Mp4g11760



Description

Annotation

Database ID Description
FunFam G3DSA:3.40.1810.10:FF:000003 MADS-box transcription factor MADS-MC
CDD cd00265 MADS_MEF2_like
ProSitePatterns PS00350 MADS-box domain signature.
Gene3D G3DSA:3.40.1810.10 -
ProSiteProfiles PS50066 MADS-box domain profile.
ProSiteProfiles PS51297 K-box domain profile.
SMART SM00432 madsneu2
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF55455 SRF-like
Pfam PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain)
Pfam PF01486 K-box region
PRINTS PR00404 MADS domain signature
Coils Coil Coil
PANTHER PTHR48019 SERUM RESPONSE FACTOR HOMOLOG
KEGG K09264 MADS-box transcription factor, plant
KOG KOG0014 MADS box transcription factor; [K]
MapolyID Mapoly0011s0161 -
GO GO:0005634 nucleus
GO GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity
GO GO:0003677 DNA binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0045944 positive regulation of transcription by RNA polymerase II

Nomenclature

Gene symbol Product Transcript ID Status
MpMADS2 transcription factor, MIKC-type MADS-box protein 2 Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, MIKC-type MADS-box protein 2; Genome paper MADS2: Mapoly0011s0161.1 (from nomenclature)

0 core 3 peripheral

Zenker S, Wulf D, Meierhenrich A, Viehoever P, Becker S, Eisenhut M, Stracke R, Weisshaar B, Brautigam A. (2025) · Plant Physiology  research citation comparator
Cited as a comparator: the Marchantia MADS-box TF MpMADS2 binds the conserved CArG box, illustrating deep conservation of MADS binding specificity.
Lin, P. C., et al. (2016) · Plant and Cell Physiology  research experimental comparator
MADS-box gene (LW14289) identified as a target of Mpo-miR11681.1; cleavage supported by degradome evidence.
Melissa DÁ, Luis LJ, Eduardo FS, Annie EC, Domingo MÁ, Tom FJ, Jesús LR, Fernando OM, John BL, Mario AA, Cruz-Ramírez A. (2025) · Physiologia plantarum  research sequence background
MIKCc-type MADS-box gene proposed as a putative MpANT target via APB-binding-site/co-expression inference.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g11760.1 chr4:14774611..14779870 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g11760 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g11760 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.