Mp5g05310



Description

Annotation

Database ID Description
ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature.
PANTHER PTHR10353 GLYCOSYL HYDROLASE
PRINTS PR00131 Glycosyl hydrolase family 1 signature
SUPERFAMILY SSF51445 (Trans)glycosidases
Gene3D G3DSA:3.20.20.80 Glycosidases
Pfam PF00232 Glycosyl hydrolase family 1
FunFam G3DSA:3.20.20.80:FF:000020 Beta-glucosidase 12
KEGG K01188 beta-glucosidase [EC:3.2.1.21]
KEGG K05350 beta-glucosidase [EC:3.2.1.21]
KOG KOG0626 Beta-glucosidase, lactase phlorizinhydrolase, and related proteins; [G]
MapolyID Mapoly0027s0094 -
GO GO:0005975 carbohydrate metabolic process
GO GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO GO:0008422 beta-glucosidase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpGH1.4 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp5g05310.1 chr5:7335977..7344162 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp5g05310 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp5g05310 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.