Mp4g21180
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:3.90.25.10 | - |
| Gene3D | G3DSA:3.40.50.720 | - |
| PANTHER | PTHR43574 | EPIMERASE-RELATED |
| Pfam | PF01370 | NAD dependent epimerase/dehydratase family |
| CDD | cd05273 | GME-like_SDR_e |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains |
| KEGG | K10046 | GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-] |
| KOG | KOG1429 | dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase; [GM] |
| MapolyID | Mapoly0101s0064 | - |
| GO | GO:0051287 | NAD binding |
| GO | GO:0047918 | GDP-mannose 3,5-epimerase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpDFR-like12 | Secondary metabolism enzyme | Provisional |
This is a provisional entry. If you want to update the entry, please contact the administrator.
Associated Literature (AI-based literature mining, Beta-version)
GDP-mannose-3',5'-epimerase (GME); ascorbate pathway.
1 core 0 peripheral
Ishida, T., et al. (2024)
· The Plant Journal research experimental subject
GDP-mannose-3',5'-epimerase (GME); ascorbate pathway.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g21180 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g21180.1 CACAGCGAAA AGACTTGACA TTCACTGGAA TCACTCATTC ACGCTCACTT GCGTCGGGAC TTGCTTCCGA AGGCTATAAA AGCCTCCGAG GTATCAGTTC CCAGGCTGTG AGGCGGAAAT CGAGTCGAGC AGACAGCCAG AGCGAGTGAG AGAGTGAGTG GATTTTCATT CAGGCTGTGG GAGAATAAGA GATCGTCTGT GTGAGATTAG AGAAGGGGGA AGGGAAGGGG CAGGCGAGGA AATATGGCTT CGAACGGAGT GAATGGAACC ACCAATGGGC TGTACGAGGC CACAAACTTG GACAAGGAGC TGTACTGGCC CGAGAAGAAG TTGCGAATTT CTGTGACAGG TGCCGGGGGT TTCATCGCCT CGCACATTGC CAGGAGGCTC AAGAGCGAGG GGCATTACGT GATTGCTTCC GATTGGAAGA GGAACGAGCA CATGACCGAG GATATGTTCT GTGATGAGTT CCATCTGGTC GACCTCAGGG TCATGGAAAA TTGTTTGAAG GTCACACAGG ATGTGGAACA TGTGTTCAAC TTGGCCGCCG ACATGGGAGG CATGGGATTC ATTCAGTCCA ACCACTCGGT CATCATGTAC AACAATACCA TGATCAGCTT CAACATGCTC GAAGCCGCCC GCATCAACGG TGTTAAGAGG TGCCCCTCTC GCTCTCTCTT ATTCCTCCCC ACGATTTTTC ATGGTCTTTC TATCAAGATT GTCGTCTGTA CTTGCCTGCA CCAGCATGGT ATTACCACTC TTCAAACAGT CGGTCGATTA GCCAGCCTCC TGTCCCGATG TCGGCTCGAC AGGTCTTGGC ATGGCGGCCG GCAATTTCCC TCATCTCGGT TTCTCTTATA CGAAGAGGAT ACGGTTTGAC TGGAATGGCC CCTTTGCACG TTGCCTGCAT GCATGGCAGA TTCGTGAACG GTACTGCGTG CCTGCAGAAA ATCTTGTTCC CTAGAACTGA ATATTCTCTC ATTTTTCGTA CACTGCTACG ATGTATTCAC TAGGTCATTG TCCCCATCTG CACGCCCTGT GAGTGTATCC CCGCAGTCTT GTTCTTGATT ATGGCAAGGT GCCTCTCAGT TGTAAGTAGT GTTCGGGGAC AATCTTGTAC CAAAATTGCA GTTCACCTCT GTCTCAGATT TGGGCCGCAC AATCCATCTG TCATTTATTT TGTCGGTGGT TGACCCTGGC CGACTTGGGG TGTTTCCGGA GACTCAAATC TCCTGGAGCC CTTTGAAGTC CAGTCACGTC AATGAAATGT CAAATCTGGA CCTTCAGATC TGTCTTTTCC TCCTCGAGAG AATCAGCTCC TTTATAATAA GTGAAGATTT TTGTTAACGA CTTGTAATTG GAACGGTAGT TCCACCGCGC CGTCACAGAG TGCCAAGTGA TGATTCTGAG TATGAAATCT TGGGTAGCAG TCGAATTCTA ATTGAGAAAC CTAGGGTTGT GTTATTAAGC AGTAAGCGAT CCCTTGCACA GAGTGCCTCC TCAGGGTCTG CCGATCGACT GTCTATCTGC TCACTACTGT CGATAGACTT GTAACATATG TCGGTGTTTG ATTACAGATT CTTCTACGCA TCAAGCGCAT GCATTTACCC AGAGTACAAG CAGTTGGACG TCGACTGTGT CAGCCTGAAG GAAGCCGACG CCTGGCCCGC TGAGGTACAC CCCCCTGTGG ACATACCCCT GATAGTATGG CATTCTGTCG ATGCCAGAAA ACTTAAGCGT CGAAGTGAAA TGACAACGAA GTGAGCTCAT CGGATGTAGT TCAAATGCGG AGTATGTAGT GAGTCTTAAT GATTGCGGTA CAAATACAGC CGTCAGAGTC GGATTATGAG CTCATATAGT GAGGAATGGT GTGAAGTGTC GGGCAATTTC TGTTATGAAT TTGGATCAAA ATTGCATGCT CGAACTGCCT TTACTAATGT CAACGACTTC TGTTGGGCCT TCCCCTGTGC AGCCACAAGA TGCCTACGGT TTGGAAAAGC TTGCGACCGA AGAGCTGTGC AAGCATTACA CCAAGGACTT CGGAATGCAG TGTAGAATTG GACGATTCCA CAACATCTAC GGCCCCTACG GAACCTGGAA GGGTGAGGCG CAAATTTTAT CAAATTTCAC TTCTTGCGCG ATGAATGCTC TTGCATTTGA GTCAACTCGG TCAGGTGCAG AGTGTTCTAA CCAGAGTGGC TGATTGTTCG ATATATCAGG AGGACGTGAG AAAGCCCCTG CTGCTTTCTG CAGAAAGGCG ATCACCTCCA CCGAGAAGTT CGAAATGTGG GGAGATGGCA AGCAGACCAG ATCATTCACA TTCATTGACG AATGTGTCGA GGGTGTCCTC CGGTGAGAGC CGACGAAATT CCCTCAGATT GTGAAGTTTT GATTTGAGAC ATGTACCGAA TGAATTGAAA TCTTAACTGA ATACACATCA TGTTACTCAT CTGGTGATAT ATGCCAATGC AGATTGACCA AGTCAGAGTA CTCTGAGCCA GTAAACATCG GAAGTGACGA GATGGTGAGC ATGAACGAGA TGGCAGAGAT CGTGCTGAGC TTCGAGGGTA AGGACTTGCC GATCGAACAC ATCCCCGGAC CCGAGGGAGT GAGGGGAAGG AACTCCGACA ACACTTTGAT CAAGGAGAAA TTAGGATGGT CTCCGACAAT GAGGCTGAAG GTAAACAGCA CAGCACCATC ACCCAAAGCA CCGTCGGTTA AATAACGGAA TCTTCTGGCA TTCATGCCCA CTGCACACTG TAACAATTTT GACTTTCCCC ATGCTTTCTT AATTGTGCCA CACGTGCATG CACTGACCAC CCGACCGACG GGTTGACGTT TGTGCTGAAA CAGGACGGTC TTAGAATCAC ATACTACTGG ATCTTAGAGC AGGTCGAGAA GGAGAAGGCT AAGGGTGTGA CTATGGACAC GTACGCCACA TCGAAGGTCG TGGGCACGCA GGCACCCGTA GCGTTGGGCT CCCTGCGCGC AGCCGACGGC AAGGAGTGAG GAGGAGCCGT GATTTTGACA CTATTGCCGT ATGGGTGGGG GTGCCCTGAG ATCTGAATTG GAAGGACGGA AACGATTCCT CTGTCCTCTG AGGCTCCGAG CGCTGGATGC ATACTGCAGC TACTCTGGTT AGAGATTATG AGAGTCACAG TGAGCTCCAG CGCCGGATTT TCCACCGCAC ACGATAACGT TGTTAGTGCT TCGGCTGCAC AGTACATAAA TGTGAATGGA GCCTAGCGGC TCATAATCGA AAGCAACGAG GAGATCTACC TGGTTCCTCC TCTACCTTAA AACAAAAGCC AACCAGGTCA TAACCCTTGA GCGAAAGGGT TTCACATAAT TCGGCAGCTG CACTGGAGAT GCAAGTAGGA AACCAACACT CGGTTATAGG ACTATCTAGA ACGTCGGGAT CTAGTCTCCG TTCAAATGTG AAGATCTACA AAGTTCTAAT ACAAGTTCTT ATACATAGCA GCCATATTTT TGACC |
mRNA UTR + CDS |
| >Mp4g21180.1 CACAGCGAAA AGACTTGACA TTCACTGGAA TCACTCATTC ACGCTCACTT GCGTCGGGAC TTGCTTCCGA AGGCTATAAA AGCCTCCGAG GTATCAGTTC CCAGGCTGTG AGGCGGAAAT CGAGTCGAGC AGACAGCCAG AGCGAGTGAG AGAGTGAGTG GATTTTCATT CAGGCTGTGG GAGAATAAGA GATCGTCTGT GTGAGATTAG AGAAGGGGGA AGGGAAGGGG CAGGCGAGGA AATATGGCTT CGAACGGAGT GAATGGAACC ACCAATGGGC TGTACGAGGC CACAAACTTG GACAAGGAGC TGTACTGGCC CGAGAAGAAG TTGCGAATTT CTGTGACAGG TGCCGGGGGT TTCATCGCCT CGCACATTGC CAGGAGGCTC AAGAGCGAGG GGCATTACGT GATTGCTTCC GATTGGAAGA GGAACGAGCA CATGACCGAG GATATGTTCT GTGATGAGTT CCATCTGGTC GACCTCAGGG TCATGGAAAA TTGTTTGAAG GTCACACAGG ATGTGGAACA TGTGTTCAAC TTGGCCGCCG ACATGGGAGG CATGGGATTC ATTCAGTCCA ACCACTCGGT CATCATGTAC AACAATACCA TGATCAGCTT CAACATGCTC GAAGCCGCCC GCATCAACGG TGTTAAGAGA TTCTTCTACG CATCAAGCGC ATGCATTTAC CCAGAGTACA AGCAGTTGGA CGTCGACTGT GTCAGCCTGA AGGAAGCCGA CGCCTGGCCC GCTGAGCCAC AAGATGCCTA CGGTTTGGAA AAGCTTGCGA CCGAAGAGCT GTGCAAGCAT TACACCAAGG ACTTCGGAAT GCAGTGTAGA ATTGGACGAT TCCACAACAT CTACGGCCCC TACGGAACCT GGAAGGGAGG ACGTGAGAAA GCCCCTGCTG CTTTCTGCAG AAAGGCGATC ACCTCCACCG AGAAGTTCGA AATGTGGGGA GATGGCAAGC AGACCAGATC ATTCACATTC ATTGACGAAT GTGTCGAGGG TGTCCTCCGA TTGACCAAGT CAGAGTACTC TGAGCCAGTA AACATCGGAA GTGACGAGAT GGTGAGCATG AACGAGATGG CAGAGATCGT GCTGAGCTTC GAGGGTAAGG ACTTGCCGAT CGAACACATC CCCGGACCCG AGGGAGTGAG GGGAAGGAAC TCCGACAACA CTTTGATCAA GGAGAAATTA GGATGGTCTC CGACAATGAG GCTGAAGGAC GGTCTTAGAA TCACATACTA CTGGATCTTA GAGCAGGTCG AGAAGGAGAA GGCTAAGGGT GTGACTATGG ACACGTACGC CACATCGAAG GTCGTGGGCA CGCAGGCACC CGTAGCGTTG GGCTCCCTGC GCGCAGCCGA CGGCAAGGAG TGAGGAGGAG CCGTGATTTT GACACTATTG CCGTATGGGT GGGGGTGCCC TGAGATCTGA ATTGGAAGGA CGGAAACGAT TCCTCTGTCC TCTGAGGCTC CGAGCGCTGG ATGCATACTG CAGCTACTCT GGTTAGAGAT TATGAGAGTC ACAGTGAGCT CCAGCGCCGG ATTTTCCACC GCACACGATA ACGTTGTTAG TGCTTCGGCT GCACAGTACA TAAATGTGAA TGGAGCCTAG CGGCTCATAA TCGAAAGCAA CGAGGAGATC TACCTGGTTC CTCCTCTACC TTAAAACAAA AGCCAACCAG GTCATAACCC TTGAGCGAAA GGGTTTCACA TAATTCGGCA GCTGCACTGG AGATGCAAGT AGGAAACCAA CACTCGGTTA TAGGACTATC TAGAACGTCG GGATCTAGTC TCCGTTCAAA TGTGAAGATC TACAAAGTTC TAATACAAGT TCTTATACAT AGCAGCCATA TTTTTGACC |
CDS |
| >Mp4g21180.1 ATGGCTTCGA ACGGAGTGAA TGGAACCACC AATGGGCTGT ACGAGGCCAC AAACTTGGAC AAGGAGCTGT ACTGGCCCGA GAAGAAGTTG CGAATTTCTG TGACAGGTGC CGGGGGTTTC ATCGCCTCGC ACATTGCCAG GAGGCTCAAG AGCGAGGGGC ATTACGTGAT TGCTTCCGAT TGGAAGAGGA ACGAGCACAT GACCGAGGAT ATGTTCTGTG ATGAGTTCCA TCTGGTCGAC CTCAGGGTCA TGGAAAATTG TTTGAAGGTC ACACAGGATG TGGAACATGT GTTCAACTTG GCCGCCGACA TGGGAGGCAT GGGATTCATT CAGTCCAACC ACTCGGTCAT CATGTACAAC AATACCATGA TCAGCTTCAA CATGCTCGAA GCCGCCCGCA TCAACGGTGT TAAGAGATTC TTCTACGCAT CAAGCGCATG CATTTACCCA GAGTACAAGC AGTTGGACGT CGACTGTGTC AGCCTGAAGG AAGCCGACGC CTGGCCCGCT GAGCCACAAG ATGCCTACGG TTTGGAAAAG CTTGCGACCG AAGAGCTGTG CAAGCATTAC ACCAAGGACT TCGGAATGCA GTGTAGAATT GGACGATTCC ACAACATCTA CGGCCCCTAC GGAACCTGGA AGGGAGGACG TGAGAAAGCC CCTGCTGCTT TCTGCAGAAA GGCGATCACC TCCACCGAGA AGTTCGAAAT GTGGGGAGAT GGCAAGCAGA CCAGATCATT CACATTCATT GACGAATGTG TCGAGGGTGT CCTCCGATTG ACCAAGTCAG AGTACTCTGA GCCAGTAAAC ATCGGAAGTG ACGAGATGGT GAGCATGAAC GAGATGGCAG AGATCGTGCT GAGCTTCGAG GGTAAGGACT TGCCGATCGA ACACATCCCC GGACCCGAGG GAGTGAGGGG AAGGAACTCC GACAACACTT TGATCAAGGA GAAATTAGGA TGGTCTCCGA CAATGAGGCT GAAGGACGGT CTTAGAATCA CATACTACTG GATCTTAGAG CAGGTCGAGA AGGAGAAGGC TAAGGGTGTG ACTATGGACA CGTACGCCAC ATCGAAGGTC GTGGGCACGC AGGCACCCGT AGCGTTGGGC TCCCTGCGCG CAGCCGACGG CAAGGAGTGA |
Protein |
| >Mp4g21180.1 MASNGVNGTT NGLYEATNLD KELYWPEKKL RISVTGAGGF IASHIARRLK SEGHYVIASD WKRNEHMTED MFCDEFHLVD LRVMENCLKV TQDVEHVFNL AADMGGMGFI QSNHSVIMYN NTMISFNMLE AARINGVKRF FYASSACIYP EYKQLDVDCV SLKEADAWPA EPQDAYGLEK LATEELCKHY TKDFGMQCRI GRFHNIYGPY GTWKGGREKA PAAFCRKAIT STEKFEMWGD GKQTRSFTFI DECVEGVLRL TKSEYSEPVN IGSDEMVSMN EMAEIVLSFE GKDLPIEHIP GPEGVRGRNS DNTLIKEKLG WSPTMRLKDG LRITYYWILE QVEKEKAKGV TMDTYATSKV VGTQAPVALG SLRAADGKE |