Mp4g19540



Description

Annotation

Database ID Description
ProSitePatterns PS00022 EGF-like domain signature 1.
Gene3D G3DSA:2.10.25.10 Laminin
ProSitePatterns PS01186 EGF-like domain signature 2.
ProSiteProfiles PS50026 EGF-like domain profile.
PANTHER PTHR11062 EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
Pfam PF03016 Exostosin family
KOG KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1; [GMW]
KOG KOG1225 Teneurin-1 and related extracellular matrix proteins, contain EGF-like repeats; N-term missing; C-term missing; [TW]
MapolyID Mapoly0126s0040 -
GO GO:0016757 glycosyltransferase activity
GO GO:0006486 protein glycosylation

Nomenclature

Gene symbol Product Transcript ID Status
MpGT47.12 Cell wall related protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

M. polymorpha ExAD ortholog identified and cloned into the study's cDNA library.

1 core 0 peripheral

Kang HS, Tong X, Mariette A, Leong M, Beahan C, Flores-Sandoval E, Pedersen GB, Rautengarten C, Bowman JL, Ebert B, Bacic A, Doblin MS, Persson S, Lampugnani ER. (2025) · The Plant journal : for cell and molecular biology  research experimental subject
M. polymorpha ExAD ortholog identified and cloned into the study's cDNA library.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g19540.1 chr4:26341891..26352268 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp4g19540.2 chr4:26341891..26352268 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g19540 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g19540 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.