Mp3g23170



Description

Annotation

Database ID Description
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS50090 Myb-like domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd00167 SANT
PANTHER PTHR47994 F14D16.11-RELATED
FunFam G3DSA:1.10.10.60:FF:000204 transcription factor MYB80
FunFam G3DSA:1.10.10.60:FF:000001 MYB-related transcription factor
Pfam PF00249 Myb-like DNA-binding domain
SMART SM00717 sant
KEGG K09422 transcription factor MYB, plant
KOG KOG0048 Transcription factor, Myb superfamily; C-term missing; [K]
MapolyID Mapoly0024s0094 -

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB8 transcription factor, MYB Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, MYB (from nomenclature)

0 core 1 peripheral

Csicsely, E., et al. (2025) · The Plant Journal  research experimental background
R2R3-MYB8 (Mp3g23170); miRNA-anticorrelated target.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g23170.1 chr3:26157812..26163043 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g23170 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g23170 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.