Mp4g12350



Description

Annotation

Database ID Description
Gene3D G3DSA:2.70.150.10 -
FunFam G3DSA:2.70.150.10:FF:000004 Plasma membrane ATPase
SUPERFAMILY SSF56784 HAD-like
FunFam G3DSA:3.40.50.1000:FF:000211 Plasma membrane ATPase
Pfam PF00702 haloacid dehalogenase-like hydrolase
SFLD SFLDF00027 p-type atpase
SUPERFAMILY SSF81653 Calcium ATPase, transduction domain A
ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site.
PANTHER PTHR42861 CALCIUM-TRANSPORTING ATPASE
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00122 E1-E2 ATPase
Gene3D G3DSA:3.40.50.1000 -
CDD cd02076 P-type_ATPase_H
SUPERFAMILY SSF81665 Calcium ATPase, transmembrane domain M
SFLD SFLDG00002 C1.7: P-type atpase like
Gene3D G3DSA:1.20.1110.10 -
PRINTS PR00120 H+-transporting ATPase (proton pump) signature
FunFam G3DSA:3.40.1110.10:FF:000005 Plasma membrane ATPase
Coils Coil Coil
Gene3D G3DSA:6.10.140.890 -
Gene3D G3DSA:3.40.1110.10 -
PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
NCBIfam TIGR01494 HAD-IC family P-type ATPase
SMART SM00831 Cation_ATPase_N_a_2
NCBIfam TIGR01647 plasma-membrane proton-efflux P-type ATPase
Pfam PF00690 Cation transporter/ATPase, N-terminus
KEGG K01535 H+-transporting ATPase [EC:7.1.2.1]
KOG KOG0205 Plasma membrane H+-transporting ATPase; [P]
MapolyID Mapoly0011s0217 -
GO GO:0008553 P-type proton-exporting transporter activity
GO GO:0051453 regulation of intracellular pH
GO GO:1902600 proton transmembrane transport
GO GO:0005524 ATP binding
GO GO:0000166 nucleotide binding
GO GO:0120029 proton export across plasma membrane
GO GO:0005215 transporter activity
GO GO:0016887 ATP hydrolysis activity
GO GO:0005886 plasma membrane
GO GO:0016021 membrane
GO GO:0015662 P-type ion transporter activity
GO GO:0034220 monoatomic ion transmembrane transport
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpHA6 Plasma membrane H+-ATPase Published

Associated Literature (AI-based literature mining, Beta-version)

Plasma membrane H+-ATPase; Genome paper MpHA1: Mapoly0019s0140.1 MpHA2: Mapoly0089s0056.1 MpHA3: Mapoly0080s0002.1 MpHA4: Mapoly0050s0045.1 MpHA5: Mapoly0050s0042.1 MpHA6: Mapoly0011s0217.1 MpHA7: Mapoly0100s0016.1 MpHA8: Mapoly0125s0027.1 (from nomenclature)

1 core 0 peripheral

Okumura, M., et al. (2012) · Plant Physiology  research experimental subject
One of eight M. polymorpha plasma-membrane H+-ATPase isoforms (MpHA1-8) characterized in this study (sequence analysis + RT-PCR expression).

Transcript models

Transcript ID Location Sequences Extract region
Mp4g12350.1 chr4:15527162..15538320 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g12350.2 chr4:15527162..15538320 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g12350 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g12350 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.