Mp4g14630
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF03018 | Dirigent-like protein |
| Gene3D | G3DSA:2.40.480.10 | - |
| PANTHER | PTHR21495 | NUCLEOPORIN-RELATED |
| SUPERFAMILY | SSF141493 | Allene oxide cyclase-like |
| MapolyID | Mapoly0070s0018 | - |
| GO | GO:0009695 | jasmonic acid biosynthetic process |
| GO | GO:0046423 | allene-oxide cyclase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpDIR23 | Secondary metabolism enzyme | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Secondary metabolism enzyme (from nomenclature)
0 core 1 peripheral
Kobayashi, H., et al. (2023)
· Frontiers in Plant Science research sequence background
Locus ID for MpSGF16A, listed in the candidate peptide gene table.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g14630 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g14630.1 CAGCTTTCAA TGACACTCCA ACCCGCATGG ATGTTGAATC GGTCTAACCT TTGCAGAAGG TGCTGTGCAG AAGGATCTCT CACCGTTTCT GCTACGGATC CTAATGCTCG AAGTTAAGTT TTTCTCTTCT CGTTGTGGTT TGGGTGGAAC AACTTGCCTC ATATACTTCG GAACCTGAAT CCAGACCACC ACATCGCCCA AGTTTGCCGG ATTGGTTTTC CTCTGTTTCC CGACCAAAGT GCAAGGTTCG TTGTTTCAAT GTTCACTGCT CAATCATCAG TTTTTGTCCT TAGTACATTC TTTCCTACGG GGAGGAGCCT TCTGAGTCTC CTAATTTCCA AATTTAAGAA AGAGTCTGTT TTACAGCTAA GTTTATCTTG TCCCAGCTGC TCGAATGGAC CTCGTTCAAG GTTTTGACCA TCATACTTCG TGAAGCAACT AAGCTCCTAC AAGCATTCCA TCCTCTGAAC TGCCGTGCTC GGCAGCAACC GTATCTCATC TGCTCGAATG AACATTGTCC AGATCAAAGT GCTTCACGCG GTCCTTTCAT TCTAATGTCA AAGGGCACTC GTCACCAGGT TTATATTACT AAGATCGACC CAATCGACAG AAGAGATCAC AATCTACACG GGATTATAGT GACATGAGAA TTATGGAAAA TACCGAGCTT CAGGTTCATT GACGTCGGCA GAAGCCACTT ACTGCAAAAT CTGTGTTCTG TCAGTAAGCC CATTTATCTG GGTCTGAAAC CTTGTTATTC CAGTATCGTC GGTCACACTG TATGCTTCCA TTGCCTCACC TGTTTCTGCT GCTGCCAATG GCATCTTAAC CTGAAAATCG GATTGCTTCG CTACTGTTGG GGCCTTTCGC TGATCATGTT GCCAGAGTGT GTGTTCCTAA TCTCCTAAAC TGCTCAGCTA CGAATAGTGC CCCGCATCTT TGTTCCTTCC AACGATCGTA TCCGTGGTCG TGACGTCATA TGAAAGGATT TGCAATGTTT TGATGCAAGA GGAATCTTCG ATTGATGATA TAGCTAACCG GGCTAAAGAA AGATCAAAAA TATGGACAAG CTGTCAGGAT TCGGGTGTCC ATAATGGCAG AAGTGCAACT GGAACTGGCA CATGGAGGGA CCTCGAAGGA CTCAAAGATT CTCAGCAGGA GACAGATCCA CCTCCGAGAG CTTCAAAGAG GTGAGGCCGA GACCTTTACC AGTTCATCGG ACAAACGATC CTCCCAGGAC ATCGGTCCAT CTCTTCAAGA CTCCGGGGAG CTTCACCGGA TCCTTAAATC GACGCTCTCC CTCTCTCTGC AGCTCGATGA CTCTTATCAA ACACCCCACG AGTTAGAAAT CAGAGGATAG AATAAAGTCA ATCGTCGGAT TAAAAATTCA ACAGGATCGT CGCAGGCTAG GTGTGCAGAA ATGGGCGAAG AGCGAGAAAG AGCATTGCTA ATGAAGATGG CAGCAATGTT GTCGTTGCTG CTGTCAGTCG TCGTTGCCGA TGCCTACTAT TCGGAGAGTG ACGAGGCCGA GACGCTGACA TACTTCGTCC ACTGCACGGA CGAGGTGGCG ATTGTGGCAG GCCCGGGGAA GGACACGCGC GACATGAACA AACTGGCATT CGGGAGCACT CTCATCTACG ACAACGATGT CACCGAAGGA CCAGAACTGA CCTCCAGGCA CATCGGCAGG CGGCAAGGCA TGGCGGTCAT GGACAACTTC GCAGGCCAGA ACTACTACCT CCTCTTCACG GTCATCTTCG AGCAGCACGA CAAGTACCAG GGCACTCTGC AGGTCCAGGG GACGGAGATC GGCCATGGAC CCCGCGAGAT TTCCATCGTC GGGGGCACGG GTGATTTCCG AGGCGCCAGA GGCTACTCCA CATTCTACCT GCACACCGCC ATTCCCTACC CCATTATCAA GCAGAGCTTC CACATCTACA AGAGCTCCTT CAACTACAAG CCCTCGATGA TGCAGGCATC TGAATGAGCC GACTGGCTAC AAACGCACAC GGTGGAACTC TTCGGATCGG TGGATCTGAG AACACTGTAA TCGACACGAG GTCGCTCTTG ATCGTAGATA GTAAATGCGC CCGCTTCTTC GGTCTTGCAA GTTCTGTATC GGTGTTCGAA GATAGAGCGG GAGGAGATCC TAGTCAGGGC AGCACATTTT TACGCTTCTC TACGAGATTG CTTCTTTATT CTTCAAAAAA GAAATAAATT TGGCACATGC TCTTCTTCGG GCGTCTGTTG ATGGGAGTCA ATGATGAGTT TTCGTATTTC AAATGCCACC ATGCACCTTG CATACCTCTA GCGATGTGCT TGATTTTGTG GTTTTCTATG GTACCATAAC AAGATAAAGA ATAC |
mRNA UTR + CDS |
| >Mp4g14630.1 CAGCTTTCAA TGACACTCCA ACCCGCATGG ATGTTGAATC GGTCTAACCT TTGCAGAAGG TGCTGTGCAG AAGGATCTCT CACCGTTTCT GCTACGGATC CTAATGCTCG AAGTTAAGTT TTTCTCTTCT CGTTGTGGTT TGGGTGGAAC AACTTGCCTC ATATACTTCG GAACCTGAAT CCAGACCACC ACATCGCCCA AGTTTGCCGG ATTGGTTTTC CTCTGTTTCC CGACCAAAGT GCAAGGTTCG TTGTTTCAAT GTTCACTGCT CAATCATCAG TTTTTGTCCT TAGTACATTC TTTCCTACGG GGAGGAGCCT TCTGAGTCTC CTAATTTCCA AATTTAAGAA AGAGTCTGTT TTACAGCTAA GTTTATCTTG TCCCAGCTGC TCGAATGGAC CTCGTTCAAG GTTTTGACCA TCATACTTCG TGAAGCAACT AAGCTCCTAC AAGCATTCCA TCCTCTGAAC TGCCGTGCTC GGCAGCAACC GTATCTCATC TGCTCGAATG AACATTGTCC AGATCAAAGT GCTTCACGCG GTCCTTTCAT TCTAATGTCA AAGGGCACTC GTCACCAGGT TTATATTACT AAGATCGACC CAATCGACAG AAGAGATCAC AATCTACACG GGATTATAGT GACATGAGAA TTATGGAAAA TACCGAGCTT CAGGTTCATT GACGTCGGCA GAAGCCACTT ACTGCAAAAT CTGTGTTCTG TCAGTAAGCC CATTTATCTG GGTCTGAAAC CTTGTTATTC CAGTATCGTC GGTCACACTG TATGCTTCCA TTGCCTCACC TGTTTCTGCT GCTGCCAATG GCATCTTAAC CTGAAAATCG GATTGCTTCG CTACTGTTGG GGCCTTTCGC TGATCATGTT GCCAGAGTGT GTGTTCCTAA TCTCCTAAAC TGCTCAGCTA CGAATAGTGC CCCGCATCTT TGTTCCTTCC AACGATCGTA TCCGTGGTCG TGACGTCATA TGAAAGGATT TGCAATGTTT TGATGCAAGA GGAATCTTCG ATTGATGATA TAGCTAACCG GGCTAAAGAA AGATCAAAAA TATGGACAAG CTGTCAGGAT TCGGGTGTCC ATAATGGCAG AAGTGCAACT GGAACTGGCA CATGGAGGGA CCTCGAAGGA CTCAAAGATT CTCAGCAGGA GACAGATCCA CCTCCGAGAG CTTCAAAGAG GTGAGGCCGA GACCTTTACC AGTTCATCGG ACAAACGATC CTCCCAGGAC ATCGGTCCAT CTCTTCAAGA CTCCGGGGAG CTTCACCGGA TCCTTAAATC GACGCTCTCC CTCTCTCTGC AGCTCGATGA CTCTTATCAA ACACCCCACG AGTTAGAAAT CAGAGGATAG AATAAAGTCA ATCGTCGGAT TAAAAATTCA ACAGGATCGT CGCAGGCTAG GTGTGCAGAA ATGGGCGAAG AGCGAGAAAG AGCATTGCTA ATGAAGATGG CAGCAATGTT GTCGTTGCTG CTGTCAGTCG TCGTTGCCGA TGCCTACTAT TCGGAGAGTG ACGAGGCCGA GACGCTGACA TACTTCGTCC ACTGCACGGA CGAGGTGGCG ATTGTGGCAG GCCCGGGGAA GGACACGCGC GACATGAACA AACTGGCATT CGGGAGCACT CTCATCTACG ACAACGATGT CACCGAAGGA CCAGAACTGA CCTCCAGGCA CATCGGCAGG CGGCAAGGCA TGGCGGTCAT GGACAACTTC GCAGGCCAGA ACTACTACCT CCTCTTCACG GTCATCTTCG AGCAGCACGA CAAGTACCAG GGCACTCTGC AGGTCCAGGG GACGGAGATC GGCCATGGAC CCCGCGAGAT TTCCATCGTC GGGGGCACGG GTGATTTCCG AGGCGCCAGA GGCTACTCCA CATTCTACCT GCACACCGCC ATTCCCTACC CCATTATCAA GCAGAGCTTC CACATCTACA AGAGCTCCTT CAACTACAAG CCCTCGATGA TGCAGGCATC TGAATGAGCC GACTGGCTAC AAACGCACAC GGTGGAACTC TTCGGATCGG TGGATCTGAG AACACTGTAA TCGACACGAG GTCGCTCTTG ATCGTAGATA GTAAATGCGC CCGCTTCTTC GGTCTTGCAA GTTCTGTATC GGTGTTCGAA GATAGAGCGG GAGGAGATCC TAGTCAGGGC AGCACATTTT TACGCTTCTC TACGAGATTG CTTCTTTATT CTTCAAAAAA GAAATAAATT TGGCACATGC TCTTCTTCGG GCGTCTGTTG ATGGGAGTCA ATGATGAGTT TTCGTATTTC AAATGCCACC ATGCACCTTG CATACCTCTA GCGATGTGCT TGATTTTGTG GTTTTCTATG GTACCATAAC AAGATAAAGA ATAC |
CDS |
| >Mp4g14630.1 ATGGGCGAAG AGCGAGAAAG AGCATTGCTA ATGAAGATGG CAGCAATGTT GTCGTTGCTG CTGTCAGTCG TCGTTGCCGA TGCCTACTAT TCGGAGAGTG ACGAGGCCGA GACGCTGACA TACTTCGTCC ACTGCACGGA CGAGGTGGCG ATTGTGGCAG GCCCGGGGAA GGACACGCGC GACATGAACA AACTGGCATT CGGGAGCACT CTCATCTACG ACAACGATGT CACCGAAGGA CCAGAACTGA CCTCCAGGCA CATCGGCAGG CGGCAAGGCA TGGCGGTCAT GGACAACTTC GCAGGCCAGA ACTACTACCT CCTCTTCACG GTCATCTTCG AGCAGCACGA CAAGTACCAG GGCACTCTGC AGGTCCAGGG GACGGAGATC GGCCATGGAC CCCGCGAGAT TTCCATCGTC GGGGGCACGG GTGATTTCCG AGGCGCCAGA GGCTACTCCA CATTCTACCT GCACACCGCC ATTCCCTACC CCATTATCAA GCAGAGCTTC CACATCTACA AGAGCTCCTT CAACTACAAG CCCTCGATGA TGCAGGCATC TGAATGA |
Protein |
| >Mp4g14630.1 MGEERERALL MKMAAMLSLL LSVVVADAYY SESDEAETLT YFVHCTDEVA IVAGPGKDTR DMNKLAFGST LIYDNDVTEG PELTSRHIGR RQGMAVMDNF AGQNYYLLFT VIFEQHDKYQ GTLQVQGTEI GHGPREISIV GGTGDFRGAR GYSTFYLHTA IPYPIIKQSF HIYKSSFNYK PSMMQASE |