Mp4g14870
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Gene3D | G3DSA:1.10.287.700 | Helix hairpin bin |
| PANTHER | PTHR47877 | LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN |
| KOG | KOG4744 | Uncharacterized conserved protein; N-term missing; [S] |
| MapolyID | Mapoly0119s0009 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLEA-like26 | Late-embryogenesis abundant protein | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Late-embryogenesis abundant protein (from nomenclature)
0 core 1 peripheral
Jibran, R., et al. (2024b)
· Frontiers in Plant Science research experimental background
LEA protein gene; down DEG.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g14870 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g14870.1 GCGATCTCTC TTACTTCATT CACAAACATT TGTCCACTCA GACAGCAGAA TTTCAGCTTC AAGACGTTTT TCCCCGTGCA TTGATTCAGT TCAGTTCTAC ATCTACATCT ACATCTTAGT TTTTCAGCAA TCTTTGAGTG TCGATTTCTG ATACCATGGC CAGCAACCAG TACAACAAGG GATACGACGC CACTGCCCAG AAGACCGAGG AAGCGAAGAG GACGATGGCT GACACGGCCG ACCGCACCAA GCAATCTGCA GCCGAGACCG CAGACAAGAC CAAGCAAGTC GGAGCTGAGA AATCCGAGCA AGCTCAGAAC ACTGCCTCGA ACATCGCCGG AACGGTGCAA GAGAAGGCTC AAAACGCTTG GGACCAGACG AAGCAAGCTG CTGCAAACAC CAACCAGTAC GTCCAGGAGA AGGCTGGTCA AGCTACTCAA TATGGAGCAG ACACTTTGGA GTCGGCCAAG CAGACCACCG CCGATTCTGC GTCTACTGCA CAGAAGAAAG CCGTAGAGGC GAAAGACTTC ACCGTCGACA AGGCAGGACA GGGTAAGGAT GTCGCATCTG ACAGAGCAGG AAAGGCAGGA CAGTACTCGG CCGACTCTGC AGCATCGACC AAGGATACCA CTGGAAGCTA CTTACAAGGA GGTGTCGATG CTGTCAAAGG AGCCGTCCTC GGTGCCAAGG ATGCACTTTT TGGCCAGAGT GGTGCCAGCA AGTAAGCAGG GGATGAAGAA GAGTACAGTT AAAATGTTGA TAGCTAGTCC GGAATGTACA TATTGAATCC CAGTGTGTGC AGTGCACATG ATTTTTTGAG GGAAATTCTT |
mRNA UTR + CDS |
| >Mp4g14870.1 GCGATCTCTC TTACTTCATT CACAAACATT TGTCCACTCA GACAGCAGAA TTTCAGCTTC AAGACGTTTT TCCCCGTGCA TTGATTCAGT TCAGTTCTAC ATCTACATCT ACATCTTAGT TTTTCAGCAA TCTTTGAGTG TCGATTTCTG ATACCATGGC CAGCAACCAG TACAACAAGG GATACGACGC CACTGCCCAG AAGACCGAGG AAGCGAAGAG GACGATGGCT GACACGGCCG ACCGCACCAA GCAATCTGCA GCCGAGACCG CAGACAAGAC CAAGCAAGTC GGAGCTGAGA AATCCGAGCA AGCTCAGAAC ACTGCCTCGA ACATCGCCGG AACGGTGCAA GAGAAGGCTC AAAACGCTTG GGACCAGACG AAGCAAGCTG CTGCAAACAC CAACCAGTAC GTCCAGGAGA AGGCTGGTCA AGCTACTCAA TATGGAGCAG ACACTTTGGA GTCGGCCAAG CAGACCACCG CCGATTCTGC GTCTACTGCA CAGAAGAAAG CCGTAGAGGC GAAAGACTTC ACCGTCGACA AGGCAGGACA GGGTAAGGAT GTCGCATCTG ACAGAGCAGG AAAGGCAGGA CAGTACTCGG CCGACTCTGC AGCATCGACC AAGGATACCA CTGGAAGCTA CTTACAAGGA GGTGTCGATG CTGTCAAAGG AGCCGTCCTC GGTGCCAAGG ATGCACTTTT TGGCCAGAGT GGTGCCAGCA AGTAAGCAGG GGATGAAGAA GAGTACAGTT AAAATGTTGA TAGCTAGTCC GGAATGTACA TATTGAATCC CAGTGTGTGC AGTGCACATG ATTTTTTGAG GGAAATTCTT |
CDS |
| >Mp4g14870.1 ATGGCCAGCA ACCAGTACAA CAAGGGATAC GACGCCACTG CCCAGAAGAC CGAGGAAGCG AAGAGGACGA TGGCTGACAC GGCCGACCGC ACCAAGCAAT CTGCAGCCGA GACCGCAGAC AAGACCAAGC AAGTCGGAGC TGAGAAATCC GAGCAAGCTC AGAACACTGC CTCGAACATC GCCGGAACGG TGCAAGAGAA GGCTCAAAAC GCTTGGGACC AGACGAAGCA AGCTGCTGCA AACACCAACC AGTACGTCCA GGAGAAGGCT GGTCAAGCTA CTCAATATGG AGCAGACACT TTGGAGTCGG CCAAGCAGAC CACCGCCGAT TCTGCGTCTA CTGCACAGAA GAAAGCCGTA GAGGCGAAAG ACTTCACCGT CGACAAGGCA GGACAGGGTA AGGATGTCGC ATCTGACAGA GCAGGAAAGG CAGGACAGTA CTCGGCCGAC TCTGCAGCAT CGACCAAGGA TACCACTGGA AGCTACTTAC AAGGAGGTGT CGATGCTGTC AAAGGAGCCG TCCTCGGTGC CAAGGATGCA CTTTTTGGCC AGAGTGGTGC CAGCAAGTAA |
Protein |
| >Mp4g14870.1 MASNQYNKGY DATAQKTEEA KRTMADTADR TKQSAAETAD KTKQVGAEKS EQAQNTASNI AGTVQEKAQN AWDQTKQAAA NTNQYVQEKA GQATQYGADT LESAKQTTAD SASTAQKKAV EAKDFTVDKA GQGKDVASDR AGKAGQYSAD SAASTKDTTG SYLQGGVDAV KGAVLGAKDA LFGQSGASK |