Mp3g21190
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF11937 | Protein of unknown function (DUF3455) |
| PANTHER | PTHR35567 | MALATE DEHYDROGENASE (AFU_ORTHOLOGUE AFUA_2G13800) |
| MapolyID | Mapoly0160s0014 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Protein of yet unknown function detected by LC-MS/MS among the abundant cell wall proteins of M. polymorpha thalli (Table 3).
1 core 0 peripheral
Kolkas, H., et al. (2022)
· Frontiers in Plant Science research experimental subject
Protein of yet unknown function detected by LC-MS/MS among the abundant cell wall proteins of M. polymorpha thalli (Table 3).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g21190 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g21190.1 GACACAACAG CCATCTCATT TTACCTCATC TCATCTCATA CATCTCCCTC GAGCCTCGAA GATTGCTCTC TCAGACTGAC TGTCACTCAC TTCTGGAACA GAGATGAAGA ATCCCGGAGC TGCAGCCGTT CTCTTGGTCT GCTTGGCGGT GTTCTCATCG ACACTCTCGC TCGCAGCTGC TGCCAATGAC TTCAATCTGT CTCTGAAGGA CATCGGGCTG CTGGTGAACT TCTCGGTGCC CTGTGATCTG GACTCGCGCA TCGCCGTGCC CGATCGGGGC GGCCTGCTGA CGCCCAACCT GCTGGCCATC GGCCACCAGG AGTACAAGTA TGACGGCTCC AAGTGGGTGT TCAACGCGCA GTCAGCCAAC CTGTTCAACA AGACTCTCGC CAAAGTCGGA ACTCTGGCCG GTGCCAAGGA CGGCTCCGTC ACCTTCAGCC TCTTCGCCAA CCAGAAAGGA GTCGGAACCA CCGATGCCGC CTCCGTCACC GCCAAGCCCA TCCAGTCCGT GCTCCAGCGC TTCGCCATTC CTCTCCAGCT TCTCAACGTC ACCAGCACCA TGAAGGGCTC GTGAGTACAC TCCATCTTTC GATTCCAGCT GAATTGCCAA TTGCTGAACA ACCTTCTAAT TCACTTCTAT CAATTAATCG ATCAATCAAA CTCGAGAGAA GTTGCAATTC GTGCAGAGGA TTTCACTGAT CAGCAAACTT CTCACAGTAG CTCGTTCAGC TCGAATGCTT TCCTACTGGC CAGCAGGTGT ATTGAATGTC GCTCCAGTTG GCAGTGCATG GAGAATTCTG GAGTCCGAGT CCGGCTATCA GCAAGACTCT GATTTCTCCC TGAATTTTTT GCTGCTCACT GTCGTGACCA CTGACCAAAT GGACAATGGA TGGAATGTGC GCAGGAACTA CGCCTCGTCG GACTACATTC AGAGGTTCGG AACACAGACG GGCTTGGCTC CAGGATCGAC CTACCCCGCC AAGTTGAACG ACATTTTCCG CTCCAGATTC ACAGCGTTCT ACGCCTTCTA CCTGCCCATT GATCTGTCGC CTCAGCTCGC CACTCGAGTG CCCAGATGCG GTGACGAGCG CTTCTACGGC CTTCAATACG GCAGGGACTT CTAGATCAGA GCAGATCAGA TGCTACAGCG TGCCCGAGCT CTGATTTCCT CCACCGGCCG CACCTTTGGA TAAGACCTGG GTCGGCGAAG GGAATCAATC AGCCAGCCCT CGACATTTCT CCTCCCATTT TGCTAAATTC GGCCGACGCT CGGGGCGATT CCATCGTTCA GGTCTGGCGA TGCACTGCAC TTCTACTACA ACTTCAGCTC CTTCTTCTTC TTCTTCGTGG GAGCTGACAA TCGCACGAGT GGAATGCATC CCTAAGCAGC GACATCGCTC GAGCGAATTT ACTACTATCC ATTATTTTTA ATACTGAATC TAAACATTAA AATCTCGTGT GAATTTGGCG GCAAGTTTGC TCTTCGAGAG TGACAGGACG ACACAGCGTC CGACTACGTC GACTGAAAGC GAGGTTGCGC TTATGGTCTA CGTAGTTTGT GGATGCGGTT AGATGACATA GTTAGCACTG AAGCGTAGCC CAAGTTACTC GCTTGGTTTG GTTTCATCCA TGTACGGCTT GGTGCCCACT TTTAATCTTT TTGTTTTCAC TTATCCAGCG TCCAGACGCC ACGTCCCTGC TTTGCGCATA TGGATATGGA TGCTGTGCCG GAGACTGTGA AATCCATTGA CATTGATATA AAATATATGG TTTGAAGTTC GTGTT |
mRNA UTR + CDS |
| >Mp3g21190.1 GACACAACAG CCATCTCATT TTACCTCATC TCATCTCATA CATCTCCCTC GAGCCTCGAA GATTGCTCTC TCAGACTGAC TGTCACTCAC TTCTGGAACA GAGATGAAGA ATCCCGGAGC TGCAGCCGTT CTCTTGGTCT GCTTGGCGGT GTTCTCATCG ACACTCTCGC TCGCAGCTGC TGCCAATGAC TTCAATCTGT CTCTGAAGGA CATCGGGCTG CTGGTGAACT TCTCGGTGCC CTGTGATCTG GACTCGCGCA TCGCCGTGCC CGATCGGGGC GGCCTGCTGA CGCCCAACCT GCTGGCCATC GGCCACCAGG AGTACAAGTA TGACGGCTCC AAGTGGGTGT TCAACGCGCA GTCAGCCAAC CTGTTCAACA AGACTCTCGC CAAAGTCGGA ACTCTGGCCG GTGCCAAGGA CGGCTCCGTC ACCTTCAGCC TCTTCGCCAA CCAGAAAGGA GTCGGAACCA CCGATGCCGC CTCCGTCACC GCCAAGCCCA TCCAGTCCGT GCTCCAGCGC TTCGCCATTC CTCTCCAGCT TCTCAACGTC ACCAGCACCA TGAAGGGCTC GAACTACGCC TCGTCGGACT ACATTCAGAG GTTCGGAACA CAGACGGGCT TGGCTCCAGG ATCGACCTAC CCCGCCAAGT TGAACGACAT TTTCCGCTCC AGATTCACAG CGTTCTACGC CTTCTACCTG CCCATTGATC TGTCGCCTCA GCTCGCCACT CGAGTGCCCA GATGCGGTGA CGAGCGCTTC TACGGCCTTC AATACGGCAG GGACTTCTAG ATCAGAGCAG ATCAGATGCT ACAGCGTGCC CGAGCTCTGA TTTCCTCCAC CGGCCGCACC TTTGGATAAG ACCTGGGTCG GCGAAGGGAA TCAATCAGCC AGCCCTCGAC ATTTCTCCTC CCATTTTGCT AAATTCGGCC GACGCTCGGG GCGATTCCAT CGTTCAGGTC TGGCGATGCA CTGCACTTCT ACTACAACTT CAGCTCCTTC TTCTTCTTCT TCGTGGGAGC TGACAATCGC ACGAGTGGAA TGCATCCCTA AGCAGCGACA TCGCTCGAGC GAATTTACTA CTATCCATTA TTTTTAATAC TGAATCTAAA CATTAAAATC TCGTGTGAAT TTGGCGGCAA GTTTGCTCTT CGAGAGTGAC AGGACGACAC AGCGTCCGAC TACGTCGACT GAAAGCGAGG TTGCGCTTAT GGTCTACGTA GTTTGTGGAT GCGGTTAGAT GACATAGTTA GCACTGAAGC GTAGCCCAAG TTACTCGCTT GGTTTGGTTT CATCCATGTA CGGCTTGGTG CCCACTTTTA ATCTTTTTGT TTTCACTTAT CCAGCGTCCA GACGCCACGT CCCTGCTTTG CGCATATGGA TATGGATGCT GTGCCGGAGA CTGTGAAATC CATTGACATT GATATAAAAT ATATGGTTTG AAGTTCGTGT T |
CDS |
| >Mp3g21190.1 ATGAAGAATC CCGGAGCTGC AGCCGTTCTC TTGGTCTGCT TGGCGGTGTT CTCATCGACA CTCTCGCTCG CAGCTGCTGC CAATGACTTC AATCTGTCTC TGAAGGACAT CGGGCTGCTG GTGAACTTCT CGGTGCCCTG TGATCTGGAC TCGCGCATCG CCGTGCCCGA TCGGGGCGGC CTGCTGACGC CCAACCTGCT GGCCATCGGC CACCAGGAGT ACAAGTATGA CGGCTCCAAG TGGGTGTTCA ACGCGCAGTC AGCCAACCTG TTCAACAAGA CTCTCGCCAA AGTCGGAACT CTGGCCGGTG CCAAGGACGG CTCCGTCACC TTCAGCCTCT TCGCCAACCA GAAAGGAGTC GGAACCACCG ATGCCGCCTC CGTCACCGCC AAGCCCATCC AGTCCGTGCT CCAGCGCTTC GCCATTCCTC TCCAGCTTCT CAACGTCACC AGCACCATGA AGGGCTCGAA CTACGCCTCG TCGGACTACA TTCAGAGGTT CGGAACACAG ACGGGCTTGG CTCCAGGATC GACCTACCCC GCCAAGTTGA ACGACATTTT CCGCTCCAGA TTCACAGCGT TCTACGCCTT CTACCTGCCC ATTGATCTGT CGCCTCAGCT CGCCACTCGA GTGCCCAGAT GCGGTGACGA GCGCTTCTAC GGCCTTCAAT ACGGCAGGGA CTTCTAG |
Protein |
| >Mp3g21190.1 MKNPGAAAVL LVCLAVFSST LSLAAAANDF NLSLKDIGLL VNFSVPCDLD SRIAVPDRGG LLTPNLLAIG HQEYKYDGSK WVFNAQSANL FNKTLAKVGT LAGAKDGSVT FSLFANQKGV GTTDAASVTA KPIQSVLQRF AIPLQLLNVT STMKGSNYAS SDYIQRFGTQ TGLAPGSTYP AKLNDIFRSR FTAFYAFYLP IDLSPQLATR VPRCGDERFY GLQYGRDF |