Mp4g17430
Description
Annotation
| Database | ID | Description |
|---|---|---|
| FunFam | G3DSA:3.30.730.10:FF:000001 | Ethylene-responsive transcription factor 2 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| CDD | cd00018 | AP2 |
| Gene3D | G3DSA:3.30.730.10 | AP2/ERF domain |
| PRINTS | PR00367 | Ethylene responsive element binding protein signature |
| ProSiteProfiles | PS51032 | AP2/ERF domain profile. |
| SMART | SM00380 | rav1_2 |
| SUPERFAMILY | SSF54171 | DNA-binding domain |
| Pfam | PF00847 | AP2 domain |
| PANTHER | PTHR31190 | DNA-BINDING DOMAIN |
| KEGG | K09286 | EREBP-like factor |
| MapolyID | Mapoly0041s0025 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0009873 | ethylene-activated signaling pathway |
| GO | GO:0003677 | DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpERF9 | transcription factor, AP2/ERF | Published |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, AP2/ERF (from nomenclature)
0 core 1 peripheral
Ishida, S., et al. (2022)
· Plant & Cell Physiology research experimental background
Class-X ERF (Mp4g17430); regeneration-associated DEG.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g17430 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g17430.1 CCCCATCTTC AGTGAGCCTC CAGTTCCAGT TGCAGCTGCA GACAGCAGCA GCCGACGGAC GATGCGAGCA TTCCCGTTCG GGTGGGCAGC TAGCGAGCGA GTCAAGGCCT GCGATCCTTG CCACACGAGA GCTGCGGCTG GACTCAGTGC ACCCCACTCT TCCCCGCGAA GCAGCTGGGC GAACACTCAT GCAAATTGCC AAGATTCCCA AAGTGTTTAC AGCAGCTGCT CTAGCTCCCC AGCTGTAGGA GAGAGCTTAG GCACTTGCTG TAACTGCATC CCACTTGTCT GCAGTAACTA ATGAGCCCGT GTCCGAGGGC CGGATAGAAT TCCGATTACA GCTCTCTCTT TTGGGTGAGA TCGAGCTCGA CCGATATTCG ACCTGGCCAG CCTCAGGAGT CTGTCCGTCT GGACGTAGTT GTAGTAGTAG TAGTAGGAGA GAAGGAGGAG GAGGAGAAGG AGGAGAAGAA GAAGTAGTAG TAATAGTAGT AGTGGTAGCA CTCTCGGTCG CGGTCGTGGC AGTCAGTCCA CAGCACTTGC TCACAGATGT ACAGCAGGAT CGAGCAGCAT ATAGAATTTA CTGCTCAATT CTCACCCAGA GGGCGATATA TAAGGACAGA AGGAGATTTG GAATGTTAGG AACGTAGAGC ATTCGCTCGA GGTCGAGGTC GAGGTGAGGA AGCATGTAAA TCCTGAGCCG TGGCTTGTAC AGGAAATAGG ACTTGTCTAC AGGGATCTGC GGTTTGAATT GAGGGAGAAT CGGAAGATTC CGTTCGAAGG CGAGGGAGCT GGGAGGGATA TGGAGGACAG TCTGCTGGAG GACGCCGAAT CCGCAGCACC CGAAGCGCAT TTGCAGCAGG CGCAGCAGCA GCAGAAAGGG AACCGACAGT GGGCGAGGCC AGCGCAGCAG GCGCCAATGC AGACGCTGTA CGAGGGATGC GCCGCGAGCA TGGGCCAGTG GAACAGCCTC GGCGATCCGG AGTTCCTGAA TTACGCCCCG ACGCTGAATG CGGTTTCGGG GCTGGAGACG ATCGAGGGCG TCTCGTCGAC GATGGTCATT CGGGCGGCAG CTGCAGCTGC ACCGCTTCCG AGGTTCGCCG GGGCGACTTC GAATCTCGGT GCCGGGGACG ACAACCTCTC GGACCTCCAG ACGATCCAAG GCTTTTCGAA CTGGAGCGCG GCCAATTCGG GCGACCAGAA TCGAATTAGC GGCGGCGGAT GGACATTCGG TGGTTTGCAT CAGGCCGGAG CTGCTCCTGA AGAGAGCACG GCCAGCGATG CACGCAACTC GGCACGGAGA GTGGGAAGAG CCGATTCCAT GAGTTCTTAC AGTTCGGCAG ATTCCACCTC CGAGCTCCAA GCTCCCTCTG GGCCCGGCGA AGGTACTCTC CTTCTAACCG TCCTCCAGTC TTGTCTGCAT TTCCGTAGAG TCTTTCTCTC TCGGTCCTTA CGGCAGAAAA GCAAAATTCT CAGACCTCTT CTGCACAATT TCGGTACACT ACTCTTTCCC GACCTTCTCT TCGAGTCCGT TCAACTCCAA CACCCACCCA CACACACACG CACACACACT AATAGTTCTC GCACGCACAT GCAGATGATC AGATGGAAAG AAGTGAAAAA GTGAAGTTGT TGTTGTTGAT GATGATGATG TTGGAATTGG AAGAGATCAA CGCTGTCGTA TGATGAGCAT TATTGGGATC TACCGTATGG TCGGTCGGTT GGTCGGTTGG TTTGATGTGA GAGAGACTGT GAGTGAGTGA GATACCGAAC TTCGCAAATT TCAGGGACTG CATTTTCCGA GAAGTGAGTG AATTCGGATG GCCTGACAAA TACGAGTTCC AAGTTCAGTA TCAGAGTTCG GAGGATTTGA ATACAGGACA ATGGAACAGT GCTTTAGGCC GACACTGAGA CTGAACTCGG GATGATGAAG TACAGTACTC CGGAGGTTCC GTGGCTAGCA TGCATGAAAG GGTGAGTGCC AGAAGGTGCG CATGCGGCTA GCGCTGCTAG AATGATTACA AAGGTGCTTG TCTACTCCAT AAAAGAGGCA ATCGCATCAC CACCGAAAAA GGCAAGTATT CAACTAACTT AGCTTCTAGG TAGACGAATC TCGAGGTATG TACTTGGTTA CTTACTCCTC CTCAGTAGTT GTCGTAGTAG TAGAACTAGT GGTGGTGGTT CTAGGGGAAG TAGTAGTGAG CACTCTATTT CGGGACCGTG TGGGACGGGC ATGGCACATG GCATGGACTG GATTCTCCGC ATCGACCATT CGTTCGATCG TCCCCTCATT GTGCTTTCAT TGCTTCGTCG TGTGAGTTCG TTAGGAGTTT TGCCCCGAGG TGTGGTGTGG TGTGGTGACC CATTGTTTGT AGAGGGTCCC GGAGTCCGCT GCCGAGGTAA GTAAGTCGTG ACGATGTTGA GGTGATTCTG ATTGAAGCTG TGATTCTGGT GAGGGGAGCT GATAACGAGC CGTGGTGGAG TTCTTATCTG TTCTGTGGGT GCAGTGGTTG CAGACGAGGT CGAAGAAAAA AGAGCGACTT CCATCGCATC GTCTCGTCTC ATCTCATCCC GTATCGTCTC GTATCGTTCG ATCTAGGTTG AGGTACAGAA ATCATATGTG AGACTTGGGA GGTCGGGCCA TATCCATGAG TATTGATCGG AGGCTTCTGT GTGCTTGATT GCGTGGTGTT TGCAGAGGAA AAATCCTCCG CAGTCGAAGA ATCCGCCAGT GCCGCGAAAA GAAAGAAATT CCGAGGGGTG CGCCAGAGGG CCTGGGGAAA ATGGGCTGCC GAAATTCGCC ACCCGAAGAA AGCAACGCGC GTGTGGCTCG GCACCTACGA CACTCCCGAG GAGGCTGCTA GAGCTTACGA CAAAGCTGCC ATCGACTTCC GAGGTCAGCG TGCGAAGCTC AATTTCCCGG ATTCCGTCGG CCCGGTGCCC GGCTCTGCTG CAGCAGCTCA AGCTGCAAAT GTGCCCCGAC GAGTCCCCTC GCTTCCCTCG GACGCTCGAA AAGACTCCAT CTCCTCGCCC GCTGCGCCCA AGTCTGCTGC TGCGGCCCCG CCACATGCCG CAACAGCCAC TGTCATCGCA GCAGCTGCCG CTGTCTCGGT ACCGATGCCT CCACAACAGG TGCAGCAGCA TCAGCAGCAG CAGCAGATTG TCTACTCTTC GCAATTTTCG ATAAATACCG ACGTATGGTC GCGGGACGAG AACGACATGA TCTCAGGAGG AAGCCAGTGG CCATCTCTGA CCTTGGACGT GAATTGCGAT TGGCGAGGCT CGGAAGTACC ATCCGTCGCC ACCAGCAGCT GGAGGACCCT GGCAGAGGAA GGTACGCTGG AAAAGGCTTC GACATCCATG ATTCCCGTGG TAGCTTCAGC AGCCATGCAA CTTACGCGAC CCGAATGGCA GCAGGCGGCG GGGGCCGGAG GAGCAGGATT AGCTCAGAAT GCGCTCGATC TCATCCTGGC GCAACAGCTG CAGCAGCAGC AGCGACGTTC GGTGCTGGAC AATCCGAGCA TCGACTCGAG ATTTCAAAAT CTCACTGTAC ACGTCCAAGC GTCGCCATTG GCACCGAATC AGGCGAGTGA TCTGCTGCCA GCTGCGGTAG CAGCCGCAGC GGCTGCCGAC GCCTCGTTCG ATCTGGAGAA TTTCATCGAG GAAGCTGTGC AACGCCCTCT GAGCGACCAC ATACCCACTT CCCAATACAT GACAGCCGAA CGCAACTTCA GCTCGGGACT CTTCTGGAAT TATGATCAGG ACGCGCAGCA TCACGATCAT CCACCCGCCT GAAGGTAGTT AGTTGCTGGC GAAACATCAG ACAGACGCAT CACGGCACGC ACTTGGGGGC CCTCTTCTTC TCGAGCTAGA TTTCAGTGCC TTAAGTTGCA TTGGTGACTC ATCTCGCATG GCAGCTGCAT GCATTTGTTA ACTGACAAAA GGTGCCCTAG CAGATGCATG AGTTGCAGTT TTTCAGGTGA ATTTGGATGG TGCCATATGT ACATGAGGCC CTACTGTACT GTATCATCCA CCAGTTTTCT CGATCAACAA CTTTTAGCCT TTCGACAAAC GGCTTTGTTC AGCGCATCAT GTGTCCTGCA GATGTTTTTA TGGCCCCTCG GATGAAAGTC ATGCCATAAT ATCTCTGGAT CCGTTCATCT TTTTCGTCGA ATGACTGAAT AGTCAGACAC TTAAGCATTA CCAATTTTTG CAGTTTTATA GATTTCGAGA CACGATATTC CAACTTTTTT CTCGATTGGA CTGGCTCGAG CTTCTTATAT TTATACCACT ACTGCTACTA CTTCTCCTCG TCATTGTGTG ACAAATCCTG GA |
mRNA UTR + CDS |
| >Mp4g17430.1 CCCCATCTTC AGTGAGCCTC CAGTTCCAGT TGCAGCTGCA GACAGCAGCA GCCGACGGAC GATGCGAGCA TTCCCGTTCG GGTGGGCAGC TAGCGAGCGA GTCAAGGCCT GCGATCCTTG CCACACGAGA GCTGCGGCTG GACTCAGTGC ACCCCACTCT TCCCCGCGAA GCAGCTGGGC GAACACTCAT GCAAATTGCC AAGATTCCCA AAGTGTTTAC AGCAGCTGCT CTAGCTCCCC AGCTGTAGGA GAGAGCTTAG GCACTTGCTG TAACTGCATC CCACTTGTCT GCAGTAACTA ATGAGCCCGT GTCCGAGGGC CGGATAGAAT TCCGATTACA GCTCTCTCTT TTGGGAAATA GGACTTGTCT ACAGGGATCT GCGGTTTGAA TTGAGGGAGA ATCGGAAGAT TCCGTTCGAA GGCGAGGGAG CTGGGAGGGA TATGGAGGAC AGTCTGCTGG AGGACGCCGA ATCCGCAGCA CCCGAAGCGC ATTTGCAGCA GGCGCAGCAG CAGCAGAAAG GGAACCGACA GTGGGCGAGG CCAGCGCAGC AGGCGCCAAT GCAGACGCTG TACGAGGGAT GCGCCGCGAG CATGGGCCAG TGGAACAGCC TCGGCGATCC GGAGTTCCTG AATTACGCCC CGACGCTGAA TGCGGTTTCG GGGCTGGAGA CGATCGAGGG CGTCTCGTCG ACGATGGTCA TTCGGGCGGC AGCTGCAGCT GCACCGCTTC CGAGGTTCGC CGGGGCGACT TCGAATCTCG GTGCCGGGGA CGACAACCTC TCGGACCTCC AGACGATCCA AGGCTTTTCG AACTGGAGCG CGGCCAATTC GGGCGACCAG AATCGAATTA GCGGCGGCGG ATGGACATTC GGTGGTTTGC ATCAGGCCGG AGCTGCTCCT GAAGAGAGCA CGGCCAGCGA TGCACGCAAC TCGGCACGGA GAGTGGGAAG AGCCGATTCC ATGAGTTCTT ACAGTTCGGC AGATTCCACC TCCGAGCTCC AAGCTCCCTC TGGGCCCGGC GAAGAGGAAA AATCCTCCGC AGTCGAAGAA TCCGCCAGTG CCGCGAAAAG AAAGAAATTC CGAGGGGTGC GCCAGAGGGC CTGGGGAAAA TGGGCTGCCG AAATTCGCCA CCCGAAGAAA GCAACGCGCG TGTGGCTCGG CACCTACGAC ACTCCCGAGG AGGCTGCTAG AGCTTACGAC AAAGCTGCCA TCGACTTCCG AGGTCAGCGT GCGAAGCTCA ATTTCCCGGA TTCCGTCGGC CCGGTGCCCG GCTCTGCTGC AGCAGCTCAA GCTGCAAATG TGCCCCGACG AGTCCCCTCG CTTCCCTCGG ACGCTCGAAA AGACTCCATC TCCTCGCCCG CTGCGCCCAA GTCTGCTGCT GCGGCCCCGC CACATGCCGC AACAGCCACT GTCATCGCAG CAGCTGCCGC TGTCTCGGTA CCGATGCCTC CACAACAGGT GCAGCAGCAT CAGCAGCAGC AGCAGATTGT CTACTCTTCG CAATTTTCGA TAAATACCGA CGTATGGTCG CGGGACGAGA ACGACATGAT CTCAGGAGGA AGCCAGTGGC CATCTCTGAC CTTGGACGTG AATTGCGATT GGCGAGGCTC GGAAGTACCA TCCGTCGCCA CCAGCAGCTG GAGGACCCTG GCAGAGGAAG GTACGCTGGA AAAGGCTTCG ACATCCATGA TTCCCGTGGT AGCTTCAGCA GCCATGCAAC TTACGCGACC CGAATGGCAG CAGGCGGCGG GGGCCGGAGG AGCAGGATTA GCTCAGAATG CGCTCGATCT CATCCTGGCG CAACAGCTGC AGCAGCAGCA GCGACGTTCG GTGCTGGACA ATCCGAGCAT CGACTCGAGA TTTCAAAATC TCACTGTACA CGTCCAAGCG TCGCCATTGG CACCGAATCA GGCGAGTGAT CTGCTGCCAG CTGCGGTAGC AGCCGCAGCG GCTGCCGACG CCTCGTTCGA TCTGGAGAAT TTCATCGAGG AAGCTGTGCA ACGCCCTCTG AGCGACCACA TACCCACTTC CCAATACATG ACAGCCGAAC GCAACTTCAG CTCGGGACTC TTCTGGAATT ATGATCAGGA CGCGCAGCAT CACGATCATC CACCCGCCTG AAGGTAGTTA GTTGCTGGCG AAACATCAGA CAGACGCATC ACGGCACGCA CTTGGGGGCC CTCTTCTTCT CGAGCTAGAT TTCAGTGCCT TAAGTTGCAT TGGTGACTCA TCTCGCATGG CAGCTGCATG CATTTGTTAA CTGACAAAAG GTGCCCTAGC AGATGCATGA GTTGCAGTTT TTCAGGTGAA TTTGGATGGT GCCATATGTA CATGAGGCCC TACTGTACTG TATCATCCAC CAGTTTTCTC GATCAACAAC TTTTAGCCTT TCGACAAACG GCTTTGTTCA GCGCATCATG TGTCCTGCAG ATGTTTTTAT GGCCCCTCGG ATGAAAGTCA TGCCATAATA TCTCTGGATC CGTTCATCTT TTTCGTCGAA TGACTGAATA GTCAGACACT TAAGCATTAC CAATTTTTGC AGTTTTATAG ATTTCGAGAC ACGATATTCC AACTTTTTTC TCGATTGGAC TGGCTCGAGC TTCTTATATT TATACCACTA CTGCTACTAC TTCTCCTCGT CATTGTGTGA CAAATCCTGG A |
CDS |
| >Mp4g17430.1 ATGGAGGACA GTCTGCTGGA GGACGCCGAA TCCGCAGCAC CCGAAGCGCA TTTGCAGCAG GCGCAGCAGC AGCAGAAAGG GAACCGACAG TGGGCGAGGC CAGCGCAGCA GGCGCCAATG CAGACGCTGT ACGAGGGATG CGCCGCGAGC ATGGGCCAGT GGAACAGCCT CGGCGATCCG GAGTTCCTGA ATTACGCCCC GACGCTGAAT GCGGTTTCGG GGCTGGAGAC GATCGAGGGC GTCTCGTCGA CGATGGTCAT TCGGGCGGCA GCTGCAGCTG CACCGCTTCC GAGGTTCGCC GGGGCGACTT CGAATCTCGG TGCCGGGGAC GACAACCTCT CGGACCTCCA GACGATCCAA GGCTTTTCGA ACTGGAGCGC GGCCAATTCG GGCGACCAGA ATCGAATTAG CGGCGGCGGA TGGACATTCG GTGGTTTGCA TCAGGCCGGA GCTGCTCCTG AAGAGAGCAC GGCCAGCGAT GCACGCAACT CGGCACGGAG AGTGGGAAGA GCCGATTCCA TGAGTTCTTA CAGTTCGGCA GATTCCACCT CCGAGCTCCA AGCTCCCTCT GGGCCCGGCG AAGAGGAAAA ATCCTCCGCA GTCGAAGAAT CCGCCAGTGC CGCGAAAAGA AAGAAATTCC GAGGGGTGCG CCAGAGGGCC TGGGGAAAAT GGGCTGCCGA AATTCGCCAC CCGAAGAAAG CAACGCGCGT GTGGCTCGGC ACCTACGACA CTCCCGAGGA GGCTGCTAGA GCTTACGACA AAGCTGCCAT CGACTTCCGA GGTCAGCGTG CGAAGCTCAA TTTCCCGGAT TCCGTCGGCC CGGTGCCCGG CTCTGCTGCA GCAGCTCAAG CTGCAAATGT GCCCCGACGA GTCCCCTCGC TTCCCTCGGA CGCTCGAAAA GACTCCATCT CCTCGCCCGC TGCGCCCAAG TCTGCTGCTG CGGCCCCGCC ACATGCCGCA ACAGCCACTG TCATCGCAGC AGCTGCCGCT GTCTCGGTAC CGATGCCTCC ACAACAGGTG CAGCAGCATC AGCAGCAGCA GCAGATTGTC TACTCTTCGC AATTTTCGAT AAATACCGAC GTATGGTCGC GGGACGAGAA CGACATGATC TCAGGAGGAA GCCAGTGGCC ATCTCTGACC TTGGACGTGA ATTGCGATTG GCGAGGCTCG GAAGTACCAT CCGTCGCCAC CAGCAGCTGG AGGACCCTGG CAGAGGAAGG TACGCTGGAA AAGGCTTCGA CATCCATGAT TCCCGTGGTA GCTTCAGCAG CCATGCAACT TACGCGACCC GAATGGCAGC AGGCGGCGGG GGCCGGAGGA GCAGGATTAG CTCAGAATGC GCTCGATCTC ATCCTGGCGC AACAGCTGCA GCAGCAGCAG CGACGTTCGG TGCTGGACAA TCCGAGCATC GACTCGAGAT TTCAAAATCT CACTGTACAC GTCCAAGCGT CGCCATTGGC ACCGAATCAG GCGAGTGATC TGCTGCCAGC TGCGGTAGCA GCCGCAGCGG CTGCCGACGC CTCGTTCGAT CTGGAGAATT TCATCGAGGA AGCTGTGCAA CGCCCTCTGA GCGACCACAT ACCCACTTCC CAATACATGA CAGCCGAACG CAACTTCAGC TCGGGACTCT TCTGGAATTA TGATCAGGAC GCGCAGCATC ACGATCATCC ACCCGCCTGA |
Protein |
| >Mp4g17430.1 MEDSLLEDAE SAAPEAHLQQ AQQQQKGNRQ WARPAQQAPM QTLYEGCAAS MGQWNSLGDP EFLNYAPTLN AVSGLETIEG VSSTMVIRAA AAAAPLPRFA GATSNLGAGD DNLSDLQTIQ GFSNWSAANS GDQNRISGGG WTFGGLHQAG AAPEESTASD ARNSARRVGR ADSMSSYSSA DSTSELQAPS GPGEEEKSSA VEESASAAKR KKFRGVRQRA WGKWAAEIRH PKKATRVWLG TYDTPEEAAR AYDKAAIDFR GQRAKLNFPD SVGPVPGSAA AAQAANVPRR VPSLPSDARK DSISSPAAPK SAAAAPPHAA TATVIAAAAA VSVPMPPQQV QQHQQQQQIV YSSQFSINTD VWSRDENDMI SGGSQWPSLT LDVNCDWRGS EVPSVATSSW RTLAEEGTLE KASTSMIPVV ASAAMQLTRP EWQQAAGAGG AGLAQNALDL ILAQQLQQQQ RRSVLDNPSI DSRFQNLTVH VQASPLAPNQ ASDLLPAAVA AAAAADASFD LENFIEEAVQ RPLSDHIPTS QYMTAERNFS SGLFWNYDQD AQHHDHPPA |