Mp3g22390
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF06376 | Arabinogalactan peptide |
| PANTHER | PTHR33374 | ARABINOGALACTAN PROTEIN 20 |
| MapolyID | Mapoly0024s0017 | - |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Listed among the 17 putative peptide-encoding genes retrieved by this study's screen of the top 1,000 antheridia-expressed genes (annotated as arabinogalactan peptide; 77 aa; signal peptide predicted; FPKM 136.58/154.867 in the two antheridia replicates). Not characterized further - MpRALF1 (Mp7g07270) was the candidate pursued.
0 core 1 peripheral
Zhang, Y., et al. (2026)
· Nature Plants research experimental background
Listed among the 17 putative peptide-encoding genes retrieved by this study's screen of the top 1,000 antheridia-expressed genes (annotated as arabinogalactan peptide; 77 aa; signal peptide predicted; FPKM 136.58/154.867 in the two antheridia replicates). Not characterized further - MpRALF1 (Mp7g07270) was the candidate pursued.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g22390 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g22390.1 CTCTTTCTAT CCGCTGACAG GCGCATTTCC AGACGGAGCT GCGGGAACCC ATTGTCGCGT CTGCTCAGGC CAGTGCGTGG TGCTAAGTTG CGACATCGTC CCGCAGTTGG AACTTACATC ATTCGTCTGC AGCCCCGCTC GCCTATCACT CGCGATCTCC CGTTCCTTGC CTGGCCTCGA GTTCTCTTGT GGGGGCGCGA TCCGGCCATC ATCACTATCA TCAGCATCAT CAGCGCCCTT CCTTCCTCCT GTGACCCGTC CCCTCGCCTC GCCTCCCCCT GCTGGCCTTT GAGGGTCGAT CAGTTCGACC CACTCATTTC TCGGGCGTTG CACGGGACGA GCGTCGGGCG TCGGGCGTCT ATGCTCTTCC TCGCACTACA GCCTCGGCCG AGCTCTCTGC ACGGGCTGGC AAAGGCGTGA TCCGACGCTG GTTTCCTCCG TGTGTCCGGC ATTCGGAGCG TCGGGCTCGT TGCGCTCCGA GGAGAGACGA TGGCTCGCGT CTGGGGATCG TTCGAGTCGA CGATTATGGT GCTGATTCTG GCGTTCTTCG CGGGGGCCCT CGTCCCGGCT GTGAATGCCC AAGCGCCAGC TCCGGGTCCT GCTCCTGGCC CGAGTTCCGA CAGTCACGCT ATCGACCAGG GCATCGCTTA CGTCCTGATG TTTCTGGCGT TGGTCTTGAC TTACCTCATT CATCCTCTGG ATGCGTTTCC CAGCTTCTTT TGAGGCTCAT TGTCGAGGAA TGCCGCGATT CGACGAGGAC TTGCGATTGT ATTTTTTCTC TGCAGAAGGA GTGGGGAGTA CTCAGGGGAG TGATGCCAGC AACGGTTGTT GAGAGAAATC TTGTGTGTGC TACTTCTAGC GGAGCGCAAG AGGAGGAGTG TGACGAGCTT TACTGAACCG CATGCTGTAC GATACACAGC GGCTGTGGAC CTCTGTACCC GAATTTTTTG TTCTTTGACG CACGTGCATT GTAAACTTTC TTTATTCTCT ATCAGTTTTC AGACTTCTGA GAGAAGCGAG GCTGTTCGAA GTTTAAATCC TTTGTACCTC CAATCGGAAT ATCTGAGGCC CAGGTCCGCC TGAATTTTGT TTTGATCTGC ATACCGTAGG TCGGTACAGA TGTTTCTCAG CCGTGTAATG CGGGCAAGAA CCCTATTTGA CGCAAGGAAT ACTGAAATTG AAAGGTGCTG GCTTTTTTCC ACCT |
mRNA UTR + CDS |
| >Mp3g22390.1 CTCTTTCTAT CCGCTGACAG GCGCATTTCC AGACGGAGCT GCGGGAACCC ATTGTCGCGT CTGCTCAGGC CAGTGCGTGG TGCTAAGTTG CGACATCGTC CCGCAGTTGG AACTTACATC ATTCGTCTGC AGCCCCGCTC GCCTATCACT CGCGATCTCC CGTTCCTTGC CTGGCCTCGA GTTCTCTTGT GGGGGCGCGA TCCGGCCATC ATCACTATCA TCAGCATCAT CAGCGCCCTT CCTTCCTCCT GTGACCCGTC CCCTCGCCTC GCCTCCCCCT GCTGGCCTTT GAGGGTCGAT CAGTTCGACC CACTCATTTC TCGGGCGTTG CACGGGACGA GCGTCGGGCG TCGGGCGTCT ATGCTCTTCC TCGCACTACA GCCTCGGCCG AGCTCTCTGC ACGGGCTGGC AAAGGCGTGA TCCGACGCTG GTTTCCTCCG TGTGTCCGGC ATTCGGAGCG TCGGGCTCGT TGCGCTCCGA GGAGAGACGA TGGCTCGCGT CTGGGGATCG TTCGAGTCGA CGATTATGGT GCTGATTCTG GCGTTCTTCG CGGGGGCCCT CGTCCCGGCT GTGAATGCCC AAGCGCCAGC TCCGGGTCCT GCTCCTGGCC CGAGTTCCGA CAGTCACGCT ATCGACCAGG GCATCGCTTA CGTCCTGATG TTTCTGGCGT TGGTCTTGAC TTACCTCATT CATCCTCTGG ATGCGTTTCC CAGCTTCTTT TGAGGCTCAT TGTCGAGGAA TGCCGCGATT CGACGAGGAC TTGCGATTGT ATTTTTTCTC TGCAGAAGGA GTGGGGAGTA CTCAGGGGAG TGATGCCAGC AACGGTTGTT GAGAGAAATC TTGTGTGTGC TACTTCTAGC GGAGCGCAAG AGGAGGAGTG TGACGAGCTT TACTGAACCG CATGCTGTAC GATACACAGC GGCTGTGGAC CTCTGTACCC GAATTTTTTG TTCTTTGACG CACGTGCATT GTAAACTTTC TTTATTCTCT ATCAGTTTTC AGACTTCTGA GAGAAGCGAG GCTGTTCGAA GTTTAAATCC TTTGTACCTC CAATCGGAAT ATCTGAGGCC CAGGTCCGCC TGAATTTTGT TTTGATCTGC ATACCGTAGG TCGGTACAGA TGTTTCTCAG CCGTGTAATG CGGGCAAGAA CCCTATTTGA CGCAAGGAAT ACTGAAATTG AAAGGTGCTG GCTTTTTTCC ACCT |
CDS |
| >Mp3g22390.1 ATGGCTCGCG TCTGGGGATC GTTCGAGTCG ACGATTATGG TGCTGATTCT GGCGTTCTTC GCGGGGGCCC TCGTCCCGGC TGTGAATGCC CAAGCGCCAG CTCCGGGTCC TGCTCCTGGC CCGAGTTCCG ACAGTCACGC TATCGACCAG GGCATCGCTT ACGTCCTGAT GTTTCTGGCG TTGGTCTTGA CTTACCTCAT TCATCCTCTG GATGCGTTTC CCAGCTTCTT TTGA |
Protein |
| >Mp3g22390.1 MARVWGSFES TIMVLILAFF AGALVPAVNA QAPAPGPAPG PSSDSHAIDQ GIAYVLMFLA LVLTYLIHPL DAFPSFF |