Mp4g16930



Description

Annotation

Database ID Description
PANTHER PTHR32285 PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF14416 PMR5 N terminal Domain
Pfam PF13839 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
MapolyID Mapoly0148s0027 -
GO GO:0016413 O-acetyltransferase activity
GO GO:0005794 Golgi apparatus
GO GO:0016740 transferase activity

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Pectin O-acetyltransferase (Mapoly0148s0027).

1 core 0 peripheral

Zhong, R., et al. (2024) · Plant and Cell Physiology  research experimental subject
Pectin O-acetyltransferase (Mapoly0148s0027).

Transcript models

Transcript ID Location Sequences Extract region
Mp4g16930.1 chr4:22774990..22780910 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g16930 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g16930 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.