Mp5g05390
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR32382 | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN |
| Pfam | PF02469 | Fasciclin domain |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain |
| SUPERFAMILY | SSF82153 | FAS1 domain |
| SMART | SM00554 | fasc_3 |
| MapolyID | Mapoly0027s0087 | - |
| GO | GO:0046658 | obsolete anchored component of plasma membrane |
Nomenclature
No gene symbols are registered for this gene.
Associated Literature (AI-based literature mining, Beta-version)
Fasciclin-like AGP; DEG in Mpccd7.
0 core 1 peripheral
Jibran, R., et al. (2024b)
· Frontiers in Plant Science research experimental background
Fasciclin-like AGP; DEG in Mpccd7.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g05390 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g05390.1 CGAGGATCAC ATCTCATGTT TCATCGAGTA TTTTTGAAGT TTGAGACCTG CCGACTTCAT TGTTCGGTGG GAGGGCAGCC TGGGATCTGT TCTGCAATCG AGTCACGATG GGTCCTCGAC GAGCAGCTCG GTCCGGCTTG ATGGCGTTGG CACTGTTGTG CTGCATTGTC GGAACATGCT CTCAAAGCAC TCATAAATTC AACATCACCA AGATGCTGTC AGGCCACCCG AGATTCAGCG TGTTCAGAGA GATGCTGAGT TCCCACGGCG TGGCGGCGGA GATCAATGGT CGAAAGTCCG TCACATTACT GGCTCCCGCC AACAATGTCA TGAGAGCCTT CCGGACCAGC AATAACAAGA CGGACGCTAT CAAAATCACC GATCTCCTCC GCTTTCATGT GCTGCTCACC TACTTTGACA TGGCAGAGCT CAGGGCCCTG AAGACGACCA ACTACACCTC CGTGACCACC CTTCTGCAGA CCACTGGAAG GGCCAGCGGA AACAATGGGT TCGTCAACAT CTACAATCTG AAGTCGCGTG TCAAACTTGG ACCTTCGGTT CCAGACTCCT CTTCCAACGT CACCGTGCTG GCTGGAGTTC AGAAGTCGCC TTTCGACGTC AGCATTATCG AGATTGATCA GGTTCTTCTG CCTGTGGGAT TCAACAATGC CTCAGGAGAC TTGATTGCAG TGCTGGACTC GTTCCAGGAG TTCACTCTCC TCATCAGCTA CCTCCAGGAA ACGAAAGTCG ACGCCGTGTT TGCAGAGAAG CAGGCGGAGG GAATCACAAT TTTCGCACCC AGGGACTCTG CTTTCAATTC TCTGGCCACT GGGTCCATCC AAACTCTCAG CCTCTCGGAA CAGAAACTTC TGCTGGAGTA CCATGCTCTC GATGGATATG AAAGTCTCGA CTCTCTGGAG ACTATGCTCA ACAAACCCAC TAAGACTTTA GCCTCGGCAG ACGCAGCAGG CTATATTCTC AACGTCAGCG CTACCCCTGG ACAGAGTACT GTGAGGCTGC GCACTGGAGT CTCTGTGGCG ACCGTCCTCG AAATTATTTA CGACGCGAAT CCTGTTACCA TGTACGCCAT AGACGAAGTT CTTCTTCCTC TTAACCTCTT CACACCTGCA CCTCTGGCTT CCCCAGCCCC TGCCCCTGCT CCCAAGAAAT CTGCAGTCAA GTCTCCCCCT GCTCATAAGG TTCCGGCGAC GGTAACACCA GATTCAGCCT CCTTGGCTGA AAGGAGCTTG TTGGTAACAA TGGCTGCTCT GATTTCATCA ACTCTTGCCG TCATTCTGTA ATCTGAGGTA TTTGGCTTCG ATAGAATGTA GAAAGTGGCC CCTCTTTGGC CAGGCTAAGC GCGATCTCCA TTGGATCTCC AGTGACGGAT TTACATTCAG ATAGATTTCA TTACTCTCTT ATCACATTCG AACATGCACT TACTGAAGGT CTTGTCATCT TGGTGCCTTA GTCCGCACAG AGCTCCTCGA TTTCATTATT CAGGCGGTCT TACACCCATG GTTTCGGAGT GTTATGTTCT ATTACTAGCT CCAAATTTTA CATGAAATTT ACTTTAGCAT TCGTGGGTTC ATGGTGGAAA CGACTTACTT ATAGATGATT AGGGGATTGA AAGCCGACAA CAAAGTTAAG CGGTGTTTCA TTTTCACATG TTTACAGTGT GAAAGATCTA TAGACAGTTT CTGCAGTTCA ACACATATGT CGACATTGTC TTCAACGACT GACATCGAAC TGAATGTCTA ATCCATGGGA CACATGGACT GTGGACTATG AGACGTGAGA TAGTGGAATA AGATACGAGA TAAGCATCCA GATATATATT CCAGTATGGT GTTCGTTAAT CATTCTTCCG TGTAGACTTG CGAGAAATCG AATCAAGAAA AACTCCGTAG TCCAAAATCA TAAAAAATAA TTGAAGTGCA ACTATCAGCT TCTTAATGTG GTTCACATTG CGCAGGTTTT GGAATGTTAT GATTGCATGT GTTTGGATTT CATCTCCCAC TTTTGCGTAT TTAATACACT GGCC |
mRNA UTR + CDS |
| >Mp5g05390.1 CGAGGATCAC ATCTCATGTT TCATCGAGTA TTTTTGAAGT TTGAGACCTG CCGACTTCAT TGTTCGGTGG GAGGGCAGCC TGGGATCTGT TCTGCAATCG AGTCACGATG GGTCCTCGAC GAGCAGCTCG GTCCGGCTTG ATGGCGTTGG CACTGTTGTG CTGCATTGTC GGAACATGCT CTCAAAGCAC TCATAAATTC AACATCACCA AGATGCTGTC AGGCCACCCG AGATTCAGCG TGTTCAGAGA GATGCTGAGT TCCCACGGCG TGGCGGCGGA GATCAATGGT CGAAAGTCCG TCACATTACT GGCTCCCGCC AACAATGTCA TGAGAGCCTT CCGGACCAGC AATAACAAGA CGGACGCTAT CAAAATCACC GATCTCCTCC GCTTTCATGT GCTGCTCACC TACTTTGACA TGGCAGAGCT CAGGGCCCTG AAGACGACCA ACTACACCTC CGTGACCACC CTTCTGCAGA CCACTGGAAG GGCCAGCGGA AACAATGGGT TCGTCAACAT CTACAATCTG AAGTCGCGTG TCAAACTTGG ACCTTCGGTT CCAGACTCCT CTTCCAACGT CACCGTGCTG GCTGGAGTTC AGAAGTCGCC TTTCGACGTC AGCATTATCG AGATTGATCA GGTTCTTCTG CCTGTGGGAT TCAACAATGC CTCAGGAGAC TTGATTGCAG TGCTGGACTC GTTCCAGGAG TTCACTCTCC TCATCAGCTA CCTCCAGGAA ACGAAAGTCG ACGCCGTGTT TGCAGAGAAG CAGGCGGAGG GAATCACAAT TTTCGCACCC AGGGACTCTG CTTTCAATTC TCTGGCCACT GGGTCCATCC AAACTCTCAG CCTCTCGGAA CAGAAACTTC TGCTGGAGTA CCATGCTCTC GATGGATATG AAAGTCTCGA CTCTCTGGAG ACTATGCTCA ACAAACCCAC TAAGACTTTA GCCTCGGCAG ACGCAGCAGG CTATATTCTC AACGTCAGCG CTACCCCTGG ACAGAGTACT GTGAGGCTGC GCACTGGAGT CTCTGTGGCG ACCGTCCTCG AAATTATTTA CGACGCGAAT CCTGTTACCA TGTACGCCAT AGACGAAGTT CTTCTTCCTC TTAACCTCTT CACACCTGCA CCTCTGGCTT CCCCAGCCCC TGCCCCTGCT CCCAAGAAAT CTGCAGTCAA GTCTCCCCCT GCTCATAAGG TTCCGGCGAC GGTAACACCA GATTCAGCCT CCTTGGCTGA AAGGAGCTTG TTGGTAACAA TGGCTGCTCT GATTTCATCA ACTCTTGCCG TCATTCTGTA ATCTGAGGTA TTTGGCTTCG ATAGAATGTA GAAAGTGGCC CCTCTTTGGC CAGGCTAAGC GCGATCTCCA TTGGATCTCC AGTGACGGAT TTACATTCAG ATAGATTTCA TTACTCTCTT ATCACATTCG AACATGCACT TACTGAAGGT CTTGTCATCT TGGTGCCTTA GTCCGCACAG AGCTCCTCGA TTTCATTATT CAGGCGGTCT TACACCCATG GTTTCGGAGT GTTATGTTCT ATTACTAGCT CCAAATTTTA CATGAAATTT ACTTTAGCAT TCGTGGGTTC ATGGTGGAAA CGACTTACTT ATAGATGATT AGGGGATTGA AAGCCGACAA CAAAGTTAAG CGGTGTTTCA TTTTCACATG TTTACAGTGT GAAAGATCTA TAGACAGTTT CTGCAGTTCA ACACATATGT CGACATTGTC TTCAACGACT GACATCGAAC TGAATGTCTA ATCCATGGGA CACATGGACT GTGGACTATG AGACGTGAGA TAGTGGAATA AGATACGAGA TAAGCATCCA GATATATATT CCAGTATGGT GTTCGTTAAT CATTCTTCCG TGTAGACTTG CGAGAAATCG AATCAAGAAA AACTCCGTAG TCCAAAATCA TAAAAAATAA TTGAAGTGCA ACTATCAGCT TCTTAATGTG GTTCACATTG CGCAGGTTTT GGAATGTTAT GATTGCATGT GTTTGGATTT CATCTCCCAC TTTTGCGTAT TTAATACACT GGCC |
CDS |
| >Mp5g05390.1 ATGGGTCCTC GACGAGCAGC TCGGTCCGGC TTGATGGCGT TGGCACTGTT GTGCTGCATT GTCGGAACAT GCTCTCAAAG CACTCATAAA TTCAACATCA CCAAGATGCT GTCAGGCCAC CCGAGATTCA GCGTGTTCAG AGAGATGCTG AGTTCCCACG GCGTGGCGGC GGAGATCAAT GGTCGAAAGT CCGTCACATT ACTGGCTCCC GCCAACAATG TCATGAGAGC CTTCCGGACC AGCAATAACA AGACGGACGC TATCAAAATC ACCGATCTCC TCCGCTTTCA TGTGCTGCTC ACCTACTTTG ACATGGCAGA GCTCAGGGCC CTGAAGACGA CCAACTACAC CTCCGTGACC ACCCTTCTGC AGACCACTGG AAGGGCCAGC GGAAACAATG GGTTCGTCAA CATCTACAAT CTGAAGTCGC GTGTCAAACT TGGACCTTCG GTTCCAGACT CCTCTTCCAA CGTCACCGTG CTGGCTGGAG TTCAGAAGTC GCCTTTCGAC GTCAGCATTA TCGAGATTGA TCAGGTTCTT CTGCCTGTGG GATTCAACAA TGCCTCAGGA GACTTGATTG CAGTGCTGGA CTCGTTCCAG GAGTTCACTC TCCTCATCAG CTACCTCCAG GAAACGAAAG TCGACGCCGT GTTTGCAGAG AAGCAGGCGG AGGGAATCAC AATTTTCGCA CCCAGGGACT CTGCTTTCAA TTCTCTGGCC ACTGGGTCCA TCCAAACTCT CAGCCTCTCG GAACAGAAAC TTCTGCTGGA GTACCATGCT CTCGATGGAT ATGAAAGTCT CGACTCTCTG GAGACTATGC TCAACAAACC CACTAAGACT TTAGCCTCGG CAGACGCAGC AGGCTATATT CTCAACGTCA GCGCTACCCC TGGACAGAGT ACTGTGAGGC TGCGCACTGG AGTCTCTGTG GCGACCGTCC TCGAAATTAT TTACGACGCG AATCCTGTTA CCATGTACGC CATAGACGAA GTTCTTCTTC CTCTTAACCT CTTCACACCT GCACCTCTGG CTTCCCCAGC CCCTGCCCCT GCTCCCAAGA AATCTGCAGT CAAGTCTCCC CCTGCTCATA AGGTTCCGGC GACGGTAACA CCAGATTCAG CCTCCTTGGC TGAAAGGAGC TTGTTGGTAA CAATGGCTGC TCTGATTTCA TCAACTCTTG CCGTCATTCT GTAA |
Protein |
| >Mp5g05390.1 MGPRRAARSG LMALALLCCI VGTCSQSTHK FNITKMLSGH PRFSVFREML SSHGVAAEIN GRKSVTLLAP ANNVMRAFRT SNNKTDAIKI TDLLRFHVLL TYFDMAELRA LKTTNYTSVT TLLQTTGRAS GNNGFVNIYN LKSRVKLGPS VPDSSSNVTV LAGVQKSPFD VSIIEIDQVL LPVGFNNASG DLIAVLDSFQ EFTLLISYLQ ETKVDAVFAE KQAEGITIFA PRDSAFNSLA TGSIQTLSLS EQKLLLEYHA LDGYESLDSL ETMLNKPTKT LASADAAGYI LNVSATPGQS TVRLRTGVSV ATVLEIIYDA NPVTMYAIDE VLLPLNLFTP APLASPAPAP APKKSAVKSP PAHKVPATVT PDSASLAERS LLVTMAALIS STLAVIL |