Mp3g20990



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR12081 TRANSCRIPTION FACTOR E2F
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
SMART SM01372 E2F_TDP_2
Gene3D G3DSA:1.10.10.10 -
FunFam G3DSA:1.10.10.10:FF:000295 E2F transcription factor-like E2FE
Pfam PF02319 E2F/DP family winged-helix DNA-binding domain
FunFam G3DSA:1.10.10.10:FF:000073 E2F transcription factor 8
KEGG K09391 transcription factor E2F7/8
KOG KOG2578 Transcription factor E2F/dimerization partner (TDP)-like proteins; C-term missing; [K]
KOG KOG4483 Uncharacterized conserved protein; C-term missing; [S]
MapolyID Mapoly0159s0029 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005667 transcription regulator complex
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0090575 RNA polymerase II transcription regulator complex
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpDEL1 transcription factor, E2F/DP/DEL Published

Associated Literature (AI-based literature mining, Beta-version)

M. polymorpha E2F/DP-family TF assayed by ampDAP-seq; yielded TFBM (G/C)GCGGG.

1 core 1 peripheral

Zenker S, Wulf D, Meierhenrich A, Viehoever P, Becker S, Eisenhut M, Stracke R, Weisshaar B, Brautigam A. (2025) · Plant Physiology  research experimental subject
M. polymorpha E2F/DP-family TF assayed by ampDAP-seq; yielded TFBM (G/C)GCGGG.
Romani, F., et al. (2026) · The Plant Cell  research experimental comparator
DEL/E2F-like factor; cell-cycle gene inventory.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g20990.1 chr3:23170186..23177129 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g20990 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g20990 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.