Mp5g04200
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR31982 | PHOTOSYSTEM I REACTION CENTER SUBUNIT II-1, CHLOROPLASTIC-RELATED |
| FunFam | G3DSA:3.30.1470.10:FF:000002 | Photosystem I reaction center subunit II |
| Pfam | PF02531 | PsaD |
| Gene3D | G3DSA:3.30.1470.10 | Photosystem I PsaD, reaction center subunit II |
| SUPERFAMILY | SSF64234 | Photosystem I subunit PsaD |
| KEGG | K02692 | photosystem I subunit II |
| MapolyID | Mapoly0141s0027 | - |
| GO | GO:0009522 | photosystem I |
| GO | GO:0015979 | photosynthesis |
| GO | GO:0009538 | photosystem I reaction center |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Putative photosystem I component (Mp5g04200); expression reduced in Mpcry mutants relative to wild type.
1 core 0 peripheral
Li, T., et al. (2021b)
· Cells research experimental subject
Putative photosystem I component (Mp5g04200); expression reduced in Mpcry mutants relative to wild type.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g04200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g04200.1 CCGACCGGCC CTCATCTCCT CAATTGCATT CGCAGCTCCG ATCGGTTGCA GAAATCGTTC AGCACTCTCG ATTGTGGTCG AAAGCCGGTC GCGCCATTCA ATAGCCTGAG AGATCGATCT CACATCTGCT TTGAACCCGC GAGATCAGAG CAGAGCAGAG CAGAGCAGAG CGATGGCATC CCTGGCTTGC ACTTCGGCTG TTGCAGCTGT GGCGGCCACC GGCCCCGTTG CCAAGATCGA GAATGGCAGC ACCAACGTCG CGAGGAGCCT GGCTATGGCT CCCCTCAAGG CCTCGTCCCT GCACGGTCAG AAGATGTCCG TGGCTTCGTC CGCTGCGCGC GTGACCATGG CCGCCGCTGG TAAGGCCCCC GCCGCCGAGG CTCCCGCTGG CTTCACCCCT CCAGAATTGA AGGCCGACAC TCCTTCCCCA ATCTTCGGTG GAAGCACAGG TGGTCTTCTC CGCAAGGCAC AGGTTGAGGA ATTCTACGTC ATCACATGGG ACTCGCCCAA GGAGCAGATT TTTGAGATGC CCACCGGAGG TGCCGCCATC ATGAGGTCCG GCCCCAACCT ACTGAAGCTC GCCAGGAAGG AGCAATGTTT GGCTTTGGGA ACCGCTCTCA GGACCAAGTT CAAGATCAAA TACCAGTTCT ACCGCGTCTT CCCCAACGGA GAGGTCCAAT ACTTGCACCC CAAGGACGGA GTCTACCCCG AGAAGGTTAA CGCTGGAAGG ACCGCTGTCG GATTCAACTC CAGGAGCATT GGAAAGAACA AGAACCCTGC TGAGATCAAG TTCGGAAAGG CCCCAGCCTT CGAATTATAG ATTGCCCCTG TGAGTGTAGT GTGATTCAAC TGTAATTATA TTTGTTTCAA TAAACAGATC TTCTTATGTG CACTACCATA TCTGTTTAAG GGAACAGTCC GGCCTCGGAA ATCATCTTCT GTAGAGTGTG TAGCTCAGTG AAACATTCCA GTATGTTTCA GGAAAGGTCA CAACCGTGTT TCTGGGAGCC AGGCACCAGC CCTTGGTTTG CCAGGTCCCG ACTAGCTCCA CTTTGGGGTT ACCATGATTT CTTGTAATTT GTCGAATTTT CATCGAAGAA ATTTTGTGTA CCAAAGTTGC AATTGCTCGC GTCTGGGTGA CAATACCTAA GTGACTCTGT ATTTTGTACA TTCGTATCCA TGTCTTAGAA GTTGGGCGTG ATTTGATTTG GGATCCACCT CTACATGTCT GTGAATCCTC TCCTGAACGT GCCTTCTGTA TCGAGGTACG CATCTCCCCA GTACAAGGCT CCCGGATATT TATTCTTGTC ACGTCCAGCA GTGACCGGGA AAGAGGAGAT TCTTGGATAC TCAGTAGCAT AATTAAGCAC ATACATCCAC TCTCATACTT GTGAAAATTG CTTGCACTGC GCTAATTGGA GTTTTGAAAG AGCAATGTTC CCCAGCATTA ACATACATTC ATACCTACGC CGGTTGTTTT TCCTTTGGAC GCTGTGACTG TAAACTTTTG AACAATTGTG AATACCAATT TCTCAAGCTA AAATAAGTAG CACATTTTGA AGTTGAATAT ACATCCTTTA CAATATATCA ATAAAAATTT GTGATCATCT AAATTTACTC CACTGGAAAA ATAAATCTAC AGTAAGAGAA ATGTCGAAAA AAATTGAGAA ACTATCATAC AGTATTTGAG TACGCTGGAG AGAAAAAACA GGCAGCGTCC CTTCAACCGC GCACAAATAT ATAATCTTCT G |
mRNA UTR + CDS |
| >Mp5g04200.1 CCGACCGGCC CTCATCTCCT CAATTGCATT CGCAGCTCCG ATCGGTTGCA GAAATCGTTC AGCACTCTCG ATTGTGGTCG AAAGCCGGTC GCGCCATTCA ATAGCCTGAG AGATCGATCT CACATCTGCT TTGAACCCGC GAGATCAGAG CAGAGCAGAG CAGAGCAGAG CGATGGCATC CCTGGCTTGC ACTTCGGCTG TTGCAGCTGT GGCGGCCACC GGCCCCGTTG CCAAGATCGA GAATGGCAGC ACCAACGTCG CGAGGAGCCT GGCTATGGCT CCCCTCAAGG CCTCGTCCCT GCACGGTCAG AAGATGTCCG TGGCTTCGTC CGCTGCGCGC GTGACCATGG CCGCCGCTGG TAAGGCCCCC GCCGCCGAGG CTCCCGCTGG CTTCACCCCT CCAGAATTGA AGGCCGACAC TCCTTCCCCA ATCTTCGGTG GAAGCACAGG TGGTCTTCTC CGCAAGGCAC AGGTTGAGGA ATTCTACGTC ATCACATGGG ACTCGCCCAA GGAGCAGATT TTTGAGATGC CCACCGGAGG TGCCGCCATC ATGAGGTCCG GCCCCAACCT ACTGAAGCTC GCCAGGAAGG AGCAATGTTT GGCTTTGGGA ACCGCTCTCA GGACCAAGTT CAAGATCAAA TACCAGTTCT ACCGCGTCTT CCCCAACGGA GAGGTCCAAT ACTTGCACCC CAAGGACGGA GTCTACCCCG AGAAGGTTAA CGCTGGAAGG ACCGCTGTCG GATTCAACTC CAGGAGCATT GGAAAGAACA AGAACCCTGC TGAGATCAAG TTCGGAAAGG CCCCAGCCTT CGAATTATAG ATTGCCCCTG TGAGTGTAGT GTGATTCAAC TGTAATTATA TTTGTTTCAA TAAACAGATC TTCTTATGTG CACTACCATA TCTGTTTAAG GGAACAGTCC GGCCTCGGAA ATCATCTTCT GTAGAGTGTG TAGCTCAGTG AAACATTCCA GTATGTTTCA GGAAAGGTCA CAACCGTGTT TCTGGGAGCC AGGCACCAGC CCTTGGTTTG CCAGGTCCCG ACTAGCTCCA CTTTGGGGTT ACCATGATTT CTTGTAATTT GTCGAATTTT CATCGAAGAA ATTTTGTGTA CCAAAGTTGC AATTGCTCGC GTCTGGGTGA CAATACCTAA GTGACTCTGT ATTTTGTACA TTCGTATCCA TGTCTTAGAA GTTGGGCGTG ATTTGATTTG GGATCCACCT CTACATGTCT GTGAATCCTC TCCTGAACGT GCCTTCTGTA TCGAGGTACG CATCTCCCCA GTACAAGGCT CCCGGATATT TATTCTTGTC ACGTCCAGCA GTGACCGGGA AAGAGGAGAT TCTTGGATAC TCAGTAGCAT AATTAAGCAC ATACATCCAC TCTCATACTT GTGAAAATTG CTTGCACTGC GCTAATTGGA GTTTTGAAAG AGCAATGTTC CCCAGCATTA ACATACATTC ATACCTACGC CGGTTGTTTT TCCTTTGGAC GCTGTGACTG TAAACTTTTG AACAATTGTG AATACCAATT TCTCAAGCTA AAATAAGTAG CACATTTTGA AGTTGAATAT ACATCCTTTA CAATATATCA ATAAAAATTT GTGATCATCT AAATTTACTC CACTGGAAAA ATAAATCTAC AGTAAGAGAA ATGTCGAAAA AAATTGAGAA ACTATCATAC AGTATTTGAG TACGCTGGAG AGAAAAAACA GGCAGCGTCC CTTCAACCGC GCACAAATAT ATAATCTTCT G |
CDS |
| >Mp5g04200.1 ATGGCATCCC TGGCTTGCAC TTCGGCTGTT GCAGCTGTGG CGGCCACCGG CCCCGTTGCC AAGATCGAGA ATGGCAGCAC CAACGTCGCG AGGAGCCTGG CTATGGCTCC CCTCAAGGCC TCGTCCCTGC ACGGTCAGAA GATGTCCGTG GCTTCGTCCG CTGCGCGCGT GACCATGGCC GCCGCTGGTA AGGCCCCCGC CGCCGAGGCT CCCGCTGGCT TCACCCCTCC AGAATTGAAG GCCGACACTC CTTCCCCAAT CTTCGGTGGA AGCACAGGTG GTCTTCTCCG CAAGGCACAG GTTGAGGAAT TCTACGTCAT CACATGGGAC TCGCCCAAGG AGCAGATTTT TGAGATGCCC ACCGGAGGTG CCGCCATCAT GAGGTCCGGC CCCAACCTAC TGAAGCTCGC CAGGAAGGAG CAATGTTTGG CTTTGGGAAC CGCTCTCAGG ACCAAGTTCA AGATCAAATA CCAGTTCTAC CGCGTCTTCC CCAACGGAGA GGTCCAATAC TTGCACCCCA AGGACGGAGT CTACCCCGAG AAGGTTAACG CTGGAAGGAC CGCTGTCGGA TTCAACTCCA GGAGCATTGG AAAGAACAAG AACCCTGCTG AGATCAAGTT CGGAAAGGCC CCAGCCTTCG AATTATAG |
Protein |
| >Mp5g04200.1 MASLACTSAV AAVAATGPVA KIENGSTNVA RSLAMAPLKA SSLHGQKMSV ASSAARVTMA AAGKAPAAEA PAGFTPPELK ADTPSPIFGG STGGLLRKAQ VEEFYVITWD SPKEQIFEMP TGGAAIMRSG PNLLKLARKE QCLALGTALR TKFKIKYQFY RVFPNGEVQY LHPKDGVYPE KVNAGRTAVG FNSRSIGKNK NPAEIKFGKA PAFEL |