Mp4g19200
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF01434 | Peptidase family M41 |
| SMART | SM00382 | AAA_5 |
| FunFam | G3DSA:3.40.50.300:FF:000001 | ATP-dependent zinc metalloprotease FtsH |
| FunFam | G3DSA:1.10.8.60:FF:000001 | ATP-dependent zinc metalloprotease FtsH |
| Gene3D | G3DSA:3.30.720.210 | - |
| SUPERFAMILY | SSF140990 | FtsH protease domain-like |
| Gene3D | G3DSA:1.20.58.760 | Peptidase M41 |
| CDD | cd19501 | RecA-like_FtsH |
| NCBIfam | TIGR01241 | ATP-dependent zinc metalloprotease FtsH |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) |
| Pfam | PF17862 | AAA+ lid domain |
| FunFam | G3DSA:3.30.720.210:FF:000002 | ATP-dependent zinc metalloprotease FTSH chloroplastic |
| FunFam | G3DSA:1.20.58.760:FF:000035 | ATP-dependent zinc metalloprotease FTSH 6 chloroplastic |
| PANTHER | PTHR23076 | METALLOPROTEASE M41 FTSH |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases |
| Gene3D | G3DSA:3.40.50.300 | - |
| ProSitePatterns | PS00674 | AAA-protein family signature. |
| Gene3D | G3DSA:1.10.8.60 | - |
| Hamap | MF_01458 | ATP-dependent zinc metalloprotease FtsH [ftsH]. |
| Pfam | PF06480 | FtsH Extracellular |
| KEGG | K03798 | cell division protease FtsH [EC:3.4.24.-] |
| KOG | KOG0731 | AAA+-type ATPase containing the peptidase M41 domain; [O] |
| MapolyID | Mapoly0169s0024 | - |
| GO | GO:0004222 | metalloendopeptidase activity |
| GO | GO:0005524 | ATP binding |
| GO | GO:0008270 | zinc ion binding |
| GO | GO:0016887 | ATP hydrolysis activity |
| GO | GO:0004176 | ATP-dependent peptidase activity |
| GO | GO:0006508 | proteolysis |
| GO | GO:0016020 | membrane |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
UVB-induced chloroplastic ATP-dependent zinc metalloprotease (annotation).
0 core 1 peripheral
Clayton, W. A., et al. (2018)
· Plant Journal research experimental background
UVB-induced chloroplastic ATP-dependent zinc metalloprotease (annotation).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g19200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g19200.1 CGTCTTATAC CCGAACATTC GCTCGTCCGT CCGTCGGGCC CTCTTCTGAG CGCACGTAGA ATAGCTTCAA AAGACTGCAA TCCGCGAGCA GTACAGAGGA CGACGATTAG ACGAGACGAG GGCGCAGAGA GAGGATTTCG TGTCGAGAAA TTTGTGAGTT CTGCGAGCGC GCGAGGGAGG CACGATGGCT GCGGTGACGG GCATGGCGGG GCAGCTGACA CCGACGTTCG TTGCTTCCGA TGGAGCGAAT TCCCTGCGCA AGGGGCTCGC AGGGCAGAAG CTGTCGCTGT TTCTTTGTCC TTCGGTGAAG CAGTCGACGA GAGCTCGCAA GGTGCAGGCT TCTGCGCGCC CGGCCGGTGA GGAATCGAGT GTTAATGAGG GTAAGAGAGG TTTTTTGAAG GGTGTTCTTG GTGCTGCTGG TGTCGGTCTT CCCGCGCTCG CGGCTCAGAG CGCCATGGCT GCCGATGAGC AGGGAGTTGC TTCTTCCAGA ATGTCTTACT CTAGATTTTT GGAGTACTTG GAAATGGACC GTGTGAAGAA GGTTGATTTG TATGAAAACG GAACCATCGC CATTGTAGAA GCTGTGTCGC CTGAGTTGGG GTTCAGGGTT CAGAGAGTAC GAGTGCAGCT GCCGGGTCTT AGCCAGGAGT TGCTTCAGAA ATTCAGGGCC AAGAATATAG ATTTTGCCGC TCACAACCCA CAGGAAGATT CTGGTTCAGT TCTCTTGAAC CTCATCGGCA ACCTTGCCTT CCCCCTTCTC CTTGTCGGAG GTCTTTTCTT CCTGTCCAGG AGGTCACAGG GAGGCTTGGG AGGTCCAGGA GGACCCGGCA ACCCTTTGGC ATTCGGAAAG TCTAAGGCTA AGTTCCAGAT GGAGCCCAAC ACAGGAGTCA CTTTCGACGA TGTCGCAGGG GTAGACGAAG CCAAACAAGA CTTTATGGAG GTTGTCGAAT TTTTGAAGAG ACCAGAAAGG TTCACCGCTG TCGGAGCTAG GATTCCCAAG GGTGTTTTGC TGGTTGGACC ACCCGGAACA GGAAAGACTC TTCTCGCCAA GGCCATTGCT GGCGAAGCTG GAGTTCCATT TTTCTCAATT TCTGGTTCTG AGTTCGTGGA AATGTTTGTT GGTGTGGGAG CATCACGAGT GAGGGATCTC TTCAAGAAGG CCAAGGAAAA TGCTCCTTGC ATTGTGTTCG TGGATGAGAT TGATGCCGTC GGAAGGCAGA GGGGTACCGG TATCGGTGGA GGCAATGACG AGAGAGAACA AACTCTGAAC CAGCTTCTGA CTGAAATGGA TGGATTTGAG GGTAACACCG GAATTATTGT TGTTGCCGCC ACCAATCGGG CTGATATCCT CGACGCTGCT CTGCTTCGAC CTGGACGATT TGATCGTCAG GTACTTTCAG TGTTACTCAG TCTCAGAATG TGTAGATTCA GCTGCTCTAT GTGTTTTGGA TTTTCCTGCG GTGACTTTTT GTAATTCACC TCTTGAATGC CTTTTGTGCA CCCATAATCT CACAGGAAAA GTATCTGTAT TGTTCAGGTT ACCGTGGATG TTCCCGACGT CAGAGGTCGG AGGGAAATTC TCAAGGTTCA TGCTGGAAAC AAGAAGTTCG ATCCCGATGT CTCCCTGGAC ATCATTGCCA TGAGGACGCC TGGATTCAGC GGTGCCGATC TTGCCAATCT TTTGAACGAG GCTGCCATCC TCACGGGAAG GAGGGCAAAG ACTGCCATCT CTGCAAAGGA GATTGACGAC TCCATTGACA GGATCGTCGC AGGAATGGAG GGAACTGTCA TGACCGATGG CAAGAGCAAG AGTCTGGTTG CTTACCATGA AGTCGGACAC GCTGTTTGTG GGTAAGTTGA TATCTTACTT TGATCAATTC TACTCCAGTT CAGACAAATC CAGCCCAGAA AATCATGAAC TAACGCTAAA GGCCTCGGTT GCTCGTCATG CTCTAGAGTG GGTGCAGGGA ATAAGTAATG GATTTTGCGT TAGGAAGCAA TATTCTAGCG TGTGCACTGA GAAGGATAAG TACTGATCAA TTGCACCTGG TGTACAGAAC TTTGACCCCG GGACATGACG CCGTACAAAA GGTTACTCTC ATCCCTAGAG GCCAAGCTCG TGGTCTCACA TGGTTCATTC CTGGTGAAGA TCCTTCTTTG ATCTCCAAGC AACAGATCTT TGCACGTATT GTTGGTGCTT TGGGCGGTAG AGCTGCCGAG GAGATCATCT TTGGAGATGC TGAGGTGACA ACAGGTGCAT CCAGCGATTT GCAGCAAGTG ACTTCCATGG CTAAGCAGGT AAAAGCTCAA TCCAAAATAT ACTTGCTTCA CCGTTTCGCT TGGTTCAGGT TTTGTAAATC TGATTACTTA CTCCACTTCT GCTGTTTCAA CATCTAAGTG GTCGTTTTGG TGGCATGTGA GCAGATGGTC ACTGTTTTCG GTATGTCCGA GATCGGACCT TGGGCTCTGA TGGATCCATC AGCCCAAGGA GGAGATGTTA TCATGAGAAT GATGGCTAGG AACTCCATGT CTGAGAGATT GGCCGAGGAT ATCGACAGAG CAGTGAAGGC CATTTCTGAC AAGGCTTACA TAGTAGCCTT GGAACACATC CGCCAGAACA GAGCTGCCAT TGACAAGATC GTTGAGGTTT TGGTCGAGAA GGAAACTTTG AGTGGGGAGG AGTTCAGGGC AATCTTGTCC GAGTTCACTG AAATCCCAGC TGAGAACCGT GTCGCTGCCG AACAAGCCGT GCCAGTGTAG AGGAATATGT TGATATGGTT GAATCTCAGA TAACTTAAAG AAATGTTGTA TATCAAGTAC AAAGTAGGTG GTTATAAAGC CTCGCATGTA TACTACTTGC TGCTTGTGCA TTTCTGGAGT TTGCAGCAAG TCGCACTCTT CCCCTTTCTG GAGCTCTTGA GGTTGACTGG ACTGGCTAAT GTTAGCTCTT TTGACGAAGG ATGTAAACTA CCGTGTGGTC TCGCATATTC AGATGCTGTC TTCGACCACA TCAATCAAAA TTAGTCACAG TTAGAGAAAA GTCAAATTTT CCTACGGAGC GACAGCACGA CCTGTCTGTC CGGTAGGTGT CCCTGTAATT CTATGACGTA ATGATCATCT CATCGACTAT TGTCGTGTGA ACATCCG |
mRNA UTR + CDS |
| >Mp4g19200.1 CGTCTTATAC CCGAACATTC GCTCGTCCGT CCGTCGGGCC CTCTTCTGAG CGCACGTAGA ATAGCTTCAA AAGACTGCAA TCCGCGAGCA GTACAGAGGA CGACGATTAG ACGAGACGAG GGCGCAGAGA GAGGATTTCG TGTCGAGAAA TTTGTGAGTT CTGCGAGCGC GCGAGGGAGG CACGATGGCT GCGGTGACGG GCATGGCGGG GCAGCTGACA CCGACGTTCG TTGCTTCCGA TGGAGCGAAT TCCCTGCGCA AGGGGCTCGC AGGGCAGAAG CTGTCGCTGT TTCTTTGTCC TTCGGTGAAG CAGTCGACGA GAGCTCGCAA GGTGCAGGCT TCTGCGCGCC CGGCCGGTGA GGAATCGAGT GTTAATGAGG GTAAGAGAGG TTTTTTGAAG GGTGTTCTTG GTGCTGCTGG TGTCGGTCTT CCCGCGCTCG CGGCTCAGAG CGCCATGGCT GCCGATGAGC AGGGAGTTGC TTCTTCCAGA ATGTCTTACT CTAGATTTTT GGAGTACTTG GAAATGGACC GTGTGAAGAA GGTTGATTTG TATGAAAACG GAACCATCGC CATTGTAGAA GCTGTGTCGC CTGAGTTGGG GTTCAGGGTT CAGAGAGTAC GAGTGCAGCT GCCGGGTCTT AGCCAGGAGT TGCTTCAGAA ATTCAGGGCC AAGAATATAG ATTTTGCCGC TCACAACCCA CAGGAAGATT CTGGTTCAGT TCTCTTGAAC CTCATCGGCA ACCTTGCCTT CCCCCTTCTC CTTGTCGGAG GTCTTTTCTT CCTGTCCAGG AGGTCACAGG GAGGCTTGGG AGGTCCAGGA GGACCCGGCA ACCCTTTGGC ATTCGGAAAG TCTAAGGCTA AGTTCCAGAT GGAGCCCAAC ACAGGAGTCA CTTTCGACGA TGTCGCAGGG GTAGACGAAG CCAAACAAGA CTTTATGGAG GTTGTCGAAT TTTTGAAGAG ACCAGAAAGG TTCACCGCTG TCGGAGCTAG GATTCCCAAG GGTGTTTTGC TGGTTGGACC ACCCGGAACA GGAAAGACTC TTCTCGCCAA GGCCATTGCT GGCGAAGCTG GAGTTCCATT TTTCTCAATT TCTGGTTCTG AGTTCGTGGA AATGTTTGTT GGTGTGGGAG CATCACGAGT GAGGGATCTC TTCAAGAAGG CCAAGGAAAA TGCTCCTTGC ATTGTGTTCG TGGATGAGAT TGATGCCGTC GGAAGGCAGA GGGGTACCGG TATCGGTGGA GGCAATGACG AGAGAGAACA AACTCTGAAC CAGCTTCTGA CTGAAATGGA TGGATTTGAG GGTAACACCG GAATTATTGT TGTTGCCGCC ACCAATCGGG CTGATATCCT CGACGCTGCT CTGCTTCGAC CTGGACGATT TGATCGTCAG GTTACCGTGG ATGTTCCCGA CGTCAGAGGT CGGAGGGAAA TTCTCAAGGT TCATGCTGGA AACAAGAAGT TCGATCCCGA TGTCTCCCTG GACATCATTG CCATGAGGAC GCCTGGATTC AGCGGTGCCG ATCTTGCCAA TCTTTTGAAC GAGGCTGCCA TCCTCACGGG AAGGAGGGCA AAGACTGCCA TCTCTGCAAA GGAGATTGAC GACTCCATTG ACAGGATCGT CGCAGGAATG GAGGGAACTG TCATGACCGA TGGCAAGAGC AAGAGTCTGG TTGCTTACCA TGAAGTCGGA CACGCTGTTT GTGGAACTTT GACCCCGGGA CATGACGCCG TACAAAAGGT TACTCTCATC CCTAGAGGCC AAGCTCGTGG TCTCACATGG TTCATTCCTG GTGAAGATCC TTCTTTGATC TCCAAGCAAC AGATCTTTGC ACGTATTGTT GGTGCTTTGG GCGGTAGAGC TGCCGAGGAG ATCATCTTTG GAGATGCTGA GGTGACAACA GGTGCATCCA GCGATTTGCA GCAAGTGACT TCCATGGCTA AGCAGATGGT CACTGTTTTC GGTATGTCCG AGATCGGACC TTGGGCTCTG ATGGATCCAT CAGCCCAAGG AGGAGATGTT ATCATGAGAA TGATGGCTAG GAACTCCATG TCTGAGAGAT TGGCCGAGGA TATCGACAGA GCAGTGAAGG CCATTTCTGA CAAGGCTTAC ATAGTAGCCT TGGAACACAT CCGCCAGAAC AGAGCTGCCA TTGACAAGAT CGTTGAGGTT TTGGTCGAGA AGGAAACTTT GAGTGGGGAG GAGTTCAGGG CAATCTTGTC CGAGTTCACT GAAATCCCAG CTGAGAACCG TGTCGCTGCC GAACAAGCCG TGCCAGTGTA GAGGAATATG TTGATATGGT TGAATCTCAG ATAACTTAAA GAAATGTTGT ATATCAAGTA CAAAGTAGGT GGTTATAAAG CCTCGCATGT ATACTACTTG CTGCTTGTGC ATTTCTGGAG TTTGCAGCAA GTCGCACTCT TCCCCTTTCT GGAGCTCTTG AGGTTGACTG GACTGGCTAA TGTTAGCTCT TTTGACGAAG GATGTAAACT ACCGTGTGGT CTCGCATATT CAGATGCTGT CTTCGACCAC ATCAATCAAA ATTAGTCACA GTTAGAGAAA AGTCAAATTT TCCTACGGAG CGACAGCACG ACCTGTCTGT CCGGTAGGTG TCCCTGTAAT TCTATGACGT AATGATCATC TCATCGACTA TTGTCGTGTG AACATCCG |
CDS |
| >Mp4g19200.1 ATGGCTGCGG TGACGGGCAT GGCGGGGCAG CTGACACCGA CGTTCGTTGC TTCCGATGGA GCGAATTCCC TGCGCAAGGG GCTCGCAGGG CAGAAGCTGT CGCTGTTTCT TTGTCCTTCG GTGAAGCAGT CGACGAGAGC TCGCAAGGTG CAGGCTTCTG CGCGCCCGGC CGGTGAGGAA TCGAGTGTTA ATGAGGGTAA GAGAGGTTTT TTGAAGGGTG TTCTTGGTGC TGCTGGTGTC GGTCTTCCCG CGCTCGCGGC TCAGAGCGCC ATGGCTGCCG ATGAGCAGGG AGTTGCTTCT TCCAGAATGT CTTACTCTAG ATTTTTGGAG TACTTGGAAA TGGACCGTGT GAAGAAGGTT GATTTGTATG AAAACGGAAC CATCGCCATT GTAGAAGCTG TGTCGCCTGA GTTGGGGTTC AGGGTTCAGA GAGTACGAGT GCAGCTGCCG GGTCTTAGCC AGGAGTTGCT TCAGAAATTC AGGGCCAAGA ATATAGATTT TGCCGCTCAC AACCCACAGG AAGATTCTGG TTCAGTTCTC TTGAACCTCA TCGGCAACCT TGCCTTCCCC CTTCTCCTTG TCGGAGGTCT TTTCTTCCTG TCCAGGAGGT CACAGGGAGG CTTGGGAGGT CCAGGAGGAC CCGGCAACCC TTTGGCATTC GGAAAGTCTA AGGCTAAGTT CCAGATGGAG CCCAACACAG GAGTCACTTT CGACGATGTC GCAGGGGTAG ACGAAGCCAA ACAAGACTTT ATGGAGGTTG TCGAATTTTT GAAGAGACCA GAAAGGTTCA CCGCTGTCGG AGCTAGGATT CCCAAGGGTG TTTTGCTGGT TGGACCACCC GGAACAGGAA AGACTCTTCT CGCCAAGGCC ATTGCTGGCG AAGCTGGAGT TCCATTTTTC TCAATTTCTG GTTCTGAGTT CGTGGAAATG TTTGTTGGTG TGGGAGCATC ACGAGTGAGG GATCTCTTCA AGAAGGCCAA GGAAAATGCT CCTTGCATTG TGTTCGTGGA TGAGATTGAT GCCGTCGGAA GGCAGAGGGG TACCGGTATC GGTGGAGGCA ATGACGAGAG AGAACAAACT CTGAACCAGC TTCTGACTGA AATGGATGGA TTTGAGGGTA ACACCGGAAT TATTGTTGTT GCCGCCACCA ATCGGGCTGA TATCCTCGAC GCTGCTCTGC TTCGACCTGG ACGATTTGAT CGTCAGGTTA CCGTGGATGT TCCCGACGTC AGAGGTCGGA GGGAAATTCT CAAGGTTCAT GCTGGAAACA AGAAGTTCGA TCCCGATGTC TCCCTGGACA TCATTGCCAT GAGGACGCCT GGATTCAGCG GTGCCGATCT TGCCAATCTT TTGAACGAGG CTGCCATCCT CACGGGAAGG AGGGCAAAGA CTGCCATCTC TGCAAAGGAG ATTGACGACT CCATTGACAG GATCGTCGCA GGAATGGAGG GAACTGTCAT GACCGATGGC AAGAGCAAGA GTCTGGTTGC TTACCATGAA GTCGGACACG CTGTTTGTGG AACTTTGACC CCGGGACATG ACGCCGTACA AAAGGTTACT CTCATCCCTA GAGGCCAAGC TCGTGGTCTC ACATGGTTCA TTCCTGGTGA AGATCCTTCT TTGATCTCCA AGCAACAGAT CTTTGCACGT ATTGTTGGTG CTTTGGGCGG TAGAGCTGCC GAGGAGATCA TCTTTGGAGA TGCTGAGGTG ACAACAGGTG CATCCAGCGA TTTGCAGCAA GTGACTTCCA TGGCTAAGCA GATGGTCACT GTTTTCGGTA TGTCCGAGAT CGGACCTTGG GCTCTGATGG ATCCATCAGC CCAAGGAGGA GATGTTATCA TGAGAATGAT GGCTAGGAAC TCCATGTCTG AGAGATTGGC CGAGGATATC GACAGAGCAG TGAAGGCCAT TTCTGACAAG GCTTACATAG TAGCCTTGGA ACACATCCGC CAGAACAGAG CTGCCATTGA CAAGATCGTT GAGGTTTTGG TCGAGAAGGA AACTTTGAGT GGGGAGGAGT TCAGGGCAAT CTTGTCCGAG TTCACTGAAA TCCCAGCTGA GAACCGTGTC GCTGCCGAAC AAGCCGTGCC AGTGTAG |
Protein |
| >Mp4g19200.1 MAAVTGMAGQ LTPTFVASDG ANSLRKGLAG QKLSLFLCPS VKQSTRARKV QASARPAGEE SSVNEGKRGF LKGVLGAAGV GLPALAAQSA MAADEQGVAS SRMSYSRFLE YLEMDRVKKV DLYENGTIAI VEAVSPELGF RVQRVRVQLP GLSQELLQKF RAKNIDFAAH NPQEDSGSVL LNLIGNLAFP LLLVGGLFFL SRRSQGGLGG PGGPGNPLAF GKSKAKFQME PNTGVTFDDV AGVDEAKQDF MEVVEFLKRP ERFTAVGARI PKGVLLVGPP GTGKTLLAKA IAGEAGVPFF SISGSEFVEM FVGVGASRVR DLFKKAKENA PCIVFVDEID AVGRQRGTGI GGGNDEREQT LNQLLTEMDG FEGNTGIIVV AATNRADILD AALLRPGRFD RQVTVDVPDV RGRREILKVH AGNKKFDPDV SLDIIAMRTP GFSGADLANL LNEAAILTGR RAKTAISAKE IDDSIDRIVA GMEGTVMTDG KSKSLVAYHE VGHAVCGTLT PGHDAVQKVT LIPRGQARGL TWFIPGEDPS LISKQQIFAR IVGALGGRAA EEIIFGDAEV TTGASSDLQQ VTSMAKQMVT VFGMSEIGPW ALMDPSAQGG DVIMRMMARN SMSERLAEDI DRAVKAISDK AYIVALEHIR QNRAAIDKIV EVLVEKETLS GEEFRAILSE FTEIPAENRV AAEQAVPV |