Mp4g12420



Description

Annotation

Database ID Description
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd11453 bHLH_AtBIM_like
SMART SM00353 finulus
Gene3D G3DSA:4.10.280.10 -
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
PANTHER PTHR46412 BES1-INTERACTING MYC-LIKE PROTEIN
Pfam PF00010 Helix-loop-helix DNA-binding domain
KOG KOG2588 Predicted DNA-binding protein; N-term missing; C-term missing; [K]
KOG KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230; N-term missing; [K]
MapolyID Mapoly0174s0004 -
GO GO:0006351 DNA-templated transcription
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH44 transcription factor, bHLH Published

Associated Literature (AI-based literature mining, Beta-version)

M. polymorpha bHLH TF tested by ampDAP-seq; yielded the canonical E-box TFBM CACGTG.

1 core 1 peripheral

Zenker S, Wulf D, Meierhenrich A, Viehoever P, Becker S, Eisenhut M, Stracke R, Weisshaar B, Brautigam A. (2025) · Plant Physiology  research experimental subject
M. polymorpha bHLH TF tested by ampDAP-seq; yielded the canonical E-box TFBM CACGTG.
Melissa DÁ, Luis LJ, Eduardo FS, Annie EC, Domingo MÁ, Tom FJ, Jesús LR, Fernando OM, John BL, Mario AA, Cruz-Ramírez A. (2025) · Physiologia plantarum  research citation background
Co-expressed with MpANT in antheridia/archegonia regions.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g12420.1 chr4:15861266..15867874 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g12420 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g12420 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.