Mp4g21400



Description

Annotation

Database ID Description
SMART SM00220 serkin_6
FunFam G3DSA:3.30.200.20:FF:000305 PTI1-like tyrosine-protein kinase At3g15890
FunFam G3DSA:1.10.510.10:FF:000317 PTI1-like tyrosine-protein kinase At3g15890
Pfam PF07714 Protein tyrosine and serine/threonine kinase
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
ProSiteProfiles PS50011 Protein kinase domain profile.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
PANTHER PTHR47989 OS01G0750732 PROTEIN
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0090s0081 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_RLCK-XVb Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp4g21400.1 chr4:28616716..28621197 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g21400 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g21400 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.