Mp3g20990



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR12081 TRANSCRIPTION FACTOR E2F
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
SMART SM01372 E2F_TDP_2
Gene3D G3DSA:1.10.10.10 -
FunFam G3DSA:1.10.10.10:FF:000295 E2F transcription factor-like E2FE
Pfam PF02319 E2F/DP family winged-helix DNA-binding domain
FunFam G3DSA:1.10.10.10:FF:000073 E2F transcription factor 8
KEGG K09391 transcription factor E2F7/8
KOG KOG2578 Transcription factor E2F/dimerization partner (TDP)-like proteins; C-term missing; [K]
KOG KOG4483 Uncharacterized conserved protein; C-term missing; [S]
MapolyID Mapoly0159s0029 -
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0005667 transcription regulator complex
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0090575 RNA polymerase II transcription regulator complex
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpDEL1 transcription factor, E2F/DP/DEL Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g20990.1 chr3:23170186..23177129 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.