Mp5g05940
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR31832 | B-BOX ZINC FINGER PROTEIN 22 |
| ProSiteProfiles | PS50119 | Zinc finger B-box type profile. |
| Pfam | PF00643 | B-box zinc finger |
| CDD | cd19821 | Bbox1_BBX-like |
| FunFam | G3DSA:3.30.160.60:FF:000610 | B-box zinc finger protein 19 |
| Gene3D | G3DSA:3.30.160.60 | Classic Zinc Finger |
| SMART | SM00336 | bboxneu5 |
| MapolyID | Mapoly0027s0033 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0009640 | photomorphogenesis |
| GO | GO:0005634 | nucleus |
| GO | GO:0008270 | zinc ion binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpBBX1 | transcription factor, BBX | Published |
Associated Literature (AI-based literature mining, Beta-version)
B-box transcription factor; MpBBX1 and MpBBX5 act antagonistically to control thallus flatness downstream of light signaling.
1 core 1 peripheral
Roetzer J, Asper B, Meir Z, Edelbacher N, Merai Z, Datta S, Dolan L. (2026)
· Current biology : CB research experimental subject
B-box transcription factor; MpBBX1 and MpBBX5 act antagonistically to control thallus flatness downstream of light signaling.
Lagercrantz, U., et al. (2021)
· New Phytologist research experimental background
CONSTANS-like (Mp5g05940); rhythmic clock-output gene.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp5g05940 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp5g05940.1 GAATGTTGCG GACTTGATTG CGTTGGCGCC TCACGCTCGT CGAGTTTGCA AGTGAGTGGA GTCGGAACGT CGGTCTTGGA ATCGTTAATT TTTTATGTGG AGAGGAGAGT GAGAGGGCCA TCGATCGTCA AAATCCGCGC TAGTTCAGGT GCTGTGCGAG CGAGCGAGCT CCTGGGGATC TCGCCGGGAA ACACGAGAGA GTGGCTGCCA CCGCATGGTA TTATTATTCT TTCTACAGCC CACAACGGTC CCGCTTCGTT CGATCAGAGC ATGGCAACAG AAATTCCGGA CACGGTTTGT CGAGGTGGAG GTGGAGGAGG AGAAGTGTCG CGCTTCCCGT GAGTTGTGCA GGAAGTGGTT CCCTTCGTCC CACCTCCTGT TTCCCAGCGG AGGCATCTTG CGGTGCGATC GTTCACGAGC ACTGCAGCTC AGTCTTCCGC GCTAGTGCCT GCGCGAGTCC TGCGATCTTG GACCTTGTGT GTTTTCTGCT CGAGTGACCA AGAATGTGTT CGTTCGTTGG TGTGGTTCGC GATTCCTGAC GGTTTCGTTG CTTGAATCGT TGATGTTTCT TCACAGGAGG TTGGTGCACA CTTCGAGGCG GCCAGAGTCT GACTGGAAGC AACCGAACAC GAGAAACGGC AGTTTGTAGA ATCTGGATGG TCGCATGCTC TTGCTGCTTG AAGCGCTCTG CGAGTTCGTG GGAGGCAGGA AGCAGGAAGG TGTTTGCTCA GCATAGGTTG GTAGAAATCG AGGACAATTA GGAAACGGAC CTTGCGCAGA ATGTCAATGT ATCACGGTGT GAGACGTCTG ATAGCTGTCA CCGGGAGGAG TAGCTCGAAT TTTGGGGTGC AGGAGTTTGG GAGTGCGACC GTAGAGGAAC AGATCAAGGG ATAGTTGGCG GAAAGTTCAA ATTGTTTTGG AGTGGATAGC AGAAACCCAT AGACGCAGAT GCGGACTCTT TGTGATGTTT GCGAGGCAGC GCCCGCGCGA CTTTTTTGTG CCGCCGACGA GGCTGCACTG TGCTTGACAT GTGATGAGAA GGTACCTTCT CGCGGACATT GTTTCTTCTG CATAGTTCTT TGTTCAACTC TCTGGCAGAA TTTTGATCAT CCTATTTTTC GTGGAAATTG ACATTGCCTG TACGGGCGTG TTCTGGTCGA TCCACGCTAC GAATCAAGGA TTGTGACAAG GTGATAGTCC GACGTCAGTA CCTGCTGGTC TGGCCTCTCG AGGAAACTTT AACTCCGGGT CTAAGGAGGA GACTTCATCT GGATAGGAAG TGCTTTCCCA CAATGGTGGA CTCGAAGCTT AGGCTGGGTT GGAGTACTAA CAGTTCTTCG TTTTCTCCTC TAGGACAGAA TTTTACACTG GTCACGACGT TGTGTTGGCA AATCCCTCGC GTTGTCGAAA GAACGCCCTT TCTTCAATGA ATGTCAGGGC ATTAGCCATC GTCGAAATTG TCCCTCAGTG CTTCTGCTCA GGAACGAACG GTTTATTCCG TTCGTGACCA GCTACTGCTC GTCGGCCACC GGTGTGTAGA CTGTAGCCAT GAGCATAGTC TCTAAAATAG TTTGAGAAGT GAGTGAGTCC ACCATGTCGC ACAACGTGCA ATCCTTGCCG GCAGCGTAGA AGGAAATAAA TAAATATCTC ATGTCCGGCG GGGCGGTCAC TACCAGCTTT TTTTTGGCCA CTTGCGACTT GGGATTGAGA GCGTTCTCTC CCGGCATCAA GCTTCAGAGT AGTGGTTACG GACATCGGCC AGAACTAGAC GACTCTTCTA AGTCAATTGA CAAACTTATC AGTTTATGGT CATCTCTACA TGTAGGTACA TGGATGCAAC AAATTGGCCA GTAGACACGT GCGGCTGGAG CTCGCCGAAG CGCGGGCAGT GCCACGCTGT GACATCTGCG AGAACGCCCC CGGTACACTA AACTTTCCTT CACAGAATGT GCCACCTCGG CCTCATTTCT TCCACGAAAC TATTTGTGCT TGTAGTTGTC AGTTAGATCT CACGTGTGAT ACTTGTAGTA CATTTAAGAC ATCGGATTTT TGGAAACTCG AAGGTCCAGT CAGACAGTGT TATCTCATCG GAGATACTGT TAGGGTTCAA TTAGGTTGAT TATTGCCCGT TCCATTGTTG TGCAGCCTTT TTTTTTTGTG GCATTGATGG TACCTCGTTA TGCCTACAAT GCGACATGGA TGTGCACATC GGGGGAAAAA AGACCCACGA ACGCTATTTG TTGATGGGGC AACGCGTTGA GGTTCGTAAT TTGAGTTGAT TTCAATTATA CCTGCTTGTT CGTCTAAGAA GTGGACGCGA ATGTTACTTC GCTCGTTGTG TTGTCTGAAA TTGTTCTTTA TTATTCAAAG TTTAGTTCAT GTATAGTGCA AAGGGATTTG AAACGAACTT GATTAGAAAT GAACTCGATA AACCATTGAA ATAAATTTGA AGATCACTCT GATAAACTTG TACGTATGTT TTGGGACGTG GAGTTCATAT AGTAAGTACC ATTGTGTGTT GATAATTTAT GATGTGAATG TTGTTTTGTT CCGATCGAGC TCTGAAAATT ATTTAGCTAA AGATAAGAAG GCGCGTATGT TCGTATGAAC GAACATATTG TAGTTCGAGG ACAAGGACCT GAGACTCGCT GGCCTGACAT GTTACGGACA GATGTTTATG TTGAGGTGAA GTTGAAATCT CAGTCACAAA CTCATTTTTT AGTCGTGACA ACTGCCTACA GTTACCCACG AAGCCACGCC AGGATGATCT TGCAGCAGTG AAAGACGGTG CAACAAAGGA CGGGAAGAAA TCCAAGGATG GAAACGAACA CATTCACCAT CACCACCACC ACCACCATCA TCATCACCAT CACCATGAAG GACAACAGGA CAAGACCAAA CCTGTCACAA GTGGAGAATG GAATAACAGC AATGCACCTG CCGTAGCCAT TGCCGTAGGT GACGAGGATT TGCAGTCACC CACGAATCGT CGGGTGTCGC GGATGATAGA TCTGAACACA AGGCCAGCAC ATTTACAGCA ATTGGCACAT ACCAGCAAGG TATCTACCTC TAGAATATTC TCATCTTGTG GTCTTCTGTA ATCGTCAGTC TGATTCAGTT TTTTGAGGTT CATTCACAAT TAGAGATCAA ATACGACGTC TGATCCTTGT CCAAAGCAAG CAGCGCAAAT GTTGACATGT TGAGTACTGC TGGACATCAA AATTGTTTGA CGGAGTTTGA GCACACATAT TCCATAATTA CAATCGCAGC TATGTACTCA TTTCATTCGA AAGATAGAAC AGGCTTTTTT TTTTTTTTTT GGGTACAGTG TAAACGCTGG AGTCGAATCT ATCTAGTGCA GCATAACTTA CATATACTGG GAATGTCTCG TCAATTCTTA CTGGTTGTCC TGTCATTGCA GGACCAGGAG CTGGCCAGCA GTGACGACGA ATGTGTTGGA GTTGTCCCCG AGATGGCCCC AAGATCGTCA TCAGAAAATT CGGAGGAATA ATCGGCTAAT TGGTTCATAT TCCATTCTCT GTTGTCTTCC ATAAATGAGG TTAACAATTC TGTAACAAAA GCTTCACCTC TTTTTTCTAG AATGACCTTT TCAATCGGTA GTTCCTTAGT CAAGGAACCA GTTGAGTAGA ATAGAGATGG GTACATGTTT TCAGACTGCC AACTACCGCC ATGCATTTGC AATTTAGTGT TATTATATTC CGCGGCATCT TTTTTAGCAC TGATACTCCT TTTTGAGTTG TTGTCGCTCC TCTATCTCAG TTGCCGCTTG GCAGTGTCTT GTCTTCTGAA GAATGAAAGG TGGAGGAGAT TCCTCAGTCG AATCCTGATA TGTGCTGAGA TGTGGACTCC AATGGTTAAA ATGGAAGGGT TAATGCACCA ATTTTTTAGG CACATGAATC TTGGAAGATC AGGATGTTGT CAAATGAGGA CGTAAGCTCT GTTTGAAACT TTTAGGAAAA GTCTAGTTTA GAACGCAGTC ATTGGATCTG TAGAGATGTG CCAAGTCGCT TACATGTTCG CTCGTGAACA CACAAAGCTA TTAAATCAGC TGGGCACATG ATTTTAGAAG GTCTTGTTTG GACCTCCTCA TCTTTGGGTA GTTCTGGGGA AGATCAAGAA GATCGTGTAA AAAGTCTCAA GCTATACGTT TGTATAGAGA GCACAGAGAA AGGTTTTATT TCTTTCACAA TTCCAGGCAC CTTTCAGTCG TTCATCCCCC AATCTTTTAT TTGTGAGGGT CGGGGGACAT TAACAGGTTG TGCTCAAGAT CATTTCAATA GTACCTCTCA TGTTAATTGG G |
mRNA UTR + CDS |
| >Mp5g05940.1 GAATGTTGCG GACTTGATTG CGTTGGCGCC TCACGCTCGT CGAGTTTGCA AGTGAGTGGA GTCGGAACGT CGGTCTTGGA ATCGTTAATT TTTTATGTGG AGAGGAGAGT GAGAGGGCCA TCGATCGTCA AAATCCGCGC TAGTTCAGGT GCTGTGCGAG CGAGCGAGCT CCTGGGGATC TCGCCGGGAA ACACGAGAGA GTGGCTGCCA CCGCATGGAG GTTGGTGCAC ACTTCGAGGC GGCCAGAGTC TGACTGGAAG CAACCGAACA CGAGAAACGG CAGTTTGTAG AATCTGGATG GTCGCATGCT CTTGCTGCTT GAAGCGCTCT GCGAGTTCGT GGGAGGCAGG AAGCAGGAAG GTGTTTGCTC AGCATAGGTT GGTAGAAATC GAGGACAATT AGGAAACGGA CCTTGCGCAG AATGTCAATG TATCACGGTG TGAGACGTCT GATAGCTGTC ACCGGGAGGA GTAGCTCGAA TTTTGGGGTG CAGGAGTTTG GGAGTGCGAC CGTAGAGGAA CAGATCAAGG GATAGTTGGC GGAAAGTTCA AATTGTTTTG GAGTGGATAG CAGAAACCCA TAGACGCAGA TGCGGACTCT TTGTGATGTT TGCGAGGCAG CGCCCGCGCG ACTTTTTTGT GCCGCCGACG AGGCTGCACT GTGCTTGACA TGTGATGAGA AGGTACATGG ATGCAACAAA TTGGCCAGTA GACACGTGCG GCTGGAGCTC GCCGAAGCGC GGGCAGTGCC ACGCTGTGAC ATCTGCGAGA ACGCCCCCGC CTTTTTTTTT TGTGGCATTG ATGGTACCTC GTTATGCCTA CAATGCGACA TGGATGTGCA CATCGGGGGA AAAAAGACCC ACGAACGCTA TTTGTTGATG GGGCAACGCG TTGAGTTACC CACGAAGCCA CGCCAGGATG ATCTTGCAGC AGTGAAAGAC GGTGCAACAA AGGACGGGAA GAAATCCAAG GATGGAAACG AACACATTCA CCATCACCAC CACCACCACC ATCATCATCA CCATCACCAT GAAGGACAAC AGGACAAGAC CAAACCTGTC ACAAGTGGAG AATGGAATAA CAGCAATGCA CCTGCCGTAG CCATTGCCGT AGGTGACGAG GATTTGCAGT CACCCACGAA TCGTCGGGTG TCGCGGATGA TAGATCTGAA CACAAGGCCA GCACATTTAC AGCAATTGGC ACATACCAGC AAGGACCAGG AGCTGGCCAG CAGTGACGAC GAATGTGTTG GAGTTGTCCC CGAGATGGCC CCAAGATCGT CATCAGAAAA TTCGGAGGAA TAATCGGCTA ATTGGTTCAT ATTCCATTCT CTGTTGTCTT CCATAAATGA GGTTAACAAT TCTGTAACAA AAGCTTCACC TCTTTTTTCT AGAATGACCT TTTCAATCGG TAGTTCCTTA GTCAAGGAAC CAGTTGAGTA GAATAGAGAT GGGTACATGT TTTCAGACTG CCAACTACCG CCATGCATTT GCAATTTAGT GTTATTATAT TCCGCGGCAT CTTTTTTAGC ACTGATACTC CTTTTTGAGT TGTTGTCGCT CCTCTATCTC AGTTGCCGCT TGGCAGTGTC TTGTCTTCTG AAGAATGAAA GGTGGAGGAG ATTCCTCAGT CGAATCCTGA TATGTGCTGA GATGTGGACT CCAATGGTTA AAATGGAAGG GTTAATGCAC CAATTTTTTA GGCACATGAA TCTTGGAAGA TCAGGATGTT GTCAAATGAG GACGTAAGCT CTGTTTGAAA CTTTTAGGAA AAGTCTAGTT TAGAACGCAG TCATTGGATC TGTAGAGATG TGCCAAGTCG CTTACATGTT CGCTCGTGAA CACACAAAGC TATTAAATCA GCTGGGCACA TGATTTTAGA AGGTCTTGTT TGGACCTCCT CATCTTTGGG TAGTTCTGGG GAAGATCAAG AAGATCGTGT AAAAAGTCTC AAGCTATACG TTTGTATAGA GAGCACAGAG AAAGGTTTTA TTTCTTTCAC AATTCCAGGC ACCTTTCAGT CGTTCATCCC CCAATCTTTT ATTTGTGAGG GTCGGGGGAC ATTAACAGGT TGTGCTCAAG ATCATTTCAA TAGTACCTCT CATGTTAATT GGG |
CDS |
| >Mp5g05940.1 ATGCGGACTC TTTGTGATGT TTGCGAGGCA GCGCCCGCGC GACTTTTTTG TGCCGCCGAC GAGGCTGCAC TGTGCTTGAC ATGTGATGAG AAGGTACATG GATGCAACAA ATTGGCCAGT AGACACGTGC GGCTGGAGCT CGCCGAAGCG CGGGCAGTGC CACGCTGTGA CATCTGCGAG AACGCCCCCG CCTTTTTTTT TTGTGGCATT GATGGTACCT CGTTATGCCT ACAATGCGAC ATGGATGTGC ACATCGGGGG AAAAAAGACC CACGAACGCT ATTTGTTGAT GGGGCAACGC GTTGAGTTAC CCACGAAGCC ACGCCAGGAT GATCTTGCAG CAGTGAAAGA CGGTGCAACA AAGGACGGGA AGAAATCCAA GGATGGAAAC GAACACATTC ACCATCACCA CCACCACCAC CATCATCATC ACCATCACCA TGAAGGACAA CAGGACAAGA CCAAACCTGT CACAAGTGGA GAATGGAATA ACAGCAATGC ACCTGCCGTA GCCATTGCCG TAGGTGACGA GGATTTGCAG TCACCCACGA ATCGTCGGGT GTCGCGGATG ATAGATCTGA ACACAAGGCC AGCACATTTA CAGCAATTGG CACATACCAG CAAGGACCAG GAGCTGGCCA GCAGTGACGA CGAATGTGTT GGAGTTGTCC CCGAGATGGC CCCAAGATCG TCATCAGAAA ATTCGGAGGA ATAA |
Protein |
| >Mp5g05940.1 MRTLCDVCEA APARLFCAAD EAALCLTCDE KVHGCNKLAS RHVRLELAEA RAVPRCDICE NAPAFFFCGI DGTSLCLQCD MDVHIGGKKT HERYLLMGQR VELPTKPRQD DLAAVKDGAT KDGKKSKDGN EHIHHHHHHH HHHHHHHEGQ QDKTKPVTSG EWNNSNAPAV AIAVGDEDLQ SPTNRRVSRM IDLNTRPAHL QQLAHTSKDQ ELASSDDECV GVVPEMAPRS SSENSEE |