Mp4g14720



Description

Annotation

Database ID Description
Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs].
FunFam G3DSA:3.40.50.920:FF:000002 1-deoxy-D-xylulose-5-phosphate synthase
Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase
Gene3D G3DSA:3.40.50.970 -
CDD cd02007 TPP_DXS
SUPERFAMILY SSF52922 TK C-terminal domain-like
CDD cd07033 TPP_PYR_DXS_TK_like
Pfam PF02780 Transketolase, C-terminal domain
SUPERFAMILY SSF52518 Thiamin diphosphate-binding fold (THDP-binding)
SMART SM00861 Transket_pyr_3
Gene3D G3DSA:3.40.50.920 -
ProSitePatterns PS00801 Transketolase signature 1.
ProSitePatterns PS00802 Transketolase signature 2.
FunFam G3DSA:3.40.50.970:FF:000005 1-deoxy-D-xylulose-5-phosphate synthase
NCBIfam TIGR00204 1-deoxy-D-xylulose-5-phosphate synthase
PANTHER PTHR43322 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED
Pfam PF02779 Transketolase, pyrimidine binding domain
KEGG K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
KOG KOG0523 Transketolase; [G]
MapolyID Mapoly0070s0009 -
GO GO:0003824 catalytic activity
GO GO:0016744 transketolase or transaldolase activity
GO GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity
GO GO:0016114 terpenoid biosynthetic process

Nomenclature

Gene symbol Product Transcript ID Status
MpDXS2 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Associated Literature (AI-based literature mining, Beta-version)

Second DXS isoform; localized to plastids and associated with oil body cell isoprenoid biosynthesis in this study.

1 core 1 peripheral

Forestier ECF, Asprilla P, Bonter I, Romani F, Frangedakis E, Haseloff J. (2026) · Communications biology  research experimental subject
Second DXS isoform; localized to plastids and associated with oil body cell isoprenoid biosynthesis in this study.
Romani, F., et al. (2020) · Current Biology  research experimental background
Deoxyxylulose-5-phosphate synthase (Mp4g14720); MpC1HDZ-regulated terpene-precursor biosynthesis gene.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g14720.1 chr4:19323983..19328948 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g14720 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g14720 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.