Mp4g13880
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF19239 | GIY-YIG domain-containing protein |
| PANTHER | PTHR35133 | PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| MapolyID | Mapoly0070s0093 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0003677 | DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpHRT-like | transcription factor, HRT-like | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g13880 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g13880.1 GGCGCTTTCT GCAGGGCGAG CTGGCTGGCG ATGGAGGAGG AGGAGGAGGA GTTGAGCTCG GGGCACCGCG TCGACTGCCT TTTGCTCTCG ATCCCGATCC CGCATCGTGA TGCTACCCTA CGCACAATTG GAGAGCGGCG CTTTCTTGGA AAGAATGCAA GAAGAGCTGT GGAGATGAGA GTGCGGAGTA GTGCGTGCGA TGGAAGCGAG TGATGTAATG TGCGGGCGAT GGATTCTGGT TCATAGGTTT TCCTAGTGCG CGCGATGGAT ACCCCGCTTC TGCGCAGGAT TGCTCGTCGA GGGCAGGGGT ATATGACGGT GAGGGAACAC GGGACTTCGA AGTTCAGGCA GTGCGCGAGA AGCACTCGGG CCGAGGTTTG TCTCTCTGAG TCGAGCACGG GTGATGGTCG GAACTCCACG TTCTCTTTCA CCCTGCGCTA GGACATCGGA CAACTGAGGC CGGGGAGACT CGGACGATCA GAGAAACTGC GATTTCTGCA GGTCGATTTC GGGGTGGAAT TCGGCTTAGC CCCATCCGCG CCCCCAGACG CAGCACGCAC AGAGAAGCGC ACGGATTTGC TCGAAGCTGG CCTCCTTTCC TGACACTCCG CTCTGCCTCC GGGATTTTCA CAGAGATTTG ACCTGGTAAC ATCGGACGAG TGGCATGGGA CCTCCCAGCG TAGGTTTCAC CACGCGGAAG GTGGCAGCAG CACAATTTCA AAAGGCAGAA AAAGAAAGAT TGAAACGAGA AGATTGCCAC CGTGTAAAGC ACGACAAACT CTTCTCGGAT TGGAAAATTC TAGTTGGGTC GACGGATTGG AGGACTCACG CCGCCGAGGA AGAGGGGTCT CAGAGGTATC GGCTCCACAA TCTACCTGCG ACTTACTTCG GGCCCGGAGT GTATGAGCTG GGTTTGACAT TGCAGAATCT GTCAGCTCCT CGAGAAGCAA AGCCTCGCAA ACTCCGAAAG CAAGATGTAG TCGTGGTTTA CCTGGGCCAA GCCGAGAATG TTCGTCAGAG ACTTCAAAAA TATGGCCAAT CTGGATCTCA CTTGGAAGGT GCTCGACTGG TTCCTGGTGC AGCCGTGGAG CACTGTGAAT ACGATGATGG GATGACTTCT CCTTCTCCGG CAAAGGCGAG AGCCAAAGCC GATGGGAGCA CGGGGGGCAG CACCGAACGA GGACTGCGCT TGTTCACAGA AGTGTTTTCC AGAGGGTACT CCATCGTGTT CAGATGGGCG AGAACAGAGA GCAAGCAGAT GGCAGAAAAA GTAGAGTCGG AGCTTCTCCA CGTGTTTGAC TATCCCTGGA ATCGAGGATT GAATGGGGCT CGGAGACCCG ACGATATTCT AGCGAGGTTG GAGCTCATGC AGTACCACTT GGAGCAAAGT CTGTGCTTGG GAAGGTTTTT AGGCGCAGGA AGGGAGAAGT GGACGGTCTT TCATAGGAAA GTTGGCATCA AAGTACCCGT GGAAAGGCCA TCAGAAGAAG GCAGCGCAGG TAGCTCCAGG TTTTCCATTT TCCGTGCCAG CTCGAAGGAT GGACTGCCCA ATGCTTTACC CAACTCCGCA GACTCTCATT GCGGTGTTCT GATGGCGGAT GGGTCCAAGT GCTCCAAGCC TCCAGTGAAA GGGCGCAGAC GGTGCTCTGA GCATAAAGGC CTGAGAGCGA AGTTGACGAC ACGACGCGCA CGAACTGCGA AATCCAAGAC CGGTGATTGT GGCAGGAATC CAAGCATTCC CTCCGAGTCT TATGGTGGCC ACAAAGGTGA GCCTCCGGTG CTGGTGGTGA AATCCACACC GAACGGCAAG CGGTTGGAGC TCAGTGAAGC TCCCAGCGAC GGTTTGGTTT GTGGTGTGAC CTTAGACGGC GGCAGCGTAT GCCTGAATGA GCCTATCAAA GACAGGAAGC GTTGTGCTGC TCACAAAGGA ATGCGAACTG GGGGAAAGGC CACTGGTAGT CCCATAAGCA TCCATCTTAG CACGCATACT CCAGCCAGAA AGACCAACCA TGTAGTGAGA TAGTCCGAAA AAACAGCACA CTTGGAAAAT TGCGCGTCGC AGGATGTCGA TTTTTTTCCC AAAGATTTCA TCTTTATATG ATAACACTCT GTATATAATT TGTCTTCACT AAATCGTCAA GCAAAAATCC TCACGGAGCC |
mRNA UTR + CDS |
| >Mp4g13880.1 GGCGCTTTCT GCAGGGCGAG CTGGCTGGCG ATGGAGGAGG AGGAGGAGGA GTTGAGCTCG GGGCACCGCG TCGACTGCCT TTTGCTCTCG ATCCCGATCC CGCATCGTGA TGCTACCCTA CGCACAATTG GAGAGCGGCG CTTTCTTGGA AAGAATGCAA GAAGAGCTGT GGAGATGAGA GTGCGGAGTA GTGCGTGCGA TGGAAGCGAG TGATGTAATG TGCGGGCGAT GGATTCTGGT TCATAGGTTT TCCTAGTGCG CGCGATGGAT ACCCCGCTTC TGCGCAGGAT TGCTCGTCGA GGGCAGGGGT ATATGACGGT GAGGGAACAC GGGACTTCGA AGTTCAGGCA GTGCGCGAGA AGCACTCGGG CCGAGGTTTG TCTCTCTGAG TCGAGCACGG GTGATGGTCG GAACTCCACG TTCTCTTTCA CCCTGCGCTA GGACATCGGA CAACTGAGGC CGGGGAGACT CGGACGATCA GAGAAACTGC GATTTCTGCA GGTCGATTTC GGGGTGGAAT TCGGCTTAGC CCCATCCGCG CCCCCAGACG CAGCACGCAC AGAGAAGCGC ACGGATTTGC TCGAAGCTGG CCTCCTTTCC TGACACTCCG CTCTGCCTCC GGGATTTTCA CAGAGATTTG ACCTGGTAAC ATCGGACGAG TGGCATGGGA CCTCCCAGCG TAGGTTTCAC CACGCGGAAG GTGGCAGCAG CACAATTTCA AAAGGCAGAA AAAGAAAGAT TGAAACGAGA AGATTGCCAC CGTGTAAAGC ACGACAAACT CTTCTCGGAT TGGAAAATTC TAGTTGGGTC GACGGATTGG AGGACTCACG CCGCCGAGGA AGAGGGGTCT CAGAGGTATC GGCTCCACAA TCTACCTGCG ACTTACTTCG GGCCCGGAGT GTATGAGCTG GGTTTGACAT TGCAGAATCT GTCAGCTCCT CGAGAAGCAA AGCCTCGCAA ACTCCGAAAG CAAGATGTAG TCGTGGTTTA CCTGGGCCAA GCCGAGAATG TTCGTCAGAG ACTTCAAAAA TATGGCCAAT CTGGATCTCA CTTGGAAGGT GCTCGACTGG TTCCTGGTGC AGCCGTGGAG CACTGTGAAT ACGATGATGG GATGACTTCT CCTTCTCCGG CAAAGGCGAG AGCCAAAGCC GATGGGAGCA CGGGGGGCAG CACCGAACGA GGACTGCGCT TGTTCACAGA AGTGTTTTCC AGAGGGTACT CCATCGTGTT CAGATGGGCG AGAACAGAGA GCAAGCAGAT GGCAGAAAAA GTAGAGTCGG AGCTTCTCCA CGTGTTTGAC TATCCCTGGA ATCGAGGATT GAATGGGGCT CGGAGACCCG ACGATATTCT AGCGAGGTTG GAGCTCATGC AGTACCACTT GGAGCAAAGT CTGTGCTTGG GAAGGTTTTT AGGCGCAGGA AGGGAGAAGT GGACGGTCTT TCATAGGAAA GTTGGCATCA AAGTACCCGT GGAAAGGCCA TCAGAAGAAG GCAGCGCAGG TAGCTCCAGG TTTTCCATTT TCCGTGCCAG CTCGAAGGAT GGACTGCCCA ATGCTTTACC CAACTCCGCA GACTCTCATT GCGGTGTTCT GATGGCGGAT GGGTCCAAGT GCTCCAAGCC TCCAGTGAAA GGGCGCAGAC GGTGCTCTGA GCATAAAGGC CTGAGAGCGA AGTTGACGAC ACGACGCGCA CGAACTGCGA AATCCAAGAC CGGTGATTGT GGCAGGAATC CAAGCATTCC CTCCGAGTCT TATGGTGGCC ACAAAGGTGA GCCTCCGGTG CTGGTGGTGA AATCCACACC GAACGGCAAG CGGTTGGAGC TCAGTGAAGC TCCCAGCGAC GGTTTGGTTT GTGGTGTGAC CTTAGACGGC GGCAGCGTAT GCCTGAATGA GCCTATCAAA GACAGGAAGC GTTGTGCTGC TCACAAAGGA ATGCGAACTG GGGGAAAGGC CACTGGTAGT CCCATAAGCA TCCATCTTAG CACGCATACT CCAGCCAGAA AGACCAACCA TGTAGTGAGA TAGTCCGAAA AAACAGCACA CTTGGAAAAT TGCGCGTCGC AGGATGTCGA TTTTTTTCCC AAAGATTTCA TCTTTATATG ATAACACTCT GTATATAATT TGTCTTCACT AAATCGTCAA GCAAAAATCC TCACGGAGCC |
CDS |
| >Mp4g13880.1 ATGGGACCTC CCAGCGTAGG TTTCACCACG CGGAAGGTGG CAGCAGCACA ATTTCAAAAG GCAGAAAAAG AAAGATTGAA ACGAGAAGAT TGCCACCGTG TAAAGCACGA CAAACTCTTC TCGGATTGGA AAATTCTAGT TGGGTCGACG GATTGGAGGA CTCACGCCGC CGAGGAAGAG GGGTCTCAGA GGTATCGGCT CCACAATCTA CCTGCGACTT ACTTCGGGCC CGGAGTGTAT GAGCTGGGTT TGACATTGCA GAATCTGTCA GCTCCTCGAG AAGCAAAGCC TCGCAAACTC CGAAAGCAAG ATGTAGTCGT GGTTTACCTG GGCCAAGCCG AGAATGTTCG TCAGAGACTT CAAAAATATG GCCAATCTGG ATCTCACTTG GAAGGTGCTC GACTGGTTCC TGGTGCAGCC GTGGAGCACT GTGAATACGA TGATGGGATG ACTTCTCCTT CTCCGGCAAA GGCGAGAGCC AAAGCCGATG GGAGCACGGG GGGCAGCACC GAACGAGGAC TGCGCTTGTT CACAGAAGTG TTTTCCAGAG GGTACTCCAT CGTGTTCAGA TGGGCGAGAA CAGAGAGCAA GCAGATGGCA GAAAAAGTAG AGTCGGAGCT TCTCCACGTG TTTGACTATC CCTGGAATCG AGGATTGAAT GGGGCTCGGA GACCCGACGA TATTCTAGCG AGGTTGGAGC TCATGCAGTA CCACTTGGAG CAAAGTCTGT GCTTGGGAAG GTTTTTAGGC GCAGGAAGGG AGAAGTGGAC GGTCTTTCAT AGGAAAGTTG GCATCAAAGT ACCCGTGGAA AGGCCATCAG AAGAAGGCAG CGCAGGTAGC TCCAGGTTTT CCATTTTCCG TGCCAGCTCG AAGGATGGAC TGCCCAATGC TTTACCCAAC TCCGCAGACT CTCATTGCGG TGTTCTGATG GCGGATGGGT CCAAGTGCTC CAAGCCTCCA GTGAAAGGGC GCAGACGGTG CTCTGAGCAT AAAGGCCTGA GAGCGAAGTT GACGACACGA CGCGCACGAA CTGCGAAATC CAAGACCGGT GATTGTGGCA GGAATCCAAG CATTCCCTCC GAGTCTTATG GTGGCCACAA AGGTGAGCCT CCGGTGCTGG TGGTGAAATC CACACCGAAC GGCAAGCGGT TGGAGCTCAG TGAAGCTCCC AGCGACGGTT TGGTTTGTGG TGTGACCTTA GACGGCGGCA GCGTATGCCT GAATGAGCCT ATCAAAGACA GGAAGCGTTG TGCTGCTCAC AAAGGAATGC GAACTGGGGG AAAGGCCACT GGTAGTCCCA TAAGCATCCA TCTTAGCACG CATACTCCAG CCAGAAAGAC CAACCATGTA GTGAGATAG |
Protein |
| >Mp4g13880.1 MGPPSVGFTT RKVAAAQFQK AEKERLKRED CHRVKHDKLF SDWKILVGST DWRTHAAEEE GSQRYRLHNL PATYFGPGVY ELGLTLQNLS APREAKPRKL RKQDVVVVYL GQAENVRQRL QKYGQSGSHL EGARLVPGAA VEHCEYDDGM TSPSPAKARA KADGSTGGST ERGLRLFTEV FSRGYSIVFR WARTESKQMA EKVESELLHV FDYPWNRGLN GARRPDDILA RLELMQYHLE QSLCLGRFLG AGREKWTVFH RKVGIKVPVE RPSEEGSAGS SRFSIFRASS KDGLPNALPN SADSHCGVLM ADGSKCSKPP VKGRRRCSEH KGLRAKLTTR RARTAKSKTG DCGRNPSIPS ESYGGHKGEP PVLVVKSTPN GKRLELSEAP SDGLVCGVTL DGGSVCLNEP IKDRKRCAAH KGMRTGGKAT GSPISIHLST HTPARKTNHV VR |