Mp4g22430



Description

Annotation

Database ID Description
SMART SM00717 sant
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
CDD cd00167 SANT
ProSiteProfiles PS50158 Zinc finger CCHC-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR44191 TRANSCRIPTION FACTOR KUA1
Pfam PF00249 Myb-like DNA-binding domain
ProSiteProfiles PS50090 Myb-like domain profile.
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
Gene3D G3DSA:1.10.10.60 -
ProSiteProfiles PS51293 SANT domain profile.
FunFam G3DSA:1.10.10.60:FF:000009 transcription factor MYB1R1
SUPERFAMILY SSF46689 Homeodomain-like
KOG KOG0724 Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; N-term missing; C-term missing; [O]
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
MapolyID Mapoly0020s0013 -
GO GO:0009723 response to ethylene
GO GO:0008270 zinc ion binding
GO GO:0009739 response to gibberellin
GO GO:0003677 DNA binding
GO GO:0003676 nucleic acid binding

Nomenclature

Gene symbol Product Transcript ID Status
Mp1R-MYB7 transcription factor, MYB Published

Associated Literature (AI-based literature mining, Beta-version)

M. polymorpha 1R-MYB TF assayed by ampDAP-seq; yielded TFBM GATNA.

1 core 0 peripheral

Zenker S, Wulf D, Meierhenrich A, Viehoever P, Becker S, Eisenhut M, Stracke R, Weisshaar B, Brautigam A. (2025) · Plant Physiology  research experimental subject
M. polymorpha 1R-MYB TF assayed by ampDAP-seq; yielded TFBM GATNA.

Transcript models

Transcript ID Location Sequences Extract region
Mp4g22430.1 chr4:30215328..30219545 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp4g22430 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp4g22430 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.