Mp4g03600



Description

Annotation

Database ID Description
PANTHER PTHR14255 CEREBLON
Pfam PF01925 Sulfite exporter TauE/SafE
MapolyID Mapoly0044s0113 -
GO GO:0031464 Cul4A-RING E3 ubiquitin ligase complex
GO GO:0016020 membrane
GO GO:0016567 protein ubiquitination

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Sulphite exporter (TauE/SafE); listed in Table 1 as a candidate MpKAN-regulated DEG.

0 core 1 peripheral

Briginshaw, L. N., et al. (2022) · New Phytologist  research experimental background
Sulphite exporter (TauE/SafE); listed in Table 1 as a candidate MpKAN-regulated DEG.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g03600.1 chr4:4890834..4894489 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g03600 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g03600 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.