Mp3g21740



Description

Annotation

Database ID Description
SUPERFAMILY SSF48113 Heme-dependent peroxidases
ProSiteProfiles PS50292 Animal heme peroxidase superfamily profile.
PANTHER PTHR11903 PROSTAGLANDIN G/H SYNTHASE
Pfam PF03098 Animal haem peroxidase
Gene3D G3DSA:1.10.640.10 Haem peroxidase domain superfamily, animal type
KEGG K10529 fatty acid alpha-dioxygenase [EC:1.13.11.92]
KOG KOG2408 Peroxidase/oxygenase; N-term missing; [R]
MapolyID Mapoly0089s0042 -
GO GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO GO:0004601 peroxidase activity
GO GO:0020037 heme binding
GO GO:0006979 response to oxidative stress

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Peroxidase/oxygenase; listed in Table 1 among MpKAN-responsive DEGs.

0 core 1 peripheral

Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
Peroxidase/oxygenase; listed in Table 1 among MpKAN-responsive DEGs.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g21740.1 chr3:24245970..24251703 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g21740 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g21740 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.