGGCCGG AGGTTTCACC AATGGTCAGC ATTGTAGAGA CTCAGGACAA GCTTGTTGTG GAGATAGAGG ATGAATGAGT CATATTTTTG AAAGCTCTCG ACTATCCAAG ATTGTTTAGA TTGGTAACTT GCACGGTGTA GTTCTGCGAT TGTCACATTT AATTGGATAG TTACAACCTA CGAGGAGAAG ATGAGAAGTC GTGGTACATA GCGCCAGTTT AGGACTACAT GAACCTAGCA GTACTATTTG CGATACTACT TGTAGTTTGG GAGAATCATG TGCCAAAAGC ACATTGCTTT CCCCTTGCAT CCTGTCCTTG GTAGAAGGCT TCTTTCAGCA GATCAGCGAA GGAGGTGCCA TTCGCAATTT AACGTTCTGT AAATGAGGAT ATCCAATCCT GCTGTTGTTC CCAGATTTTT TTTTCTTTTT CTTACACTAC ACCTTGGGAT ATTTGGGAAT AAAATCGACC GATGTCTT |
CDS |
| >Mp3g20050.1 ATGGAAAAGA AGTGTGAACT TTGTGGAGAT CGGGCAACAC TTTATTGCGC TGCAGACGAT GCCAACGTGT GCTGGAGCTG CGACGCGAAA GTTCACAGTG CGAATTTCTT GGTTGCACGA CACGCTCGTT CCGTCTTGTG CGGACGTTGC TGCCAGGAGA CAGACTGCAA GACATCAGGT CCCCATCCGT CTCCTCTTTC TCGTCTTTGT CCCCGCTGCA ACCCCTCCAC GACGGCAGCA GTCGTGAACG ATTGCAACGG TGACAGTGAG GAAATGGAGA ACAGCGAGAC TCTGAGTTAT CCGAGCGCTA CCACTGAAGC GGCAGACTCA GGATGCACCT GTGCAAGCCA GGAGAGCCAC ACCGGTGAGC ACTTATCCCG TCAAGGCAGA AGGAAGTCAG CCGTAGAGAT GGTGGGGCGA GCAAGGGGTT CTCGTAGATT CCACGGTGCC GAAATTAAAC GATTGTGGGG TGTCGAGCGA GGGAAAACTC TTCAAGGAAG AAGGATTCAG AAGAGGAGTA GCTCTCCAAC TGGATTGGTA ATCCAAACCC TTCAACTGGA ATCCCGCAGC CAGCGGGCTG ATCGATCTTT CGGGTACGGA TCCGGAGTGG GAAGCAACTC AGTATCGCCG ACGAAGGAGG TTTGTCAAAA ACCAGTTTCT TGCGACCTCA CGGAGGAGTC ATCTTGCGTT TCGTATCTTG ACGAGGAAGG TTCTTACAAC GAAGATGCCG TCTGA |
Protein |
| >Mp3g20050.1 MEKKCELCGD RATLYCAADD ANVCWSCDAK VHSANFLVAR HARSVLCGRC CQETDCKTSG PHPSPLSRLC PRCNPSTTAA VVNDCNGDSE EMENSETLSY PSATTEAADS GCTCASQESH TGEHLSRQGR RKSAVEMVGR ARGSRRFHGA EIKRLWGVER GKTLQGRRIQ KRSSSPTGLV IQTLQLESRS QRADRSFGYG SGVGSNSVSP TKEVCQKPVS CDLTEESSCV SYLDEEGSYN EDAV |