Mp4g19140



Description

Annotation

Database ID Description
PANTHER PTHR48047 GLYCOSYLTRANSFERASE
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile.
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B;
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase
KOG KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase; N-term missing; [GC]
MapolyID Mapoly0169s0030 -
GO GO:0035251 UDP-glucosyltransferase activity

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Locus ID for MpSGF11A, listed in the candidate peptide gene table.

0 core 1 peripheral

Kobayashi, H., et al. (2023) · Frontiers in Plant Science  research sequence background
Locus ID for MpSGF11A, listed in the candidate peptide gene table.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g19140.1 chr4:25693615..25696935 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g19140 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g19140 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.