Mp4g22990
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS51401 | CHORD domain profile. |
| Pfam | PF04968 | CHORD |
| Gene3D | G3DSA:4.10.1130.20 | - |
| FunFam | G3DSA:4.10.1130.20:FF:000003 | Cysteine and histidine-rich domain-containing protein RAR1 |
| PANTHER | PTHR47895 | CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 |
| KEGG | K13458 | disease resistance protein |
| KOG | KOG1667 | Zn2+-binding protein Melusin/RAR1, contains CHORD domain; C-term missing; [R] |
| MapolyID | Mapoly0020s0061 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpRAR1 | Disease resistance | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g22990 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g22990.1 GTTGGAAGGC GTAAGCACGA CAACCATGTA AAGTACGCGA TGGACTGTAA CCACATCTGA ACCCCCGAGT AACGAACGAA TCGAGGAAGG TGCTAAACCC TGAAGCCCTC CCTCCCTCCC TCCCTCCCTG ACTCCCCCAA CGAAGCTGAC GGACCGACGA TCCAATTTCT GGAGTTTTTT GTGCTCAGGC AGGTGGACCG AGAACTTTGA TTCGTGGCGA CACAAATTCA TTCCCGTTTT TTCAGTGGAG TAGGCAGGTC GGTTGATCGA GGAGTTCGGA TTCCAGAAGT TTGTTTTAAG GAGGGGCTTC GATTATGACG ACTGTCACCA AGCAAAAATG CCAGAGAATT GGCTGCGATG TGATGTTTAC GGCCGATGAT AATCCTGAAG GTTCCTGCCG GTACCACCCT GGGGTAAGTT GTGTGGACTA GCTGGCGCCT GTAGGTTTAT TACTCCCTAC ATTGCTCCGA GCCTTTGTGG CCGCTGAAAG CGTTTAACCC GAACGATCTC CGTGGATCCT TGATTTGTCT TTTATTTTTG TGCAAAGGTG TTCTTCACTT GTACACTGGG TATTCTAACC CTAGATAAGA ATTAGGTTGA AGACATTGCC ATGAATAAGG CCAGAAATCA TTTCCATGGC ACTGAATCAG TCTGCATCTG AACCAAATGA CAATTCTACC CTCGTCAAGT ATTCGAATTC TCGCATAGTG TCGAGAGAGG TTTTGCTTAT GCCAAGATAA CAGGCTTCAC AAGGATCGGT CATTGTCACT TTCTGAGATT TTGTGTAACT ATTGAACTTA TATGCATACT TTTAATCAGC AATCCATCCC CGTTCACGCA CAGTTTTTGC TGAAATAATA CCAGAATAGT CGGGTGTTTT TCCCAGTCTA ATTCTTTGGT TTCAGCTGTA GAAGCTCGTG TGAAGAGTTA TTAAGCGGTT ACTCTGTGAT TATAATCTGA AATTCTAAGC ATGGCAAATG CCGCTGATCA GTAGTCCTTG TTCTGATCGA TGAGTTCTTC CTTGTATACA TGGACATGGG CGATACCTCT CCGTCCGCTT CTTGATTGTG GCACTGAAAC GCAGCCGGTA TGTCTCAGTT ATCCATGCCA TTGATCATTC AGTTTATTTT GAAGATCCTC TTTGCCTTTG AGGGTTTGTC ATGTCCTCGT CCTTGTGTTC ACAAATTTTT GACAGTTTGT TGTGTAGAAG CATTGTTGCA TCTTGAATTC CTTAGATTTG CAGCGAGAAT CACGTCAGAT ATAATTCTCG TCAGAATTGC CAGTCTTACT TGCATACGTT GTCACAGCCC TTATTTCACG ACGGAGGGAA AGAATGGAGT TGTTGCAAGC AACGTAGTCA CGACTTCAGT CTCTTCTTAG AGCTTCCAGG GTAAGAAATT CACACCGATG TATGTCTTGG ATAAGTCATT CGACTTAATG TTCACAATTG TTCAGGACAC GTACATTGAT GGTTTCAGTA CCCCATTTGA AAGTAGAGGG GATGTACGAG TGCGATTGAA GAAAAATAAA GGTAGACAGA TAGACCATGC GCTAAATGTT TACAACAAAA GGTGTGCACA TAACATGAGT CAACGGTCTG TGTGCTAGTG GTTCCGTTTG TTTGATTTTG CAGATGCAAA ACTGGTCAAC ATACTTCTGA GAAACCTTTA CCGAAGATAG CTCCAAGTCC GAACAAGCCA GTCCCAGTCA ATGTAACCAG CGACGCAGCT GCAAGCGCCA ATTGTAATCG GTGCAGACAG GGTTTCTACT GCTCTGATCA TGGTCAGTGT CCTATCCTAA TCGGAGAAGC TCTATGAGCC TGGCCGCGTC TATATTTAGG AGCTGGCAAA AGAATATATG ATATTATGAA GAACTATGGA ATGTCACCTC CTGTTTTTCG CTAGCGAGAA TGAAGTTGTA ACCTGATAGT TGAAGTCGTT GGTTGTGTAA TATGCAGGCT CAAGACTTCC AGTAAGAGTT TCAGCTCCTG CTCCAAAGGT GACTCCTCTT GCAGCTGTTG AAAAGAAAGT AAACGTACCT GCTCCTCGCA AAATCGTGGA CCTGAACGCA AAACAGACCT GCAAAAACAA AGGCTGTGGT AAAGAGTTCA CAGAAAAGGA GAACACAGAT ACTGCATGCA GTTTTCATCC AGGTCCCGCT ATATTTCACG ACAGATCGAA AGGGGTAAGC AACTGCAGCC TGTATTTCTG TCCTATCATT TTCTGGAGTT TATATTGCGA AAGATAGACG ACAGGCCAAC ATGTCTTGAT AGCTGGATCT GTTTTGGGAG GCACTAAAAT CTTTCAGTCT GTGTGCTTTG ACAGTGGAAA TGCTGTGATA CTCACGTGAA GGAATTTGAG GAATTTTTGG AAATCCCCCC GTGTGCAAAG GGATGGCACA ATGCAAATCC CGACGAAGTT TAGGACTTAC AAGGTTGTTA GGAGTTCCGG TGTGCTGAAA GTCGACGAGT CCTGCCCAGC TCGCCAGCCC ACTTTCTTCG GTCGAGCCGA GAAGAGTTTA CGTGAAGCTG TCACATCCCT CGGACTTTTA CCTGTCCCTC CTGATCAGGG ATCAGGCATT AATTATAGAT CTAGTGTAGG AGTATTGGGC CGCTTGTGGA GCTTTCGAAC TGCGAAGAAT GATCTTTTCT CCAAGGCCAA CTTCATTTTA AGAATCACAA ATGTATGCTC AAAAGATTGT TTGTCGAGCT GTTCCGAGCG TTGAAAGCCT CGCAGAGGTT TTAGAGTATT ACAGGAACAG ACAAACGTTT GAAGTTCGGA GCGCAACGGT CGGTGTCTCC AGGATTGTAA ACACTGGGGA TCTGAGCAAT TGTAATTGAA GATGTGGTGA CATATGGTTT TATG |
mRNA UTR + CDS |
| >Mp4g22990.1 GTTGGAAGGC GTAAGCACGA CAACCATGTA AAGTACGCGA TGGACTGTAA CCACATCTGA ACCCCCGAGT AACGAACGAA TCGAGGAAGG TGCTAAACCC TGAAGCCCTC CCTCCCTCCC TCCCTCCCTG ACTCCCCCAA CGAAGCTGAC GGACCGACGA TCCAATTTCT GGAGTTTTTT GTGCTCAGGC AGGTGGACCG AGAACTTTGA TTCGTGGCGA CACAAATTCA TTCCCGTTTT TTCAGTGGAG TAGGCAGGTC GGTTGATCGA GGAGTTCGGA TTCCAGAAGT TTGTTTTAAG GAGGGGCTTC GATTATGACG ACTGTCACCA AGCAAAAATG CCAGAGAATT GGCTGCGATG TGATGTTTAC GGCCGATGAT AATCCTGAAG GTTCCTGCCG GTACCACCCT GGGCCCTTAT TTCACGACGG AGGGAAAGAA TGGAGTTGTT GCAAGCAACG TAGTCACGAC TTCAGTCTCT TCTTAGAGCT TCCAGGATGC AAAACTGGTC AACATACTTC TGAGAAACCT TTACCGAAGA TAGCTCCAAG TCCGAACAAG CCAGTCCCAG TCAATGTAAC CAGCGACGCA GCTGCAAGCG CCAATTGTAA TCGGTGCAGA CAGGGTTTCT ACTGCTCTGA TCATGGCTCA AGACTTCCAG TAAGAGTTTC AGCTCCTGCT CCAAAGGTGA CTCCTCTTGC AGCTGTTGAA AAGAAAGTAA ACGTACCTGC TCCTCGCAAA ATCGTGGACC TGAACGCAAA ACAGACCTGC AAAAACAAAG GCTGTGGTAA AGAGTTCACA GAAAAGGAGA ACACAGATAC TGCATGCAGT TTTCATCCAG GTCCCGCTAT ATTTCACGAC AGATCGAAAG GGTGGAAATG CTGTGATACT CACGTGAAGG AATTTGAGGA ATTTTTGGAA ATCCCCCCGT GTGCAAAGGG ATGGCACAAT GCAAATCCCG ACGAAGTTTA GGACTTACAA GGTTGTTAGG AGTTCCGGTG TGCTGAAAGT CGACGAGTCC TGCCCAGCTC GCCAGCCCAC TTTCTTCGGT CGAGCCGAGA AGAGTTTACG TGAAGCTGTC ACATCCCTCG GACTTTTACC TGTCCCTCCT GATCAGGGAT CAGGCATTAA TTATAGATCT AGTGTAGGAG TATTGGGCCG CTTGTGGAGC TTTCGAACTG CGAAGAATGA TCTTTTCTCC AAGGCCAACT TCATTTTAAG AATCACAAAT GTATGCTCAA AAGATTGTTT GTCGAGCTGT TCCGAGCGTT GAAAGCCTCG CAGAGGTTTT AGAGTATTAC AGGAACAGAC AAACGTTTGA AGTTCGGAGC GCAACGGTCG GTGTCTCCAG GATTGTAAAC ACTGGGGATC TGAGCAATTG TAATTGAAGA TGTGGTGACA TATGGTTTTA TG |
CDS |
| >Mp4g22990.1 ATGACGACTG TCACCAAGCA AAAATGCCAG AGAATTGGCT GCGATGTGAT GTTTACGGCC GATGATAATC CTGAAGGTTC CTGCCGGTAC CACCCTGGGC CCTTATTTCA CGACGGAGGG AAAGAATGGA GTTGTTGCAA GCAACGTAGT CACGACTTCA GTCTCTTCTT AGAGCTTCCA GGATGCAAAA CTGGTCAACA TACTTCTGAG AAACCTTTAC CGAAGATAGC TCCAAGTCCG AACAAGCCAG TCCCAGTCAA TGTAACCAGC GACGCAGCTG CAAGCGCCAA TTGTAATCGG TGCAGACAGG GTTTCTACTG CTCTGATCAT GGCTCAAGAC TTCCAGTAAG AGTTTCAGCT CCTGCTCCAA AGGTGACTCC TCTTGCAGCT GTTGAAAAGA AAGTAAACGT ACCTGCTCCT CGCAAAATCG TGGACCTGAA CGCAAAACAG ACCTGCAAAA ACAAAGGCTG TGGTAAAGAG TTCACAGAAA AGGAGAACAC AGATACTGCA TGCAGTTTTC ATCCAGGTCC CGCTATATTT CACGACAGAT CGAAAGGGTG GAAATGCTGT GATACTCACG TGAAGGAATT TGAGGAATTT TTGGAAATCC CCCCGTGTGC AAAGGGATGG CACAATGCAA ATCCCGACGA AGTTTAG |
Protein |
| >Mp4g22990.1 MTTVTKQKCQ RIGCDVMFTA DDNPEGSCRY HPGPLFHDGG KEWSCCKQRS HDFSLFLELP GCKTGQHTSE KPLPKIAPSP NKPVPVNVTS DAAASANCNR CRQGFYCSDH GSRLPVRVSA PAPKVTPLAA VEKKVNVPAP RKIVDLNAKQ TCKNKGCGKE FTEKENTDTA CSFHPGPAIF HDRSKGWKCC DTHVKEFEEF LEIPPCAKGW HNANPDEV |
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g22990.2 GTTGGAAGGC GTAAGCACGA CAACCATGTA AAGTACGCGA TGGACTGTAA CCACATCTGA ACCCCCGAGT AACGAACGAA TCGAGGAAGG TGCTAAACCC TGAAGCCCTC CCTCCCTCCC TCCCTCCCTG ACTCCCCCAA CGAAGCTGAC GGACCGACGA TCCAATTTCT GGAGTTTTTT GTGCTCAGGC AGGTGGACCG AGAACTTTGA TTCGTGGCGA CACAAATTCA TTCCCGTTTT TTCAGTGGAG TAGGCAGGTC GGTTGATCGA GGAGTTCGGA TTCCAGAAGT TTGTTTTAAG GAGGGGCTTC GATTATGACG ACTGTCACCA AGCAAAAATG CCAGAGAATT GGCTGCGATG TGATGTTTAC GGCCGATGAT AATCCTGAAG GTTCCTGCCG GTACCACCCT GGGGTAAGTT GTGTGGACTA GCTGGCGCCT GTAGGTTTAT TACTCCCTAC ATTGCTCCGA GCCTTTGTGG CCGCTGAAAG CGTTTAACCC GAACGATCTC CGTGGATCCT TGATTTGTCT TTTATTTTTG TGCAAAGGTG TTCTTCACTT GTACACTGGG TATTCTAACC CTAGATAAGA ATTAGGTTGA AGACATTGCC ATGAATAAGG CCAGAAATCA TTTCCATGGC ACTGAATCAG TCTGCATCTG AACCAAATGA CAATTCTACC CTCGTCAAGT ATTCGAATTC TCGCATAGTG TCGAGAGAGG TTTTGCTTAT GCCAAGATAA CAGGCTTCAC AAGGATCGGT CATTGTCACT TTCTGAGATT TTGTGTAACT ATTGAACTTA TATGCATACT TTTAATCAGC AATCCATCCC CGTTCACGCA CAGTTTTTGC TGAAATAATA CCAGAATAGT CGGGTGTTTT TCCCAGTCTA ATTCTTTGGT TTCAGCTGTA GAAGCTCGTG TGAAGAGTTA TTAAGCGGTT ACTCTGTGAT TATAATCTGA AATTCTAAGC ATGGCAAATG CCGCTGATCA GTAGTCCTTG TTCTGATCGA TGAGTTCTTC CTTGTATACA TGGACATGGG CGATACCTCT CCGTCCGCTT CTTGATTGTG GCACTGAAAC GCAGCCGGTA TGTCTCAGTT ATCCATGCCA TTGATCATTC AGTTTATTTT GAAGATCCTC TTTGCCTTTG AGGGTTTGTC ATGTCCTCGT CCTTGTGTTC ACAAATTTTT GACAGTTTGT TGTGTAGAAG CATTGTTGCA TCTTGAATTC CTTAGATTTG CAGCGAGAAT CACGTCAGAT ATAATTCTCG TCAGAATTGC CAGTCTTACT TGCATACGTT GTCACAGCCC TTATTTCACG ACGGAGGGAA AGAATGGAGT TGTTGCAAGC AACGTAGTCA CGACTTCAGT CTCTTCTTAG AGCTTCCAGG GTAAGAAATT CACACCGATG TATGTCTTGG ATAAGTCATT CGACTTAATG TTCACAATTG TTCAGGACAC GTACATTGAT GGTTTCAGTA CCCCATTTGA AAGTAGAGGG GATGTACGAG TGCGATTGAA GAAAAATAAA GGTAGACAGA TAGACCATGC GCTAAATGTT TACAACAAAA GGTGTGCACA TAACATGAGT CAACGGTCTG TGTGCTAGTG GTTCCGTTTG TTTGATTTTG CAGATGCAAA ACTGGTCAAC ATACTTCTGA GAAACCTTTA CCGAAGATAG CTCCAAGTCC GAACAAGCCA GTCCCAGTCA ATGTAACCAG CGACGCAGCT GCAAGCGCCA ATTGTAATCG GTGCAGACAG GGTTTCTACT GCTCTGATCA TGGTCAGTGT CCTATCCTAA TCGGAGAAGC TCTATGAGCC TGGCCGCGTC TATATTTAGG AGCTGGCAAA AGAATATATG ATATTATGAA GAACTATGGA ATGTCACCTC CTGTTTTTCG CTAGCGAGAA TGAAGTTGTA ACCTGATAGT TGAAGTCGTT GGTTGTGTAA TATGCAGGCT CAAGACTTCC AGTAAGAGTT TCAGCTCCTG CTCCAAAGGT GACTCCTCTT GCAGCTGTTG AAAAGAAAGT AAACGTACCT GCTCCTCGCA AAATCGTGGA CCTGAACGCA AAACAGACCT GCAAAAACAA AGGCTGTGGT AAAGAGTTCA CAGAAAAGGA GAACACAGAT ACTGCATGCA GTTTTCATCC AGGTCCCGCT ATATTTCACG ACAGATCGAA AGGGGTAAGC AACTGCAGCC TGTATTTCTG TCCTATCATT TTCTGGAGTT TATATTGCGA AAGATAGACG ACAGGCCAAC ATGTCTTGAT AGCTGGATCT GTTTTGGGAG GCACTAAAAT CTTTCAGTCT GTGTGCTTTG ACAGTGGAAA TGCTGTGATA CTCACGTGAA GGAATTTGAG GAATTTTTGG AAATCCCCCC GTGTGCAAAG GGATGGCACA ATGCAAATCC CGACGAAGTT TAGGACTTAC AAGGTTGTTA GGAGTTCCGG TGTGCTGAAA GTCGACGAGT CCTGCCCAGC TCGCCAGCCC ACTTTCTTCG GTCGAGCCGA GAAGAGTTTA CGTGAAGCTG TCACATCCCT CGGACTTTTA CCTGTCCCTC CTGATCAGGG ATCAGGCATT AATTATAGAT CTAGTGTAGG AGTATTGGGC CGCTTGTGGA GCTTTCGAAC TGCGAAGAAT GATCTTTTCT CCAAGGCCAA CTTCATTTTA AGAATCACAA ATGTATGCTC AAAAGATTGT TTGTCGAGCT GTTCCGAGCG TTGAAAGCCT CGCAGAGGTT TTAGAGTATT ACAGGAACAG ACAAACGTTT GAAGTTCGGA GCGCAACGGT CGGTGTCTCC AGGATTGTAA ACACTGGGGA TCTGAGCAAT TGTAATTGAA GATGTGGTGA CATATGGTTT TATG |
mRNA UTR + CDS |
| >Mp4g22990.2 GTTGGAAGGC GTAAGCACGA CAACCATGTA AAGTACGCGA TGGACTGTAA CCACATCTGA ACCCCCGAGT AACGAACGAA TCGAGGAAGG TGCTAAACCC TGAAGCCCTC CCTCCCTCCC TCCCTCCCTG ACTCCCCCAA CGAAGCTGAC GGACCGACGA TCCAATTTCT GGAGTTTTTT GTGCTCAGGC AGGTGGACCG AGAACTTTGA TTCGTGGCGA CACAAATTCA TTCCCGTTTT TTCAGTGGAG TAGGCAGGTC GGTTGATCGA GGAGTTCGGA TTCCAGAAGT TTGTTTTAAG GAGGGGCTTC GATTATGACG ACTGTCACCA AGCAAAAATG CCAGAGAATT GGCTGCGATG TGATGTTTAC GGCCGATGAT AATCCTGAAG GTTCCTGCCG GTACCACCCT GGGCCCTTAT TTCACGACGG AGGGAAAGAA TGGAGTTGTT GCAAGCAACG TAGTCACGAC TTCAGTCTCT TCTTAGAGCT TCCAGGATGC AAAACTGGTC AACATACTTC TGAGAAACCT TTACCGAAGA TAGCTCCAAG TCCGAACAAG CCAGTCCCAG TCAATGTAAC CAGCGACGCA GCTGCAAGCG CCAATTGTAA TCGGTGCAGA CAGGGTTTCT ACTGCTCTGA TCATGGCTCA AGACTTCCAG TAAGAGTTTC AGCTCCTGCT CCAAAGGTGA CTCCTCTTGC AGCTGTTGAA AAGAAAGTAA ACGTACCTGC TCCTCGCAAA ATCGTGGACC TGAACGCAAA ACAGACCTGC AAAAACAAAG GCTGTGGTAA AGAGTTCACA GAAAAGGAGA ACACAGATAC TGCATGCAGT TTTCATCCAG GTCCCGCTAT ATTTCACGAC AGATCGAAAG GGTCTGTGTG CTTTGACAGT GGAAATGCTG TGATACTCAC GTGAAGGAAT TTGAGGAATT TTTGGAAATC CCCCCGTGTG CAAAGGGATG GCACAATGCA AATCCCGACG AAGTTTAGGA CTTACAAGGT TGTTAGGAGT TCCGGTGTGC TGAAAGTCGA CGAGTCCTGC CCAGCTCGCC AGCCCACTTT CTTCGGTCGA GCCGAGAAGA GTTTACGTGA AGCTGTCACA TCCCTCGGAC TTTTACCTGT CCCTCCTGAT CAGGGATCAG GCATTAATTA TAGATCTAGT GTAGGAGTAT TGGGCCGCTT GTGGAGCTTT CGAACTGCGA AGAATGATCT TTTCTCCAAG GCCAACTTCA TTTTAAGAAT CACAAATGTA TGCTCAAAAG ATTGTTTGTC GAGCTGTTCC GAGCGTTGAA AGCCTCGCAG AGGTTTTAGA GTATTACAGG AACAGACAAA CGTTTGAAGT TCGGAGCGCA ACGGTCGGTG TCTCCAGGAT TGTAAACACT GGGGATCTGA GCAATTGTAA TTGAAGATGT GGTGACATAT GGTTTTATG |
CDS |
| >Mp4g22990.2 ATGACGACTG TCACCAAGCA AAAATGCCAG AGAATTGGCT GCGATGTGAT GTTTACGGCC GATGATAATC CTGAAGGTTC CTGCCGGTAC CACCCTGGGC CCTTATTTCA CGACGGAGGG AAAGAATGGA GTTGTTGCAA GCAACGTAGT CACGACTTCA GTCTCTTCTT AGAGCTTCCA GGATGCAAAA CTGGTCAACA TACTTCTGAG AAACCTTTAC CGAAGATAGC TCCAAGTCCG AACAAGCCAG TCCCAGTCAA TGTAACCAGC GACGCAGCTG CAAGCGCCAA TTGTAATCGG TGCAGACAGG GTTTCTACTG CTCTGATCAT GGCTCAAGAC TTCCAGTAAG AGTTTCAGCT CCTGCTCCAA AGGTGACTCC TCTTGCAGCT GTTGAAAAGA AAGTAAACGT ACCTGCTCCT CGCAAAATCG TGGACCTGAA CGCAAAACAG ACCTGCAAAA ACAAAGGCTG TGGTAAAGAG TTCACAGAAA AGGAGAACAC AGATACTGCA TGCAGTTTTC ATCCAGGTCC CGCTATATTT CACGACAGAT CGAAAGGGTC TGTGTGCTTT GACAGTGGAA ATGCTGTGAT ACTCACGTGA |
Protein |
| >Mp4g22990.2 MTTVTKQKCQ RIGCDVMFTA DDNPEGSCRY HPGPLFHDGG KEWSCCKQRS HDFSLFLELP GCKTGQHTSE KPLPKIAPSP NKPVPVNVTS DAAASANCNR CRQGFYCSDH GSRLPVRVSA PAPKVTPLAA VEKKVNVPAP RKIVDLNAKQ TCKNKGCGKE FTEKENTDTA CSFHPGPAIF HDRSKGSVCF DSGNAVILT |