Mp3g21840



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
PANTHER PTHR12956 ALKALINE CERAMIDASE-RELATED
Pfam PF04765 TOD1/MUCI70, glycosyltransferase-like domain
KOG KOG0587 Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases; N-term missing; C-term missing; [T]
MapolyID Mapoly0089s0032 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

M. polymorpha RGGAT ortholog identified and cloned into the study's cDNA library.

1 core 0 peripheral

Kang HS, Tong X, Mariette A, Leong M, Beahan C, Flores-Sandoval E, Pedersen GB, Rautengarten C, Bowman JL, Ebert B, Bacic A, Doblin MS, Persson S, Lampugnani ER. (2025) · The Plant journal : for cell and molecular biology  research experimental subject
M. polymorpha RGGAT ortholog identified and cloned into the study's cDNA library.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g21840.1 chr3:24396168..24403607 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g21840 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g21840 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.