Mp4g18020



Description

Annotation

Database ID Description
Gene3D G3DSA:1.20.120.1630 -
PANTHER PTHR21257 DELTA(14)-STEROL REDUCTASE
Pfam PF01222 Ergosterol biosynthesis ERG4/ERG24 family
MobiDBLite mobidb-lite consensus disorder prediction
KEGG K00213 7-dehydrocholesterol reductase [EC:1.3.1.21]
KOG KOG1435 Sterol reductase/lamin B receptor; [IT]
MapolyID Mapoly0041s0083 -
GO GO:0009918 obsolete sterol delta7 reductase activity
GO GO:0030176 obsolete integral component of endoplasmic reticulum membrane
GO GO:0016132 brassinosteroid biosynthetic process
GO GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
GO GO:0016126 sterol biosynthetic process
GO GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpDWF5-like Secondary metabolism enzyme, sterol biosynthesis Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp4g18020.1 chr4:23836582..23845751 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g18020 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g18020 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.