Mp4g06490



Description

Annotation

Database ID Description
ProSiteProfiles PS50076 dnaJ domain profile.
PANTHER PTHR43999 DNAJ HOMOLOG SUBFAMILY C MEMBER 2
SUPERFAMILY SSF46565 Chaperone J-domain
Gene3D G3DSA:1.10.10.60 -
ProSitePatterns PS00636 Nt-dnaJ domain signature.
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00167 SANT
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
Pfam PF00226 DnaJ domain
CDD cd06257 DnaJ
ProSiteProfiles PS50090 Myb-like domain profile.
FunFam G3DSA:1.10.10.60:FF:000416 Myb family transcription factor
Gene3D G3DSA:1.10.287.110 DnaJ domain
SMART SM00717 sant
ProSiteProfiles PS51293 SANT domain profile.
PRINTS PR00625 DnaJ domain signature
Pfam PF00249 Myb-like DNA-binding domain
SMART SM00271 dnaj_3
KEGG K09522 DnaJ homolog subfamily C member 2
KOG KOG0724 Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; [O]
MapolyID Mapoly0114s0007 -
GO GO:0030544 Hsp70 protein binding
GO GO:0006450 regulation of translational fidelity
GO GO:0043022 ribosome binding
GO GO:0051083 'de novo' cotranslational protein folding
GO GO:0005829 cytosol

Nomenclature

Gene symbol Product Transcript ID Status
MpRR-MYB4 transcription factor, MYB Published

Transcript models

Transcript ID Location Sequences Extract region
Mp4g06490.1 chr4:8496595..8501032 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g06490.2 chr4:8496595..8501487 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g06490 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g06490 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.