Mp3g25200
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. |
| Coils | Coil | Coil |
| Gene3D | G3DSA:4.10.280.10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain |
| CDD | cd11452 | bHLH_AtNAI1_like |
| PANTHER | PTHR45959 | BHLH TRANSCRIPTION FACTOR |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain |
| SMART | SM00353 | finulus |
| KOG | KOG1319 | bHLHZip transcription factor BIGMAX; C-term missing; [K] |
| MapolyID | Mapoly0100s0033 | - |
| GO | GO:0046983 | protein dimerization activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpBHLH41 | transcription factor, bHLH | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g25200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g25200.1 AAAACAGGAC GACGTGGTGG TGCTGCAGCA GGATCCGGCC CCTCCGCACT CCGCTGCGGC CTACCACCAT CACTGTGGAC GCGCAGCGCA GGGGGCCGGG GCTCGGCCTA CATTACGCTT TTGCGCATCC ATCCGTCTAG GCATTTGCTC TCTCTCCCCG ACTCTCACTC GCGCTCTTCT CCGCGCTCGC TCTCGTCGCC ACCACCACCG CCTCTCCTCT GCACCCCCTC AGTTTCTTCT CCTCTGCTCT ATCTCCCTCG TGTTCCACCT CCGGTGGACT GCCAATTCGC CACTGGCCTC GTCTGTGTCA ATCGAGGAAG AATAGAGCAG AAGGAGAAAG AGAGTGAGAC GGTTGATTGG ATTTGGTCTG GATGGTCTGT GGACTGCGGG GTTCTCGCCT CTGAGGCGCT ACGGACTTGA GATGCGGTCA CGCTCGTGGA TACTAGGTGT GTGCTCAACT CCCAACTCCC GCACTTCATC GCACTGCACT GCACTGCTCT GCACTTCGCT CCGGTTATTT ATGCGTGCAC GGGAGGCTCC GTCGTAGGGA CAAGGATAGG CTATGGTAGC GCAGCGAGCG AGGACGTGCT GGCTTTGGTT GGGTCGGTCT GGTTTGGCTT GGCTTGTTCA GTTCTCGACC CTCGGGCTCA GCGTTTAGTT CACAGTATCA CCTGATTAAG ACCTCACGCA CGAAAGGGCC CAACTGCTCT GCAGCCGAGC GCTTCGGCAT CAGTTCACGA TTCGACCCCC GTGTGCAATT CATTTTCAGG CAGCGTTCCA TTGCGTCAGC TACGGCTCGA GGGAACAGCG ACGGTTTAGT ACTGTGACGA GATGAGCGTG CACTGTGGGA GCAATTGCAT CCCAGACCAC CGGTTCACGA GATGTGGACT TCTTCTCACA CACCCAACTG CCACTTAAGA CACAAGCTGT AGAACGTACT TTGCGCCTGC CTGGCCTCAG CTTACCTGGT GGTTGTGTCG AGCACCACCT GCATCTTTCA GCCCATGGGG AACTCAACCG ATCTGAGAAT GTGTGTTATC GTCACGTCAC GAAAGATGTC GGTCAGTCTG CCGAAATGCG AGTATGGCCG AGTAGTATTC GTCAGCGCAG AGCTGGAGAA TGATGCACTC TTCTTCCGTG CTGCAGTGCT CCCCCCACCC TGTAAATTGC TCTCCATTTC TCCTGACGGG CTCTTGGGAG GCCCGTCGCT GCCCCCTGCT TGCCCACGCC GATTGCAGTC GAGCCGTATC CCTCGTCCGC CCCGAGGCAT TGACGCCCCC GGCTCTCCGC CCATGGCTCC GGGTCTCGGA ATGCCTTTTG GAAACTCCTA CTTTTCCGGG CCGATATCGA CGCGTCTGTA ATTACTCTCG CTTGACTACC GGAGGGCTGG GGTTCAGAAG CCCTGGGGTC CATTTGTCGT CTTGCATTGC TGCCGAGTAC GGCTCGAGTC AGGCCCCGTC GTGGCATGCG GATGCGGATG CGGTTTCTAA ACTGTGGCTT GGCACTGCAG GTCCCCCTCT GTAGCACTCA AAGGTCGAGC ATTTCGTCAG TCTTACGGTA TAATATGGAA GTGGTATCAA CCCCGGCAGG AAACGGCGCA AAACAGTGGC TATCTGAACT GGTACGTGCT CCTCCTCATG CTGAATGGGG CTGGAATGTG AGAGAGAGAG AGATGATAGG AGGCTTCGAT TGCAGTGCAG CTGGGGCCAG TGACTGACGC TCGTGTTGCG ATGCAGGGCT TGGAGGAACC ATCGCTAGTT AGGCATTTGG ACAGTCTTTT CCTCCCGACA TCGAACCAAT ATCAATCCGT CAAGGGCTAC AACAATCTGA ATTCTTACGA CCTCGGCGGG TCCTTCTTGA ACGTGAAGCA GAGAGACGCT TCGCCCGTCA CCATGAACAA CACCTTCACC TCCACGGGGT ACTCGTCCCA GTGGGACGCC CTGCTCAACA ACGAACGCCC GGCCAAAATG CCCAAAACGA TCTCATGGGA TGGCTCTTTC TCGAACCAGG GCATGGGCAA TTCCCTCACG CACCAGCCCC TGCTGCCGCT GATCTTCAGT CACAAACAGC AGCAGCAGCA CCACGAACCC CAAATCCAGC ATCAGCAGCA GCACCACCAG CACCAGCACA ACCACATGAA CCAGTTCTTC TCCCCCCAGC AGCAGCTCTG CCAAGGCATT GACGGCTTCG TGGCCTCGCT TCCCAAGCTC TCAGATGATT TGCACGACTC CGTAGCCCCG CGAACCCCGA CCATGGAAAT CGGGGGCTCC CAGGTTCTAG GCGGAGGAGC ACAGGACACT TGCAACAGCG ACGTGCACTC CGTCGAGGCT ATGAGCATGA GCTCCACTTG CAACCGCGAC TCGTCACCGA TTGCCGACTC GTTCAGGGGC AAGAGGAAGC CGGAGTTTTT CCCCTCTCCC ACCGACATGA GGGTTCAGAG GCCTCCTCCC ATGGCCACCA CCCGAGCTCC CTCTCCCCCG AGCAAGGCTA CCGGCCACAC CCAGGACCAT ATTATGGCCG AACGCAAGCG TCGCGAGAAG CTCAGCCAGC GGTTCATCGC CTTGTCCGCC ATTGTTCCCG GTCTGAAGAA GGTACTTACT TCATTCCATG GCTTGCAATA GTTCTATGTG GTGGTGCCCA TAGGCCGCTT GTTTGCGAGA TGGATTCCAT CTCGTTGACA GTTTGCGAAG CTCGAATTGT TGTGGGAGTA GGGTTCTACT TTACTCGAGG CTTGACGCTC GAAGCCCTGC TTGCTGCAGA TGGACAAGGC ATCCGTTCTC GGAGATGCCA TCAAGTACGT GAAGTCGCTG CAAGATCGAG TGCAGAAACT CGAGGAGCAG GCCCCGAAGA AGAATGTGAG CTCGATTGCC GTGGTCAAGA ACGGCAAGGA CAGCAAGGGG TCTGGATCCG ACGGCGAGAC GGGAGCTGAG TCCGAGGTGG TGGAAAGCGG AGAGACTCCG GACATCGAGG CCAGAGTCAA CGACAAGAAC GTGCTCATCA AAATGCACTG CGAAATGAAG ATTGGCAGCG TTGCCAAGTG CATCTCCGAG CTGGAGAAGC TGCACTTGAT CGTCTTGAAC GCCAATATCC TGTCTTTCAC CAACACATCC GTGGATCTCA CTCTGTCTGC TCAGGTTAGG CCTCCTCTAC TGTTCTCTCA GTCTTTCGTT GCCTTATCTG ATATTATATT GTTCTCGGGA ATGTCTATCT CCTAAGCATT GTGCTCTAAC TGTGTGTTTC TATCGTGACT TACAGACGGA GGACGGTCAC GAAGTCACTG CCGATGAGAT TGTGGCTGCC CTGCAGAGTT TTTTCAAGAC GTTGTAACAA GGAACCTCGT GCGAGAGTTC ATCCGACAGC GACAAAATAT CGATGATGAT GATACGAAAC CAAACGAAAC ATTTTTGGAG TCGCTCGAGC GTTGACATGC ATCGCTCGGG AGGGCGGCAC CATTTTCAGT CACTTGTATA TGTACAGACA TAAGGAGGAT ATGTGTATCT AGCTAGCTAG TTAGCTGCTG CTGCTGCAGA AGGTTTGTGC ACTGCTGCTG CGCGCGCGCG CTCACATCAA AGTCGTGAAA GTTACCCGTT ACCGCCATCG CCGGGAGGGG ACTCGCCGTC GGCCGGCCAT GTCGCCTGCT TGCACCTGTT ACCAGGTTTT TGCCAATCTC TATTTGGCGT CCTGCAAGCT CGGGGCATCC GTCCATCGAC GCGTCTCGTC TAGTATTACC CTTTCTCTTC CCCACTCGTT TTTTTGAAGA GGGCTGGTGT CTAGCACAGC CTCTTTTCTC AGCCAGTGTG GTGGATTGTG GTTCTTTTTA GCTCTCGTGT CTGTCAGAAG CTTGGTCCTT CCAAATCCTT TAGTGTCGGG ACAAATTTCA CATCATCTGC TCGTAGTTGA GGTTAGGCTC GAGTCATTGG TGGTCACCAG GCTTTTTTTG CGGAGCCAAA GTTGCTCTGT TCCAGCCCCA TGGGGACTTA TCCAGCTCCT GCTGCCTGAG CTCTAAGCAG GTTTTTCCGG GTTGCATGAC CCTTGTTTTC GCCGATACTT TTATTTTTAA AGGCGTTCTT AGAATTGGAA GCGACCCATA TCGAGGTGTC ACACAAGAGA GCTAGAACAT TGAATCCTTT GTTTAGTAGA AGGATGTTTT ACCCTTTGAT GGTCTGTAGT ACTTCGCATC CTAATTAAAC GTATTCACAT ATGTTTCTGA ATAATTTTAC ACTTTCTCCA CTTGTACGA |
mRNA UTR + CDS |
| >Mp3g25200.1 AAAACAGGAC GACGTGGTGG TGCTGCAGCA GGATCCGGCC CCTCCGCACT CCGCTGCGGC CTACCACCAT CACTGTGGAC GCGCAGCGCA GGGGGCCGGG GCTCGGCCTA CATTACGCTT TTGCGCATCC ATCCGTCTAG GCATTTGCTC TCTCTCCCCG ACTCTCACTC GCGCTCTTCT CCGCGCTCGC TCTCGTCGCC ACCACCACCG CCTCTCCTCT GCACCCCCTC AGTTTCTTCT CCTCTGCTCT ATCTCCCTCG TGTTCCACCT CCGGTGGACT GCCAATTCGC CACTGGCCTC GTCTGTGTCA ATCGAGGAAG AATAGAGCAG AAGGAGAAAG AGAGTGAGAC GGTTGATTGG ATTTGGTCTG GATGGTCTGT GGACTGCGGG GTTCTCGCCT CTGAGGCGCT ACGGACTTGA GATGCGGTCA CGCTCGTGGA TACTAGGTCC CCCTCTGTAG CACTCAAAGG TCGAGCATTT CGTCAGTCTT ACGGTATAAT ATGGAAGTGG TATCAACCCC GGCAGGAAAC GGCGCAAAAC AGTGGCTATC TGAACTGGGC TTGGAGGAAC CATCGCTAGT TAGGCATTTG GACAGTCTTT TCCTCCCGAC ATCGAACCAA TATCAATCCG TCAAGGGCTA CAACAATCTG AATTCTTACG ACCTCGGCGG GTCCTTCTTG AACGTGAAGC AGAGAGACGC TTCGCCCGTC ACCATGAACA ACACCTTCAC CTCCACGGGG TACTCGTCCC AGTGGGACGC CCTGCTCAAC AACGAACGCC CGGCCAAAAT GCCCAAAACG ATCTCATGGG ATGGCTCTTT CTCGAACCAG GGCATGGGCA ATTCCCTCAC GCACCAGCCC CTGCTGCCGC TGATCTTCAG TCACAAACAG CAGCAGCAGC ACCACGAACC CCAAATCCAG CATCAGCAGC AGCACCACCA GCACCAGCAC AACCACATGA ACCAGTTCTT CTCCCCCCAG CAGCAGCTCT GCCAAGGCAT TGACGGCTTC GTGGCCTCGC TTCCCAAGCT CTCAGATGAT TTGCACGACT CCGTAGCCCC GCGAACCCCG ACCATGGAAA TCGGGGGCTC CCAGGTTCTA GGCGGAGGAG CACAGGACAC TTGCAACAGC GACGTGCACT CCGTCGAGGC TATGAGCATG AGCTCCACTT GCAACCGCGA CTCGTCACCG ATTGCCGACT CGTTCAGGGG CAAGAGGAAG CCGGAGTTTT TCCCCTCTCC CACCGACATG AGGGTTCAGA GGCCTCCTCC CATGGCCACC ACCCGAGCTC CCTCTCCCCC GAGCAAGGCT ACCGGCCACA CCCAGGACCA TATTATGGCC GAACGCAAGC GTCGCGAGAA GCTCAGCCAG CGGTTCATCG CCTTGTCCGC CATTGTTCCC GGTCTGAAGA AGATGGACAA GGCATCCGTT CTCGGAGATG CCATCAAGTA CGTGAAGTCG CTGCAAGATC GAGTGCAGAA ACTCGAGGAG CAGGCCCCGA AGAAGAATGT GAGCTCGATT GCCGTGGTCA AGAACGGCAA GGACAGCAAG GGGTCTGGAT CCGACGGCGA GACGGGAGCT GAGTCCGAGG TGGTGGAAAG CGGAGAGACT CCGGACATCG AGGCCAGAGT CAACGACAAG AACGTGCTCA TCAAAATGCA CTGCGAAATG AAGATTGGCA GCGTTGCCAA GTGCATCTCC GAGCTGGAGA AGCTGCACTT GATCGTCTTG AACGCCAATA TCCTGTCTTT CACCAACACA TCCGTGGATC TCACTCTGTC TGCTCAGACG GAGGACGGTC ACGAAGTCAC TGCCGATGAG ATTGTGGCTG CCCTGCAGAG TTTTTTCAAG ACGTTGTAAC AAGGAACCTC GTGCGAGAGT TCATCCGACA GCGACAAAAT ATCGATGATG ATGATACGAA ACCAAACGAA ACATTTTTGG AGTCGCTCGA GCGTTGACAT GCATCGCTCG GGAGGGCGGC ACCATTTTCA GTCACTTGTA TATGTACAGA CATAAGGAGG ATATGTGTAT CTAGCTAGCT AGTTAGCTGC TGCTGCTGCA GAAGGTTTGT GCACTGCTGC TGCGCGCGCG CGCTCACATC AAAGTCGTGA AAGTTACCCG TTACCGCCAT CGCCGGGAGG GGACTCGCCG TCGGCCGGCC ATGTCGCCTG CTTGCACCTG TTACCAGGTT TTTGCCAATC TCTATTTGGC GTCCTGCAAG CTCGGGGCAT CCGTCCATCG ACGCGTCTCG TCTAGTATTA CCCTTTCTCT TCCCCACTCG TTTTTTTGAA GAGGGCTGGT GTCTAGCACA GCCTCTTTTC TCAGCCAGTG TGGTGGATTG TGGTTCTTTT TAGCTCTCGT GTCTGTCAGA AGCTTGGTCC TTCCAAATCC TTTAGTGTCG GGACAAATTT CACATCATCT GCTCGTAGTT GAGGTTAGGC TCGAGTCATT GGTGGTCACC AGGCTTTTTT TGCGGAGCCA AAGTTGCTCT GTTCCAGCCC CATGGGGACT TATCCAGCTC CTGCTGCCTG AGCTCTAAGC AGGTTTTTCC GGGTTGCATG ACCCTTGTTT TCGCCGATAC TTTTATTTTT AAAGGCGTTC TTAGAATTGG AAGCGACCCA TATCGAGGTG TCACACAAGA GAGCTAGAAC ATTGAATCCT TTGTTTAGTA GAAGGATGTT TTACCCTTTG ATGGTCTGTA GTACTTCGCA TCCTAATTAA ACGTATTCAC ATATGTTTCT GAATAATTTT ACACTTTCTC CACTTGTACG A |
CDS |
| >Mp3g25200.1 ATGGAAGTGG TATCAACCCC GGCAGGAAAC GGCGCAAAAC AGTGGCTATC TGAACTGGGC TTGGAGGAAC CATCGCTAGT TAGGCATTTG GACAGTCTTT TCCTCCCGAC ATCGAACCAA TATCAATCCG TCAAGGGCTA CAACAATCTG AATTCTTACG ACCTCGGCGG GTCCTTCTTG AACGTGAAGC AGAGAGACGC TTCGCCCGTC ACCATGAACA ACACCTTCAC CTCCACGGGG TACTCGTCCC AGTGGGACGC CCTGCTCAAC AACGAACGCC CGGCCAAAAT GCCCAAAACG ATCTCATGGG ATGGCTCTTT CTCGAACCAG GGCATGGGCA ATTCCCTCAC GCACCAGCCC CTGCTGCCGC TGATCTTCAG TCACAAACAG CAGCAGCAGC ACCACGAACC CCAAATCCAG CATCAGCAGC AGCACCACCA GCACCAGCAC AACCACATGA ACCAGTTCTT CTCCCCCCAG CAGCAGCTCT GCCAAGGCAT TGACGGCTTC GTGGCCTCGC TTCCCAAGCT CTCAGATGAT TTGCACGACT CCGTAGCCCC GCGAACCCCG ACCATGGAAA TCGGGGGCTC CCAGGTTCTA GGCGGAGGAG CACAGGACAC TTGCAACAGC GACGTGCACT CCGTCGAGGC TATGAGCATG AGCTCCACTT GCAACCGCGA CTCGTCACCG ATTGCCGACT CGTTCAGGGG CAAGAGGAAG CCGGAGTTTT TCCCCTCTCC CACCGACATG AGGGTTCAGA GGCCTCCTCC CATGGCCACC ACCCGAGCTC CCTCTCCCCC GAGCAAGGCT ACCGGCCACA CCCAGGACCA TATTATGGCC GAACGCAAGC GTCGCGAGAA GCTCAGCCAG CGGTTCATCG CCTTGTCCGC CATTGTTCCC GGTCTGAAGA AGATGGACAA GGCATCCGTT CTCGGAGATG CCATCAAGTA CGTGAAGTCG CTGCAAGATC GAGTGCAGAA ACTCGAGGAG CAGGCCCCGA AGAAGAATGT GAGCTCGATT GCCGTGGTCA AGAACGGCAA GGACAGCAAG GGGTCTGGAT CCGACGGCGA GACGGGAGCT GAGTCCGAGG TGGTGGAAAG CGGAGAGACT CCGGACATCG AGGCCAGAGT CAACGACAAG AACGTGCTCA TCAAAATGCA CTGCGAAATG AAGATTGGCA GCGTTGCCAA GTGCATCTCC GAGCTGGAGA AGCTGCACTT GATCGTCTTG AACGCCAATA TCCTGTCTTT CACCAACACA TCCGTGGATC TCACTCTGTC TGCTCAGACG GAGGACGGTC ACGAAGTCAC TGCCGATGAG ATTGTGGCTG CCCTGCAGAG TTTTTTCAAG ACGTTGTAA |
Protein |
| >Mp3g25200.1 MEVVSTPAGN GAKQWLSELG LEEPSLVRHL DSLFLPTSNQ YQSVKGYNNL NSYDLGGSFL NVKQRDASPV TMNNTFTSTG YSSQWDALLN NERPAKMPKT ISWDGSFSNQ GMGNSLTHQP LLPLIFSHKQ QQQHHEPQIQ HQQQHHQHQH NHMNQFFSPQ QQLCQGIDGF VASLPKLSDD LHDSVAPRTP TMEIGGSQVL GGGAQDTCNS DVHSVEAMSM SSTCNRDSSP IADSFRGKRK PEFFPSPTDM RVQRPPPMAT TRAPSPPSKA TGHTQDHIMA ERKRREKLSQ RFIALSAIVP GLKKMDKASV LGDAIKYVKS LQDRVQKLEE QAPKKNVSSI AVVKNGKDSK GSGSDGETGA ESEVVESGET PDIEARVNDK NVLIKMHCEM KIGSVAKCIS ELEKLHLIVL NANILSFTNT SVDLTLSAQT EDGHEVTADE IVAALQSFFK TL |